mRNA_M-pyrifera_M_contig83191.19432.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A7S0K6I8_CAFRO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K6I8_CAFRO) HSP 1 Score: 155 bits (392), Expect = 2.900e-44 Identity = 75/129 (58.14%), Postives = 104/129 (80.62%), Query Frame = 1 Query: 7 EMQTSGEMSL--ISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLL-EPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPEPLTR 384 +M T+ + L + +D +GF+VN+++MRGSV+ P+F+LLWDVQ + DISP SLSPV +L EP IR+LL+GTG+ MRN+NP L+G+FSRRG+A+E M+ HA+STFN+L REGR VAAALLS +P++R Sbjct: 34 DMMTNRDAGLTDLQSWDEFGFRVNNIYMRGSVVCLPKFTLLWDVQHVSDISPESLSPVLMLREPRIRILLIGTGKKMRNVNPALFGWFSRRGIAVEHMSTKHALSTFNVLNREGRGVAAALLSRKPVSR 162
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A5A8CUM3_CAFRO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUM3_CAFRO) HSP 1 Score: 154 bits (390), Expect = 2.410e-43 Identity = 75/128 (58.59%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 10 MQTSGEMSL--ISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLL-EPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPEPLTR 384 M T+ + L + +D +GF+VN+++MRGSV+ P+F+LLWDVQ + DISP SLSPV +L EP IR+LL+GTG+ MRN+NP L+G+FSRRG+A+E M+ HA+STFN+L REGR VAAALLS +P++R Sbjct: 1 MMTNRDAGLTDLQSWDEFGFRVNNIYMRGSVVCLPKFTLLWDVQHVSDISPESLSPVLMLREPRIRILLIGTGKKMRNVNPALFGWFSRRGIAVEHMSTKHALSTFNVLNREGRGVAAALLSRKPVSR 128
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A813BYD1_9DINO (Ndufaf3 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BYD1_9DINO) HSP 1 Score: 148 bits (373), Expect = 3.040e-43 Identity = 67/118 (56.78%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 31 SLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPEPLTR 384 +++ G+D +G+KVN ++MRGSVL FP F+LLWDVQ + D++ SLSPV + P +R+LL+GTGE M+N+NP LYG+FS++GVA+E M++ +AM+TFN+L +EGR AAALLS +PL R Sbjct: 6 TVVDGWDDYGYKVNGIYMRGSVLCFPSFTLLWDVQQIADVTHESLSPVLMFAPRVRVLLIGTGEEMQNVNPLLYGHFSKQGVAVEHMSSDNAMATFNVLNQEGRPAAAALLSRKPLPR 123
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A482RKF2_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RKF2_9ARCH) HSP 1 Score: 113 bits (282), Expect = 1.860e-27 Identity = 70/187 (37.43%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 31 SLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEP----------------------------------AIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTN-----------------------------------AHAMSTFNLLVREGRDVAAALLSPEPLTR 384 S I G D++GF VN + MRGSVLVFP F+LLWDVQ I P SL+PVH++ P + L+LVGTG+ N+NP LY YFSRRG+A+EPM+ AHA++ FN+L EGR VAAAL+S +P++R Sbjct: 99 SRIGGADAYGFLVNGIAMRGSVLVFPTFALLWDVQHAHAICPRSLAPVHMVSPQPGANLPPVRRRARMTRFHLQHSHTPRVLVLWANSAELVLVGTGDQSVNLNPSLYAYFSRRGIAVEPMSTVGSSTSARTCQHGTSHHGRSSPAPDPRAVRSRTLQAHAIAEFNVLNEEGRMVAAALISRQPMSR 285
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A0D2WX21_CAPO3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WX21_CAPO3) HSP 1 Score: 101 bits (251), Expect = 6.440e-25 Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 34 LISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPEPLT 381 LI + S GF VN V GS+ +FPR LLW+V+++E+++P SL+ HL+ P I LLL+GTG + I+P + + +++E + HA +TFN L +EGR VAAAL+ P T Sbjct: 21 LIDSFSSMGFTVNGVTYVGSMALFPRVPLLWNVKSVEELTPESLTLFHLVNPKIELLLIGTGSKIETIDPAVRQMLKEKRISLEVLDTPHAATTFNFLSQEGRLVAAALIPIAPET 136
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: A0A7S0NEW1_9CRYP (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NEW1_9CRYP) HSP 1 Score: 102 bits (253), Expect = 3.290e-24 Identity = 46/119 (38.66%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 7 EMQTSGEMSLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALL 363 + T +++++ Y+ +G VN V + G+VL+ P S LW+V +LEDI+P SL + ++ P I + ++GTG+ R +PEL +FS +G++++ M + +A +TFN+L +EGR+ AAA L Sbjct: 95 DSSTLNDLTVVQSYNQYGVVVNGVILPGAVLLLPETSFLWNVNSLEDITPDSLKVLTMVTPRIEVCILGTGKRTRRPSPELISWFSSQGISLDFMDSVNAFATFNVLTQEGRNAAAACL 213
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: L1J926_GUITC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J926_GUITC) HSP 1 Score: 92.8 bits (229), Expect = 1.150e-21 Identity = 44/115 (38.26%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 28 MSLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPE 372 M+++ Y+ +G VN+V + G+VL+ P+ S LW+V ++EDI+ SL + +L P I + ++GTG R EL +F +G++++ M + +A +TFN+L +EGR AAA L E Sbjct: 1 MTVVQSYNQYGIVVNNVILPGAVLLLPKTSFLWNVNSMEDITVDSLKVLTMLSPRIEVCILGTGNRTRRPPAELISWFGDQGISLDFMDSVNAFATFNVLTQEGRVAAAACLPVE 115
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: NDUF3_XENTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Xenopus TaxID=8353 RepID=NDUF3_XENTR) HSP 1 Score: 92.4 bits (228), Expect = 5.330e-21 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 19 SGEMSLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLSPE 372 S E I Y S GF +N + G V P+ L W+V + +DI+ SLS H+L P I +L+VGTG+ + ++P + + ++GVA+E A+A +TFN LV E R AAAL+ P+ Sbjct: 59 SAEFMFIETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTGDRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIPPQ 176
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: V6EYG3_MAGGM (Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=V6EYG3_MAGGM) HSP 1 Score: 90.5 bits (223), Expect = 6.690e-21 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 19 SGEMSLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLS 366 S E LI GY GF ++ + GSVL+ PR +L W VQ+ D++ +L P+ +P +L++G G +M + L G+ +EPM + A T+N+L+ EGRDVAAA+++ Sbjct: 8 SSEFQLIGGYGDGGFSISGIRHEGSVLILPRRTLSWTVQSASDVALENLQPIIGADPRPAILILGCGRSMAPVPRALRDALRGHGIVVEPMDSGAACRTYNVLLTEGRDVAAAIIA 123
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Match: UPI00187BB33E (Mth938-like domain-containing protein n=1 Tax=Sneathiella sp. P13V-1 TaxID=2697366 RepID=UPI00187BB33E) HSP 1 Score: 90.5 bits (223), Expect = 6.870e-21 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 34 LISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSSLSPVHLLEPAIRLLLVGTGETMRNINPELYGYFSRRGVAIEPMTNAHAMSTFNLLVREGRDVAAALLS 366 LI+GY GF+++ V GSVLVFP+ + WD+ ++E+++ L V +PA+ +LL+G G M I+ + F G+ I+ M + AM T+N+L+ EGR VAAAL++ Sbjct: 14 LINGYGDGGFRISGVRHEGSVLVFPKETQAWDLTSIEELTLDHLKAVKEADPAVEILLIGCGANMAFIDEAIRNDFRAAGIVIDSMDSGAAMRTYNVLLLEGRRVAAALIA 124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83191.19432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83191.19432.1 >prot_M-pyrifera_M_contig83191.19432.1 ID=prot_M-pyrifera_M_contig83191.19432.1|Name=mRNA_M-pyrifera_M_contig83191.19432.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MQTSGEMSLISGYDSWGFKVNDVHMRGSVLVFPRFSLLWDVQTLEDISPSback to top mRNA from alignment at M-pyrifera_M_contig83191:17..400+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83191.19432.1 ID=mRNA_M-pyrifera_M_contig83191.19432.1|Name=mRNA_M-pyrifera_M_contig83191.19432.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig83191:17..400+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83191:17..400+ >mRNA_M-pyrifera_M_contig83191.19432.1 ID=mRNA_M-pyrifera_M_contig83191.19432.1|Name=mRNA_M-pyrifera_M_contig83191.19432.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig83191:17..400+ (Macrocystis pyrifera P11B4 male)back to top |