mRNA_M-pyrifera_M_contig8319.19431.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8319.19431.1
Unique NamemRNA_M-pyrifera_M_contig8319.19431.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A6H5JQU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU0_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 9.090e-88
Identity = 122/144 (84.72%), Postives = 134/144 (93.06%), Query Frame = 1 
Query:    1 RLEAIDVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            RL+  +VY+KLGEIF+GLS+FSLFFVL L +KGLY PSTDD G+NG+FLQ+YWWGTELYPRVFGAD+KMFTNCRFGMMYWAVGAVIYAY QQ + G LSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAG+YLCWGCLV
Sbjct:  158 RLDPKNVYDKLGEIFTGLSVFSLFFVLLLTVKGLYFPSTDDSGSNGSFLQNYWWGTELYPRVFGADVKMFTNCRFGMMYWAVGAVIYAYTQQQMYGKLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGYYLCWGCLV 301
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: D8LNF6_ECTSI (Sterol delta-7 reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF6_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 8.080e-86
Identity = 122/144 (84.72%), Postives = 134/144 (93.06%), Query Frame = 1 
Query:    1 RLEAIDVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            RL+  +VY+KLGEIF+GLS+FSLFFVL L +KGLY PSTDD G+NG+FLQ+YWWGTELYPRVFGAD+KMFTNCRFGMMYWAVGAVIYAY QQ + G LSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAG+YLCWGCLV
Sbjct:  206 RLDPKNVYDKLGEIFTGLSVFSLFFVLLLTVKGLYFPSTDDSGSNGSFLQNYWWGTELYPRVFGADVKMFTNCRFGMMYWAVGAVIYAYTQQQMYGKLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGYYLCWGCLV 349
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A835YQ61_9STRA (Sterol delta-7 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ61_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.090e-66
Identity = 100/139 (71.94%), Postives = 114/139 (82.01%), Query Frame = 1 
Query:   19 VYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTF-LQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            VY+KLGEI SGL +FSL F  ALY KGLYAPST D GTNG   L+DY+WGTELYPRV G D+K FTNCRFGMM+WAVG + YA+ Q    G++S SMAVSV+LQL YI KFFHWEMGYM +MDIQHDRAG+Y+CWGCLV
Sbjct:  150 VYDKLGEILSGLCVFSLAFCAALYFKGLYAPSTRDSGTNGAGPLKDYFWGTELYPRVLGWDVKQFTNCRFGMMFWAVGLLCYAHRQAREHGAVSDSMAVSVLLQLVYIAKFFHWEMGYMCTMDIQHDRAGYYICWGCLV 288
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A7S3JXB1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXB1_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.340e-59
Identity = 83/139 (59.71%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:   16 DVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            D+Y+ +G + S +++F+L F L L +KG +APS+ D G+ G+++ DY+WGTELYPRVFG D+K+FTNCRFGMM+WA+G + YA+AQ    G +S+S+ VS+ LQL YITKFF WE GY+ SMDIQHDRAG+Y+CWGCLV
Sbjct:  145 DIYHLMGHLLSSMNIFALLFCLFLTIKGYFAPSSTDAGSTGSWVVDYYWGTELYPRVFGWDVKLFTNCRFGMMFWALGIISYAHAQYQHIGYISNSILVSIALQLVYITKFFWWETGYLCSMDIQHDRAGYYICWGCLV 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: W7TQE9_9STRA (7-dehydrocholesterol reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQE9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.060e-58
Identity = 86/138 (62.32%), Postives = 112/138 (81.16%), Query Frame = 1 
Query:   19 VYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            VY+ +GE+ S +++FSL F L L +KGL  PS+ D G++G ++ D++WGTELYPRV G D+KMFTNCRFGMM+WA+G + YA AQ   +G LS++M VSV+LQL YITKFF+WE GY+ SMDIQHDRAG+Y+CWGCLV
Sbjct:  141 VYHHMGELLSAMNVFSLAFCLFLLVKGLTFPSSSDSGSSGNWVIDFYWGTELYPRVLGFDLKMFTNCRFGMMFWALGILCYAQAQAEKDGFLSNAMLVSVLLQLIYITKFFYWETGYLCSMDIQHDRAGYYICWGCLV 278
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A7R9UCM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCM9_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.000e-58
Identity = 90/136 (66.18%), Postives = 99/136 (72.79%), Query Frame = 1 
Query:   19 VYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGC 426
            VY+K GEI S L++FSL F   L LKG YAPS+ DCGTN  ++ DY+WG ELYPRV G DIK FTNCRFGMMYWAVG + YA  Q      LS SM V V LQL YI KFF WE GY  SMDIQHDRAG+YLCWGC
Sbjct:  173 VYDKFGEILSSLNIFSLVFCFLLMLKGYYAPSSSDCGTNNNWVLDYFWGVELYPRVLGWDIKTFTNCRFGMMYWAVGILCYAAKQIEDMNYLSDSMFVCVSLQLIYIAKFFWWESGYWCSMDIQHDRAGYYLCWGC 308
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A7S4DW51_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DW51_9EUKA)

HSP 1 Score: 195 bits (495), Expect = 6.460e-58
Identity = 85/138 (61.59%), Postives = 104/138 (75.36%), Query Frame = 1 
Query:   16 DVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCL 429
            +VY+K GEI + L+LF+L F   L  KG Y PST D G+ G  + D++WGTELYPRV G D+K FTNCRFGMMYWA+G + YA+ Q  + G +S SM VSV+LQL Y+TKFF WE GY  SMDIQHDRAG+Y+CWGCL
Sbjct:  149 EVYDKFGEILAALNLFALIFCTFLTFKGHYFPSTADSGSTGNTVLDFYWGTELYPRVLGWDLKQFTNCRFGMMYWAIGPIAYAWKQYEMYGHVSDSMIVSVVLQLVYVTKFFWWETGYFCSMDIQHDRAGYYICWGCL 286
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A7S2XXP5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXP5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.940e-57
Identity = 87/137 (63.50%), Postives = 106/137 (77.37%), Query Frame = 1 
Query:   19 VYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCL 429
            +Y++ GE  S +  FSL F L LY KGLY PST D G++G FL DY+ GTELYPR+ G DIK+FTNCRFGMM+WA+G + +A+ Q    G ++ SM V+V LQL YITKFFHWEMGYM +MDIQHDRAGFYLC+GCL
Sbjct:  152 IYDRFGEFMSAIQSFSLLFCLFLYFKGLYFPSTKDSGSSGNFLVDYFAGTELYPRILGFDIKLFTNCRFGMMFWALGIICFAHKQYMDLGYVTDSMMVNVALQLLYITKFFHWEMGYMCTMDIQHDRAGFYLCYGCL 288
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A7S3GQ32_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ32_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.570e-57
Identity = 85/139 (61.15%), Postives = 107/139 (76.98%), Query Frame = 1 
Query:   19 VYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGS-LSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            VY+KLG I S L++F+L F   L +KGL  PST D GTNG+ + D++WGTELYPR+FG D+K FTNCRFG+MYW VG + YA+ Q  L G  +SSSM +SV+LQ  Y+ KF++WE GY  SMDIQHDRAG+Y+CWGCLV
Sbjct:  141 VYDKLGHILSALNVFALGFCTMLTVKGLTFPSTKDSGTNGSLVIDFFWGTELYPRIFGFDVKQFTNCRFGLMYWQVGIICYAFKQYELLGGHVSSSMVISVVLQTVYLFKFYYWETGYFCSMDIQHDRAGYYICWGCLV 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Match: A0A6V1WQP4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WQP4_HETAK)

HSP 1 Score: 191 bits (486), Expect = 1.240e-56
Identity = 85/144 (59.03%), Postives = 112/144 (77.78%), Query Frame = 1 
Query:    4 LEAIDVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQDYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQ-QNLEGSLSSSMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV 432
            L+   VY++ G + + + LF+L F   LYLKG YAPST D G+NG+ + DY+WG ELYPR+ G D+KMFTNCRFGMM WA+  + +AY Q Q+L G +S+SMA++V+LQL Y+TKFF WE GY+ SMDIQHDRAG+Y+C+GCLV
Sbjct:  137 LDPAVVYDRFGHLTAAMLLFALLFCAMLYLKGWYAPSTRDSGSNGSLIMDYFWGMELYPRILGWDVKMFTNCRFGMMLWALLPMCFAYKQYQDLGGQVSNSMAINVVLQLIYVTKFFWWETGYLCSMDIQHDRAGYYICFGCLV 280
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8319.19431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQU0_9PHAE9.090e-8884.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF6_ECTSI8.080e-8684.72Sterol delta-7 reductase n=1 Tax=Ectocarpus silicu... [more]
A0A835YQ61_9STRA2.090e-6671.94Sterol delta-7 reductase n=1 Tax=Tribonema minus T... [more]
A0A7S3JXB1_9STRA5.340e-5959.71Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TQE9_9STRA1.060e-5862.327-dehydrocholesterol reductase n=2 Tax=Monodopsida... [more]
A0A7R9UCM9_9STRA2.000e-5866.18Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4DW51_9EUKA6.460e-5861.59Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2XXP5_9STRA1.940e-5763.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3GQ32_9STRA8.570e-5761.15Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6V1WQP4_HETAK1.240e-5659.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8319contigM-pyrifera_M_contig8319:162..2920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score269.6
Seed ortholog evalue8.3e-70
Seed eggNOG ortholog2880.D8LNF6
Preferred nameDHCR7
KEGG rclassRC00138
KEGG koko:K00213
KEGG ReactionR01451,R01456,R07487,R07492
KEGG Pathwayko00100,ko01100,ko01110,map00100,map01100,map01110
KEGG ModuleM00101
Hectar predicted targeting categorysignal anchor
GOsGO:0000166,GO:0001568,GO:0001944,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005640,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006694,GO:0006695,GO:0007275,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009058,GO:0009791,GO:0009889,GO:0009918,GO:0009987,GO:0010817,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016491,GO:0016627,GO:0016628,GO:0019216,GO:0019218,GO:0019222,GO:0019867,GO:0030154,GO:0030176,GO:0030323,GO:0030324,GO:0031090,GO:0031224,GO:0031227,GO:0031965,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0033489,GO:0033490,GO:0035264,GO:0035295,GO:0036094,GO:0040007,GO:0042127,GO:0042175,GO:0042445,GO:0042446,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046890,GO:0047598,GO:0048037,GO:0048513,GO:0048589,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050810,GO:0055114,GO:0060541,GO:0062012,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0090181,GO:0097159,GO:0098588,GO:0098805,GO:0098827,GO:0106118,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
EggNOG free text desc.sterol delta7 reductase activity
EggNOG OGsKOG1435@1,KOG1435@2759
Ec32 ortholog descriptionSterol delta-7 reductase
Ec32 orthologEc-04_004040.1
EC1.3.1.21
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size432
Cds size432
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8319.19431.1prot_M-pyrifera_M_contig8319.19431.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8319 162..2920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816738.7826984-CDS-M-pyrifera_M_contig8319:161..3221622816738.7826984-CDS-M-pyrifera_M_contig8319:161..322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 162..322 +
1692278149.4842377-CDS-M-pyrifera_M_contig8319:161..3221692278149.4842377-CDS-M-pyrifera_M_contig8319:161..322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 162..322 +
1622816738.7932377-CDS-M-pyrifera_M_contig8319:1469..16171622816738.7932377-CDS-M-pyrifera_M_contig8319:1469..1617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 1470..1617 +
1692278149.5004892-CDS-M-pyrifera_M_contig8319:1469..16171692278149.5004892-CDS-M-pyrifera_M_contig8319:1469..1617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 1470..1617 +
1622816738.8071547-CDS-M-pyrifera_M_contig8319:2797..29201622816738.8071547-CDS-M-pyrifera_M_contig8319:2797..2920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 2798..2920 +
1692278149.5096433-CDS-M-pyrifera_M_contig8319:2797..29201692278149.5096433-CDS-M-pyrifera_M_contig8319:2797..2920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8319 2798..2920 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8319.19431.1

>prot_M-pyrifera_M_contig8319.19431.1 ID=prot_M-pyrifera_M_contig8319.19431.1|Name=mRNA_M-pyrifera_M_contig8319.19431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
RLEAIDVYNKLGEIFSGLSLFSLFFVLALYLKGLYAPSTDDCGTNGTFLQ
DYWWGTELYPRVFGADIKMFTNCRFGMMYWAVGAVIYAYAQQNLEGSLSS
SMAVSVILQLTYITKFFHWEMGYMNSMDIQHDRAGFYLCWGCLV
back to top

mRNA from alignment at M-pyrifera_M_contig8319:162..2920+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8319.19431.1 ID=mRNA_M-pyrifera_M_contig8319.19431.1|Name=mRNA_M-pyrifera_M_contig8319.19431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2759bp|location=Sequence derived from alignment at M-pyrifera_M_contig8319:162..2920+ (Macrocystis pyrifera P11B4 male)
AGGCTGGAGGCGATTGACGTGTACAACAAGCTTGGCGAGATTTTCAGCGG
GCTGTCGCTGTTCTCTCTCTTCTTTGTGCTGGCGTTGTACTTGAAGGGGC
TCTACGCTCCGTCGACAGACGACTGTGGAACCAATGGCACTTTCCTCCAG
GACTACTGGTGGTGCGTTTTCTGTTTTGTTTTGTTTTTCGCGTTTTGGTT
CTGGTTCTGGTTTGGTTTGAGTTTGTTTGGTGTTGCTGGTTTGGTTCGGT
TTGTTTGGAGATTTCTTCGCTTGGCGTTGCTTTGCTTTGCTTTGCTTTGC
TTTGCTTTGCGTTGCTTGGCTTTCTTTTCTTTTCTTTTGCTTTGCTTCGC
TTCGCTTTATTTGACCGTTCTTTGCCCTCGTTAGCCTTTCTTTTGCTTTG
TTTTTGATTATAGTTGAATTCGTTTTTTTTTTTTTTTCGATACCATTCCA
TTCCCTTCCGTTTCATTTCATTTCATTGTATTTCGGCCTACCTGTACACT
CCTATTTTTGCTTTGTTGAGGTTATTCCTGCCGTCGCTGTCCTCCTTATC
ACGGAGCATCGAGCGAGCGTGCGTTCGCTACTGCTGTTGCTGCTGCTGCT
GCTGCTGCTGCTGCTCATGCTCATGCTCATACCGCCGTCACCGCCGTCCC
TTCCGCTACCATGGTGTGGCTTCGGACGCGCTCACCCACCTACGCGATTA
AACCACAACAGACACTACAATCCGTAGCTGTGGTCGGGCGAGGGGCGGGG
GTGCCTTGCCGGCATTACTTGTTGTCCCGCGCGTTTTTTTTTTTGTGTGT
GTGTATGGAGGTTGCGCTGCTATTACTAGTGATTTTTGTTTGGCGTGTGC
GCGCTCGGGGCGCATCATGTTGCGCGTGTTGCATCCACCATGCGCGATAC
CAGTATATGTCAGTGCTGCTGTGCTGGAGTATATTCTTGCTCTATCCTTA
TAACTCGCCGTCTCATTTTCTCCCTCTATCTCCCCCGTCCACTCTCTCTT
TCTCTCCATCTACCCTCCCACCCCCTCTTCCTCTTCCTCCCCCCCCACCC
CCCGCCGACGCGCTCTTTATTTATATTTGTCCTCGTCTTCCCGGTTTCCC
CCCCCCCGCGTCGTCTGCTTCCTTTCTCTCTCTCTTCCCTTATCTCTCCT
TCCTGCCCCCCCCCCCCTCCCCTCCCCTCCCCTCCCTATCTATACCCCCT
CCCACCTCCCTCTCTATGTTTGTCGCGCTTCTGTTTTCACCTCCCCCCCC
CCTCTTGCGAAATCGCTTCGATGGCTGGACCTGACCTGATTGACCTGGCG
GTTTTCAGGGGCACCGAGCTCTACCCGCGCGTGTTCGGTGCGGACATTAA
GATGTTCACCAACTGCAGGTTCGGGATGATGTACTGGGCCGTCGGCGCCG
TAATCTACGCCTACGCTCAGCAGAACTTGGAGGGAAGCCTGTCCAGCAGC
ATGGCGGTGAGCAAGAGAAGGCTTGTTTGAGGGGGGGGGGGAGGGGGGTG
TACTCGATAGGAGGGATGTACTCGATCTCATGCATGGCCGTGGGGGGGCT
GTTTCCGTTGGGGGCGTGTTTGCTATTTTGGCCTTGTTTTTGGTTACTTG
GTTTGGTGCCGGGCACTGCTGTGCACCTGGTGCCTTATTTTAGCGTTTTT
TTGCCGGGACTAGTAGTATGTCGTGATTTTTTTTGCCATTGCATGTTTGT
GGATTGCCCGGGCAAGCGCTTTGTTTTTCAACACGTTAGCCACAGCCAAA
ATCTTCCTATACTTGTTCTAAGTAGTGTTTCCCGACAAAGAGTGGGCGTT
TTCCCGAAGGGGTTCACTGTATATTTGCTATGTACTTGCCCCTGGTACTC
GCAGTTGTTGTTACGATGACCACCGTACTGTTGGTGTGTAGGAAATCTGT
TCGGGTGGCCATCCCATTTTTCTCTCTTTCACTGCTGTGTCTGGGTCCGT
GGGCGCGTGCATCTGTGTTGTGTCTGTCGTATCCGGTACGATGGCATTGG
TATTGCATCGCCTGCTCATCCTTGCTGCATTACGATGGCATGACATTGCA
TGCTCCACCCTCCTTACTGCATTTACAAAGTGCAATGTACAGCAGTAGTG
TAATCTGAGTCGTCGTTTTGTTGCCACTGGGGTTGTACTTATCTATACAG
GCTGAAGAATCAGTACGGACACTGGTTGTCGACGGGTAGGAAGGACTTTA
ATGTGAATACTTCGAAGTACGTAACATGAGCGCTGTCTTGTTTGTCCATC
TCGTCACCGCACCATCGTATATGCTGGGATGGCAGAAGAAATACGTTTCC
CCCGTCTCGACGCCGTTTTTGTCGAAGAGTGTATGCTACAAGTTTACAGA
TAGTCCTGATTTTATTTTACCCGATTTTTGCTTTTTTGGTTGCTGATTTT
CCTTCTTTTTTTTCCTGACAAGGGAAATGTTAAATACGAAGTTTTTTTTT
CCTATTTTTATTTTATTTTCGACCTCTCTCTGCACAAAAAGCCCTGACGT
AAGAAGTATTTCCTGTTTTTTCGTGTTTCTCCTGACTTTAGTTTCCAAAG
AAAAATAGTAATTCAGGAAAAAAAAAAGAAGTATGCTCGATATTGACGGG
CTGTACTTTGACGCGCATATACACACGCGTACACAGGTGAGCGTGATCCT
CCAGCTGACGTACATCACCAAATTTTTCCACTGGGAGATGGGCTACATGA
ACAGCATGGACATTCAGCACGACCGCGCCGGCTTCTACCTCTGCTGGGGG
TGTCTGGTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8319:162..2920+

>mRNA_M-pyrifera_M_contig8319.19431.1 ID=mRNA_M-pyrifera_M_contig8319.19431.1|Name=mRNA_M-pyrifera_M_contig8319.19431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig8319:162..2920+ (Macrocystis pyrifera P11B4 male)
AGGCTGGAGGCGATTGACGTGTACAACAAGCTTGGCGAGATTTTCAGCGG
GCTGTCGCTGTTCTCTCTCTTCTTTGTGCTGGCGTTGTACTTGAAGGGGC
TCTACGCTCCGTCGACAGACGACTGTGGAACCAATGGCACTTTCCTCCAG
GACTACTGGTGAGGCTGGAGGCGATTGACGTGTACAACAAGCTTGGCGAG
ATTTTCAGCGGGCTGTCGCTGTTCTCTCTCTTCTTTGTGCTGGCGTTGTA
CTTGAAGGGGCTCTACGCTCCGTCGACAGACGACTGTGGAACCAATGGCA
CTTTCCTCCAGGACTACTGGTGGGGCACCGAGCTCTACCCGCGCGTGTTC
GGTGCGGACATTAAGATGTTCACCAACTGCAGGTTCGGGATGATGTACTG
GGCCGTCGGCGCCGTAATCTACGCCTACGCTCAGCAGAACTTGGAGGGAA
GCCTGTCCAGCAGCATGGCGGGGCACCGAGCTCTACCCGCGCGTGTTCGG
TGCGGACATTAAGATGTTCACCAACTGCAGGTTCGGGATGATGTACTGGG
CCGTCGGCGCCGTAATCTACGCCTACGCTCAGCAGAACTTGGAGGGAAGC
CTGTCCAGCAGCATGGCGGTGAGCGTGATCCTCCAGCTGACGTACATCAC
CAAATTTTTCCACTGGGAGATGGGCTACATGAACAGCATGGACATTCAGC
ACGACCGCGCCGGCTTCTACCTCTGCTGGGGGTGTCTGGTGGTGAGCGTG
ATCCTCCAGCTGACGTACATCACCAAATTTTTCCACTGGGAGATGGGCTA
CATGAACAGCATGGACATTCAGCACGACCGCGCCGGCTTCTACCTCTGCT
GGGGGTGTCTGGTG
back to top