mRNA_M-pyrifera_M_contig83187.19430.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83187.19430.1
Unique NamemRNA_M-pyrifera_M_contig83187.19430.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A7S1TWD5_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWD5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.570e-11
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 1 
Query:   25 FLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETA----VETIRSSTDRLRATCISVRNGGSPDDLSRMLQGVVDAAVTGGIANYEPILNGLYRRVHPEI 327
            FL LW  R       +FPS  RR  ++  +  +L PLE A    VE  R   +++RA    + +G      +  LQGVVDAAV GG+ANYE    G Y+  +PEI
Sbjct:  441 FLDLWVERFHIQVEDSFPSIHRRLEIVERQSTVLNPLEVALRGVVEKNRELLEKIRA-LEKIPDGQGDQPTTMALQGVVDAAVNGGLANYEVFFTGAYQETNPEI 544
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: UPI0006C97678 (dedicator of cytokinesis protein 1 isoform X1 n=2 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C97678)

HSP 1 Score: 67.0 bits (162), Expect = 1.230e-10
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 1 
Query:   25 FLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSP--DDLSRMLQGVVDAAVTGGIANYEP-ILNGLYRRVHPE 324
            F  LW  R+   T H+ P   R   V++ E  L++PLE A+ET+ ++   LR   +S R+  S   + L+  L G++DAAV GGI NYE   LN  Y+  HPE
Sbjct: 1505 FASLWLERTLLATSHSLPGILRWFLVVSSETYLVSPLENAIETMEATKAALRDLIVSHRSDSSLPLNPLTMKLNGILDAAVMGGIDNYEKAFLNVEYKESHPE 1607
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A1B6G9H3_9HEMI (DOCKER domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6G9H3_9HEMI)

HSP 1 Score: 64.3 bits (155), Expect = 9.690e-10
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1 
Query:   13 ETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSP--DDLSRMLQGVVDAAVTGGIANYEPILNGL-YRRVHPE 324
            E + F  LW  R+  VT +  P   R  PV A +   ++PL  A+ET+ ++   LR   ++ R+  +   + LS  L G+VDAAV GGI NYE    G  Y R HPE
Sbjct:  307 EDNEFASLWIERTVLVTSYPLPGILRWFPVTAADTFQISPLRNAIETMEATNKELRQLIVAHRHDPTLPINPLSLKLNGIVDAAVMGGINNYEKAFFGEDYLRRHPE 413
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A7R9LVM6_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LVM6_9ACAR)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-9
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:   25 FLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSP--DDLSRMLQGVVDAAVTGGIANYEP-ILNGLYRRVHP 321
            F  +W  R+T +T +  P   RR PV       L PLE A+ET+ +S  +++   I  R+  +   + LS  L G+VDAAV GGI NYE    N  Y   HP
Sbjct: 1500 FADMWIERTTLLTSYALPGILRRFPVTQTNTFELNPLENAIETMENSNKKVKNLIIQYRSDSALPINPLSLALNGIVDAAVMGGIVNYEKAFFNDDYLAKHP 1601
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A8K0K595_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K595_LADFU)

HSP 1 Score: 63.9 bits (154), Expect = 1.490e-9
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 1 
Query:   13 ETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSP--DDLSRMLQGVVDAAVTGGIANYEP-ILNGLYRRVHPE 324
            E + F  LW  R+  VT +  P   R  PV + +   ++PL+ A+ET+ ++   LR    S+RN  S   + LS  L G+VD AV GG+ANYE       Y   HP+
Sbjct: 1516 EENEFASLWLARTVLVTSYPLPGILRWFPVTSADTFEISPLQNAIETMETTAKELRDMITSLRNDPSLPLNHLSMKLNGIVDPAVMGGVANYEKAFFTSEYAAEHPD 1622
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A1B6MF00_9HEMI (DOCKER domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MF00_9HEMI)

HSP 1 Score: 63.5 bits (153), Expect = 1.520e-9
Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 1 
Query:   13 ETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGG--SPDDLSRMLQGVVDAAVTGGIANYEPILNGL-YRRVHPE 324
            E + F  LW  R+  VT +  P   R  PV A +   ++PL  A+ET+ ++   LR   ++ R+      + LS  L G+VDAAV GGI NYE    G  Y R HPE
Sbjct:  154 EDNEFASLWIERTVLVTSYPLPGILRWFPVTATDTFQISPLRNAIETMETTNKELRQLIVAHRHDPVLPINPLSLKLNGIVDAAVMGGINNYEKAFFGEDYLRRHPE 260
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: UPI000719CABD (dedicator of cytokinesis protein 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CABD)

HSP 1 Score: 63.5 bits (153), Expect = 2.020e-9
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1 
Query:   13 ETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGS--PDDLSRMLQGVVDAAVTGGIANYEP-ILNGLYRRVHPE 324
            E + F  LWT ++  VT + +P   +  PV+  E   +TPLE A+ET+ ++  +LR      +   +   + +S ML G+VDAAV GGI NYE       Y   HP+
Sbjct: 1453 EKNEFANLWTEKTVLVTAYPYPGILQWFPVVETERHEVTPLENAIETMENTNTKLRQMVKQHQQDMTLPVNPISMMLNGIVDAAVMGGIRNYEDAFFTAEYLEKHPD 1559
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A6A4V1W7_AMPAM (Dedicator of cytokinesis protein 3 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V1W7_AMPAM)

HSP 1 Score: 63.5 bits (153), Expect = 2.020e-9
Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 1 
Query:   25 FLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSPDD---LSRMLQGVVDAAVTGGIANY-EPILNGLYRRVHPEI 327
            F  LW  R+T  T    P   R  PV +    +++P++ A ET++++  +LR         G+PD+   LS  LQG++DAAV GGIAN+ E    G +   HPE+
Sbjct: 1436 FKTLWLERTTLQTEAPLPGILRWFPVTSSRREMVSPIQHACETVQTANRQLRQLIAQHSAPGAPDNVSPLSMRLQGMIDAAVNGGIANFQEAFFTGDFASQHPEL 1540
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A1B6JPF2_9HEMI (DOCKER domain-containing protein (Fragment) n=2 Tax=Homalodisca TaxID=139475 RepID=A0A1B6JPF2_9HEMI)

HSP 1 Score: 63.2 bits (152), Expect = 2.700e-9
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1 
Query:   13 ETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRLRATCISVRNGGSP--DDLSRMLQGVVDAAVTGGIANYEPILNGL-YRRVHPE 324
            E + F  LW  R+  VT +  P   R  PV A +   ++PL  A+ET+ ++   LR   ++ R+  +   + LS  L G+VDAAV GGI NYE    G  Y R HPE
Sbjct:  645 EDNEFGSLWIERTVLVTSYPLPGILRWFPVTAADTFQISPLRNAIETMEATNKELRQLIVAHRHDPTLPINPLSLKLNGIVDAAVMGGINNYEKAFFGEDYLRRHPE 751
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BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Match: A0A3B4BMB5_9GOBI (Dedicator of cytokinesis 5 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BMB5_9GOBI)

HSP 1 Score: 62.8 bits (151), Expect = 3.760e-9
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 1 
Query:   25 FLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVETIRSSTDRL-----RATCISVRNGGSPDDLSRMLQGVVDAAVTGGIANYEP-ILNGLYRRVHPE 324
            F  +W  R+T++T + FP   +   V +V    L+PLE A+ET+ S+ ++L     +  C +     S + LS ML G+VDAAV GG+ANYE       Y + HPE
Sbjct: 1449 FATMWIERTTYITAYHFPGILKWFEVKSVSVEELSPLENAIETMESTNEKLSNLVQKQACDASL---SINPLSMMLNGIVDAAVMGGLANYEKAFFTDTYIQQHPE 1551
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83187.19430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1TWD5_9STRA4.570e-1139.05Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
UPI0006C976781.230e-1039.81dedicator of cytokinesis protein 1 isoform X1 n=2 ... [more]
A0A1B6G9H3_9HEMI9.690e-1038.32DOCKER domain-containing protein (Fragment) n=1 Ta... [more]
A0A7R9LVM6_9ACAR1.090e-938.24Hypothetical protein n=1 Tax=Oppiella nova TaxID=3... [more]
A0A8K0K595_LADFU1.490e-936.45Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1B6MF00_9HEMI1.520e-938.32DOCKER domain-containing protein (Fragment) n=1 Ta... [more]
UPI000719CABD2.020e-935.51dedicator of cytokinesis protein 1-like n=1 Tax=Pr... [more]
A0A6A4V1W7_AMPAM2.020e-936.19Dedicator of cytokinesis protein 3 n=3 Tax=Amphiba... [more]
A0A1B6JPF2_9HEMI2.700e-938.32DOCKER domain-containing protein (Fragment) n=2 Ta... [more]
A0A3B4BMB5_9GOBI3.760e-937.74Dedicator of cytokinesis 5 n=1 Tax=Periophthalmus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83187contigM-pyrifera_M_contig83187:15..344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score70.1
Seed ortholog evalue7.4e-10
Seed eggNOG ortholog132113.XP_003492822.1
Preferred namembc
KEGG koko:K05727,ko:K13708
KEGG Pathwayko04510,ko04810,ko05100,ko05131,map04510,map04810,map05100,map05131
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000768,GO:0000902,GO:0001655,GO:0001667,GO:0001700,GO:0001726,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002164,GO:0003006,GO:0003674,GO:0005085,GO:0005088,GO:0005089,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006928,GO:0006949,GO:0006996,GO:0007010,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007391,GO:0007399,GO:0007417,GO:0007517,GO:0007520,GO:0007522,GO:0007523,GO:0008150,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009987,GO:0010631,GO:0014902,GO:0016020,GO:0016043,GO:0016203,GO:0016331,GO:0016477,GO:0017016,GO:0017048,GO:0019897,GO:0019898,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0030029,GO:0030036,GO:0030154,GO:0030676,GO:0030707,GO:0030855,GO:0031252,GO:0031267,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0035212,GO:0035295,GO:0040008,GO:0040011,GO:0042692,GO:0042995,GO:0043085,GO:0043087,GO:0043547,GO:0044093,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044703,GO:0048365,GO:0048468,GO:0048477,GO:0048513,GO:0048569,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0051020,GO:0051146,GO:0051179,GO:0051336,GO:0051345,GO:0051674,GO:0051704,GO:0060429,GO:0060538,GO:0061061,GO:0061326,GO:0061327,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0072001,GO:0072002,GO:0090130,GO:0090132,GO:0090630,GO:0098772,GO:0120025
EggNOG free text desc.DOCK N-terminus
EggNOG OGs38BY5@33154,3B9R9@33208,3CSAM@33213,3SJB9@50557,41Y4N@6656,46JYP@7399,KOG1997@1,KOG1998@2759
COG Functional cat.T
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons1
Model size330
Cds size330
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816738.7488627-CDS-M-pyrifera_M_contig83187:14..3441622816738.7488627-CDS-M-pyrifera_M_contig83187:14..344Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83187 15..344 -
1692278149.468246-CDS-M-pyrifera_M_contig83187:14..3441692278149.468246-CDS-M-pyrifera_M_contig83187:14..344Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83187 15..344 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83187.19430.1prot_M-pyrifera_M_contig83187.19430.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83187 15..344 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83187.19430.1

>prot_M-pyrifera_M_contig83187.19430.1 ID=prot_M-pyrifera_M_contig83187.19430.1|Name=mRNA_M-pyrifera_M_contig83187.19430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
EPPPETSPFLRLWTRRSTFVTRHTFPSARRRSPVIAVEEVLLTPLETAVE
TIRSSTDRLRATCISVRNGGSPDDLSRMLQGVVDAAVTGGIANYEPILNG
LYRRVHPEIR
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mRNA from alignment at M-pyrifera_M_contig83187:15..344-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83187.19430.1 ID=mRNA_M-pyrifera_M_contig83187.19430.1|Name=mRNA_M-pyrifera_M_contig83187.19430.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig83187:15..344- (Macrocystis pyrifera P11B4 male)
GAGCCACCACCTGAAACATCTCCATTCCTGCGACTCTGGACACGACGTTC
TACTTTTGTGACACGACATACCTTTCCAAGTGCACGAAGGCGTTCACCAG
TCATAGCTGTGGAAGAAGTCTTGCTCACACCATTGGAGACTGCAGTTGAA
ACCATTCGATCCTCAACAGACCGTCTTCGTGCAACATGTATATCTGTACG
GAATGGAGGCTCACCTGATGACCTTTCTCGTATGTTGCAAGGTGTTGTAG
ATGCAGCTGTGACTGGGGGGATTGCAAATTATGAGCCAATTTTGAATGGT
CTGTATCGTCGTGTTCACCCTGAAATTCGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83187:15..344-

>mRNA_M-pyrifera_M_contig83187.19430.1 ID=mRNA_M-pyrifera_M_contig83187.19430.1|Name=mRNA_M-pyrifera_M_contig83187.19430.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig83187:15..344- (Macrocystis pyrifera P11B4 male)
GAGCCACCACCTGAAACATCTCCATTCCTGCGACTCTGGACACGACGTTC
TACTTTTGTGACACGACATACCTTTCCAAGTGCACGAAGGCGTTCACCAG
TCATAGCTGTGGAAGAAGTCTTGCTCACACCATTGGAGACTGCAGTTGAA
ACCATTCGATCCTCAACAGACCGTCTTCGTGCAACATGTATATCTGTACG
GAATGGAGGCTCACCTGATGACCTTTCTCGTATGTTGCAAGGTGTTGTAG
ATGCAGCTGTGACTGGGGGGATTGCAAATTATGAGCCAATTTTGAATGGT
CTGTATCGTCGTGTTCACCCTGAAATTCGAGAGCCACCACCTGAAACATC
TCCATTCCTGCGACTCTGGACACGACGTTCTACTTTTGTGACACGACATA
CCTTTCCAAGTGCACGAAGGCGTTCACCAGTCATAGCTGTGGAAGAAGTC
TTGCTCACACCATTGGAGACTGCAGTTGAAACCATTCGATCCTCAACAGA
CCGTCTTCGTGCAACATGTATATCTGTACGGAATGGAGGCTCACCTGATG
ACCTTTCTCGTATGTTGCAAGGTGTTGTAGATGCAGCTGTGACTGGGGGG
ATTGCAAATTATGAGCCAATTTTGAATGGTCTGTATCGTCGTGTTCACCC
TGAAATTCGA
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