mRNA_M-pyrifera_M_contig10929.1941.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: D8LDG7_ECTSI (Putative ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG7_ECTSI) HSP 1 Score: 342 bits (877), Expect = 2.480e-109 Identity = 168/198 (84.85%), Postives = 182/198 (91.92%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
IFRSWFGFKNIGK+TS ESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLA DGLPPKREVVVYAGM+S QR +Y+LAG+NALR+AL+DM IEGAARLSEININMNQRKVCQHPFLFGEPKDK+TG++ G NPE+LV ASGK+A+MDRMLKKL GGHKVLIFSQMT LLDVLEDYL HRG F RIDGSTDV+DRQ
Sbjct: 438 IFRSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLAGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQ 635
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A6H5KPB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB1_9PHAE) HSP 1 Score: 339 bits (869), Expect = 4.510e-108 Identity = 166/198 (83.84%), Postives = 181/198 (91.41%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
IFRSWFGFKNIGK+TS ESIVDEQQHSKIVSKLHEILRPFLIRR+KKDVLA DGLPPKREVVVYAGM+S QR +Y+L G+NALR+AL+DM IEGAARLSEININMNQRKVCQHPFLFGEPKDK+TG++ G NPE+LV ASGK+A+MDRMLKKL GGHKVLIFSQMT LLDVLEDYL HRG F RIDGSTDV+DRQ
Sbjct: 490 IFRSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRIKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQ 687
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A835Z5K9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K9_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.750e-80 Identity = 122/198 (61.62%), Postives = 164/198 (82.83%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+FRSWFGF+NIGKD S + IV +++ + +VS+LHEILRPFL+RR+K+DVL Q+ +PPKREV+VYAGM+ LQR++Y L LR+ L ++ IEGAA +S+IN NMNQRKVCQHP+LFGEP+DK TG++ G +NPE LV ASGKLA++DR+LK+L++ GHKVL+FSQMT +L +LEDYL HR + RIDG++ ++DRQ
Sbjct: 212 VFRSWFGFRNIGKDISVDQIVSDEEQANVVSQLHEILRPFLLRRLKRDVL-QNEMPPKREVLVYAGMTRLQRTYYSLVEAGTLRDTLCELGIEGAADISQINSNMNQRKVCQHPYLFGEPRDK-TGEYVGVSNPETLVAASGKLALLDRLLKRLKQQGHKVLLFSQMTSMLTILEDYLRHRDWGYCRIDGTSALIDRQ 407
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A835ZBT7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT7_9STRA) HSP 1 Score: 251 bits (641), Expect = 4.370e-76 Identity = 120/198 (60.61%), Postives = 158/198 (79.80%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+FRSWF F IGKD + + I+ E+Q +K+V++LHEILRPFL+RR+K+DVL Q +PPK E+VVYAGM+ LQR++Y L LRE L+++ IEGAA +S+INI+MN RKVCQHP+LFGEP+DK +G++ G TNPE LV ASGKLA++DR+L KLRK GHKVL+FSQMT +L +LEDY+ HR + RIDGS+ + RQ
Sbjct: 315 VFRSWFRFGTIGKDVTVDKIISEEQQAKVVTRLHEILRPFLLRRLKRDVL-QVEIPPKCEIVVYAGMTRLQRTYYSLVETGTLRETLLELGIEGAAEISQINISMNLRKVCQHPYLFGEPRDK-SGEYVGTTNPETLVAASGKLALLDRLLTKLRKQGHKVLVFSQMTSMLSILEDYVRHRRWGYCRIDGSSPLAGRQ 510
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A6U1QEQ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEQ7_9STRA) HSP 1 Score: 238 bits (608), Expect = 8.470e-71 Identity = 116/198 (58.59%), Postives = 149/198 (75.25%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+F+SWFGF+NIGKDT I+DE+ ++IV+KLHEILRPFL+RR+K++VL +PPK+E+VVYA MS LQR FY L K +LR+ L IEGA +S+IN MN RKVC HPFLFGEPK G + GE NPE LV A GK+ ++D++ KKL+ GGHKVL+FSQMT +L ++EDYL +RG + RIDGS +V DRQ
Sbjct: 412 VFQSWFGFRNIGKDTQVSDIIDEEHKNRIVTKLHEILRPFLLRRLKQNVLVD--MPPKKELVVYAPMSQLQRDFYALVQKGSLRDVLTTWGIEGAKGISQINDCMNLRKVCNHPFLFGEPKTN-EGVYLGEANPETLVSACGKMVLLDKLCKKLKAGGHKVLLFSQMTGVLSIIEDYLRNRGWRYCRIDGSVNVFDRQ 606
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A7S0UK64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UK64_9STRA) HSP 1 Score: 222 bits (566), Expect = 9.590e-69 Identity = 116/202 (57.43%), Postives = 148/202 (73.27%), Query Frame = 1
Query: 1 IFRSWFGFKNIG----KDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+F+SWFGFK+IG K TSEE I+ EQ+ +K V+KLHEILRPFL+RR+K DVL + +PPK+EVVVY+GMS LQ + +L K LR+ L+ I A LS+ N MNQRK HPF+FGEP D TG G P+LLV ASGK A+MDRML++L K GH+VLIFSQMTK+L+++EDYL+ R + RIDGST++ DRQ
Sbjct: 112 VFQSWFGFKDIGQKSHKGTSEEDIMLEQRKNKTVTKLHEILRPFLLRRVKVDVLKE--MPPKKEVVVYSGMSKLQLGYADLIEKGVLRDELLRQGIADARNLSQTNKMMNQRKNVNHPFMFGEPLDPSTGTHIGTIYPQLLVRASGKFALMDRMLERLHKDGHQVLIFSQMTKVLNIIEDYLNFRHWKYCRIDGSTNIDDRQ 311
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A7S3M2I2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2I2_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.030e-67 Identity = 112/193 (58.03%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGET-NPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGST 576
+F+SWF FKNIGKDT E I+ ++ +IV+K+HEILRPF++RR+K + L D LPPKREVVVY GMSSLQR +Y LRE+LV++ +EGA ++S+IN+ MNQRKVC HPFLFG+ D TG+ E N +LV ASGK ++ RML +L+K G KVLIFSQMT L+D+LEDYLH +G A+ R DGST
Sbjct: 295 VFQSWFDFKNIGKDTKVEDILSTEEQDRIVTKMHEILRPFVLRRIKTETLG-DKLPPKREVVVYCGMSSLQREYYARVLSGTLRESLVEVGVEGAKKISQINMLMNQRKVCNHPFLFGDLLDASTGESLREAGNGRVLVGASGKFKLLHRMLPRLKKEGSKVLIFSQMTSLMDILEDYLHLQGHAYVRFDGST 486
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A7S3LA22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LA22_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.490e-67 Identity = 111/202 (54.95%), Postives = 147/202 (72.77%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKDT----SEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+F+SWFGFK+IG+ T +EE+I+ EQ+ ++ V+KLHEILRPFL+RR+K DVL++ +PPK+EV+VY+G+S LQ + L K LRE L+ IE LS+ N MN RK HPFLFGEP D TG G +P+LLV ASGK A++DRML +L K GH+VLIFSQMTK+L V+EDYL+ R + RIDGST++ +RQ
Sbjct: 90 VFQSWFGFKDIGQKTQGATNEEAILLEQRQNQTVTKLHEILRPFLLRRIKTDVLSE--MPPKKEVIVYSGVSKLQAGYAALIDKGTLRETLLSQGIEDGRTLSQTNQMMNHRKNINHPFLFGEPLDPATGVHLGTAHPQLLVRASGKFALLDRMLDRLHKDGHQVLIFSQMTKVLSVMEDYLNFRKWKYCRIDGSTNIDERQ 289
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: A0A7S2G339_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G339_9STRA) HSP 1 Score: 228 bits (581), Expect = 5.400e-67 Identity = 116/199 (58.29%), Postives = 147/199 (73.87%), Query Frame = 1
Query: 1 IFRSWFGFKNIGKD-TSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
+F+SWFGFKNIGKD T EE IV +Q IV+KLHEILRPFL+RR+KKDVL +PPK E+V+Y MS LQR +Y+L K LRE+L++M + G S+IN NMN RK+C HPFLFGEP D +G+ + +PELLV SGK +MDRMLKKL+ GH+VLIFSQMT+LL++LEDY ++ G RIDGS + +RQ
Sbjct: 389 VFQSWFGFKNIGKDGTQEEDIVAKQVQDNIVTKLHEILRPFLLRRLKKDVLLD--MPPKLEIVLYTPMSVLQRDYYDLTLKGELRESLLNMGLSGGRECSQINQNMNLRKICNHPFLFGEPSDD-SGQPMCDAHPELLVSVSGKFKIMDRMLKKLKSNGHQVLIFSQMTELLNILEDYTNNMGWRTCRIDGSIKIQERQ 584
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Match: B8CCT4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCT4_THAPS) HSP 1 Score: 217 bits (552), Expect = 5.050e-65 Identity = 112/203 (55.17%), Postives = 145/203 (71.43%), Query Frame = 1
Query: 1 IFRSWFGFKNIGK-----DTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLAQDGLPPKREVVVYAGMSSLQRSFYELAGKNALREALVDMDIEGAARLSEININMNQRKVCQHPFLFGEPKDKITGKFAGETNPELLVMASGKLAVMDRMLKKLRKGGHKVLIFSQMTKLLDVLEDYLHHRGRAFGRIDGSTDVMDRQ 594
IF+SWFGFKNIG+ T EE IV EQ+ ++ VSKLH+ILRPFL+RR+K DVL +PPK+EVVVYAGMS LQ + ++ + LR+ L++ IE A LS+ N MN RK C HPF+FGEP D +G G +P+LL+ ASGK A++DRML++L K H+VLIFSQMT LL+V+EDYL R + RIDGST + +RQ
Sbjct: 196 IFQSWFGFKNIGQKGVQGSTREEDIVAEQRQNQTVSKLHDILRPFLLRRIKMDVLTD--MPPKKEVVVYAGMSKLQAGYAQMIEQGVLRDMLLNQGIEQARTLSQTNKQMNHRKNCNHPFMFGEPIDPASGAHMGSAHPQLLIRASGKFALLDRMLERLFKDKHQVLIFSQMTSLLNVIEDYLLFRQWKYCRIDGSTKIDERQ 396 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10929.1941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10929.1941.1 >prot_M-pyrifera_M_contig10929.1941.1 ID=prot_M-pyrifera_M_contig10929.1941.1|Name=mRNA_M-pyrifera_M_contig10929.1941.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp IFRSWFGFKNIGKDTSEESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLback to top mRNA from alignment at M-pyrifera_M_contig10929:6235..9955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10929.1941.1 ID=mRNA_M-pyrifera_M_contig10929.1941.1|Name=mRNA_M-pyrifera_M_contig10929.1941.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3721bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:6235..9955+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10929:6235..9955+ >mRNA_M-pyrifera_M_contig10929.1941.1 ID=mRNA_M-pyrifera_M_contig10929.1941.1|Name=mRNA_M-pyrifera_M_contig10929.1941.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:6235..9955+ (Macrocystis pyrifera P11B4 male)back to top |