prot_M-pyrifera_M_contig83070.19403.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig83070.19403.1
Unique Nameprot_M-pyrifera_M_contig83070.19403.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length237
Homology
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI0005297078 (ubiquitin conjugation factor E4 B n=1 Tax=Chlamydotis macqueenii TaxID=187382 RepID=UPI0005297078)

HSP 1 Score: 200 bits (509), Expect = 1.320e-58
Identity = 101/226 (44.69%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LN+ L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F      V++   +   A+I   DAPDE+ DP+M  +M DPVRLPSG I+DRS+I RHLL+  TDPF R  LT   LEP+ ELKE+IQ W+  K
Sbjct:  208 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDK 433          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI0009A3423E (ubiquitin conjugation factor E4 B-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3423E)

HSP 1 Score: 198 bits (504), Expect = 1.040e-57
Identity = 101/226 (44.69%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LN+ L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+HL+C  F  A A+D RSY+   +   I  + + G++S   ++ F      V++   +   A+I   DAPDE+ DP+M  +M DPV+LPSG I+DRS+I RHLL+ PTDPF R  LT   LEP+ ELKE+I  W+  K
Sbjct:  220 RQSQLTQDERVSRSYLALGAETVDMFHYLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLHLDCPRFAKAIADDQRSYSKELFDEVISKMRKAGIKSTIAIEKFRLLAEKVEEIVTKNARAEIDYGDAPDEFRDPLMDTLMNDPVKLPSGTIMDRSIILRHLLNSPTDPFNRQHLTENMLEPVPELKEKIHAWMKEK 445          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: UPI001B35150A (ubiquitin conjugation factor E4 B isoform X4 n=1 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B35150A)

HSP 1 Score: 206 bits (525), Expect = 1.340e-57
Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LN+ L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F      V++   +   A+I   DAPDE+ DP+M  +M DPVRLPSG I+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE+IQ W+  K
Sbjct:  821 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKEQIQAWMREK 1046          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A5F9CDE9_RABIT (Ubiquitination factor E4B n=2 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CDE9_RABIT)

HSP 1 Score: 206 bits (525), Expect = 1.680e-57
Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LN+ L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F      V++   +   A+I   DAPDE+ DP+M  +M DPVRLPSG I+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE+IQ W+  K
Sbjct:  943 RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKEQIQAWMREK 1168          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A3N0YLA0_ANAGA (Ubiquitin conjugation factor E4 B n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YLA0_ANAGA)

HSP 1 Score: 205 bits (521), Expect = 4.760e-57
Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LNY L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F   +  V++       +++   DAPDE+ DP+M  +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE IQ W+  K
Sbjct:  825 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREK 1050          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A8C5PHJ0_9ANUR (Ubiquitination factor E4B n=3 Tax=Anura TaxID=8342 RepID=A0A8C5PHJ0_9ANUR)

HSP 1 Score: 204 bits (520), Expect = 7.920e-57
Identity = 103/226 (45.58%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            K+ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LN+ L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+HL+C  F  A A+D RSY+   +   I  + + G++S   ++ F      V++       A+I   DAPDE+ DP+M  +M +PVRLPSGNI+DRS+I RHLL+  TDPF R  LT   LEP+ ELKE IQ W+ +K
Sbjct:  942 KQSQLAQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLHLDCPRFAKAIADDQRSYSKDLFEEVISKMRKAGIKSTIAVEKFKLLAEKVEETVARNARAEIDYSDAPDEFRDPLMDTLMSEPVRLPSGNIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKERIQAWMQNK 1167          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A6P6M8Q6_CARAU (ubiquitin conjugation factor E4 B-like isoform X2 n=9 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6M8Q6_CARAU)

HSP 1 Score: 204 bits (520), Expect = 8.460e-57
Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LNY L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F   +  V++       +++   DAPDE+ DP+M  +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE IQ W+  K
Sbjct: 1076 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYGDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMRGK 1301          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A6P6M9U0_CARAU (ubiquitin conjugation factor E4 B-like isoform X1 n=2 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6M9U0_CARAU)

HSP 1 Score: 204 bits (520), Expect = 8.520e-57
Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LNY L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F   +  V++       +++   DAPDE+ DP+M  +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE IQ W+  K
Sbjct: 1112 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYGDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMRGK 1337          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: A0A673I932_9TELE (Ubiquitin conjugation factor E4 B-like n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A673I932_9TELE)

HSP 1 Score: 202 bits (513), Expect = 9.180e-57
Identity = 100/226 (44.25%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LNY L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C+ F  A A+D RSY+   +   I  + + G++S   ++ F   +  V++       +++  +DAPDE+ DP+M  +M DPV+LPSGNI+DR++I RHLL+ PTDPF R PLT   LEP+ ELK  IQ W+  K
Sbjct:  530 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYNDAPDEFKDPLMDTLMTDPVQLPSGNIMDRAIILRHLLNSPTDPFNRQPLTESMLEPVPELKARIQAWMREK 755          
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Match: Q8JIX0_DANRE (Ubiquitination factor E4/UFD2 n=19 Tax=Otophysi TaxID=186626 RepID=Q8JIX0_DANRE)

HSP 1 Score: 204 bits (519), Expect = 1.090e-56
Identity = 102/226 (45.13%), Postives = 142/226 (62.83%), Query Frame = 0
Query:    7 KEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVERIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCSTFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRSEEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSDPTDPFTRGPLTLQDLEPMQELKEEIQGWLLSK 232
            ++ +  Q ER  +SY+ L    V +FH +  +V    +RPEL  R+A  LNY L  L GPKCR+LKVEN +KY FEPK LL ++ DIY+ L+C  F  A A+D RSY+   +   I  + + G++S   ++ F   +  V++       +++   DAPDE+ DP+M  +M DPV+LPSGNI+DRS+I RHLL+ PTDPF R PLT   LEP+ ELKE IQ W+  K
Sbjct:  953 RQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREK 1178          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83070.19403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00052970781.320e-5844.69ubiquitin conjugation factor E4 B n=1 Tax=Chlamydo... [more]
UPI0009A3423E1.040e-5744.69ubiquitin conjugation factor E4 B-like n=1 Tax=Rhi... [more]
UPI001B35150A1.340e-5745.58ubiquitin conjugation factor E4 B isoform X4 n=1 T... [more]
A0A5F9CDE9_RABIT1.680e-5745.58Ubiquitination factor E4B n=2 Tax=Oryctolagus cuni... [more]
A0A3N0YLA0_ANAGA4.760e-5745.13Ubiquitin conjugation factor E4 B n=1 Tax=Anabaril... [more]
A0A8C5PHJ0_9ANUR7.920e-5745.58Ubiquitination factor E4B n=3 Tax=Anura TaxID=8342... [more]
A0A6P6M8Q6_CARAU8.460e-5745.13ubiquitin conjugation factor E4 B-like isoform X2 ... [more]
A0A6P6M9U0_CARAU8.520e-5745.13ubiquitin conjugation factor E4 B-like isoform X1 ... [more]
A0A673I932_9TELE9.180e-5744.25Ubiquitin conjugation factor E4 B-like n=7 Tax=Cyp... [more]
Q8JIX0_DANRE1.090e-5645.13Ubiquitination factor E4/UFD2 n=19 Tax=Otophysi Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 166..228
e-value: 1.5E-22
score: 90.9
IPR003613U box domainPFAMPF04564U-boxcoord: 163..232
e-value: 8.8E-28
score: 96.3
IPR003613U box domainPROSITEPS51698U_BOXcoord: 162..235
score: 28.476
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 162..233
e-value: 6.4E-25
score: 89.0
IPR019474Ubiquitin conjugation factor E4, corePFAMPF10408Ufd2P_corecoord: 2..146
e-value: 3.7E-48
score: 164.6
NoneNo IPR availablePANTHERPTHR13931UBIQUITINATION FACTOR E4coord: 1..229
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 150..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83070contigM-pyrifera_M_contig83070:26..856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83070.19403.1mRNA_M-pyrifera_M_contig83070.19403.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig83070 26..856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig83070.19403.1 ID=prot_M-pyrifera_M_contig83070.19403.1|Name=mRNA_M-pyrifera_M_contig83070.19403.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp
QQERAEKEQEFGQSERTVQSYMQLVNAVVSLFHSIASEVPDACMRPELVE
RIANFLNYYLSLLAGPKCRELKVENKDKYHFEPKTLLGEIVDIYVHLNCS
TFRDACANDGRSYADTTYRSAIDIVSRLGLRSEKTLKLFAEFVAGVQQRS
EEKKTADIALDDAPDEYLDPIMSEVMKDPVRLPSGNIVDRSVISRHLLSD
PTDPFTRGPLTLQDLEPMQELKEEIQGWLLSKGISL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR019474Ub_conjug_fac_E4_core