mRNA_M-pyrifera_M_contig83025.19397.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83025.19397.1
Unique NamemRNA_M-pyrifera_M_contig83025.19397.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A7S2APK1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APK1_9STRA)

HSP 1 Score: 342 bits (877), Expect = 7.450e-117
Identity = 165/231 (71.43%), Postives = 194/231 (83.98%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIA+ENIHSEVYSLLID YV D ++K  L RAIETVPCV KKA WALKW  A  +SFAER++AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACL+Y  LE KLP ER+ EII +AV+ EKEFV ++LPV+LIGMN+  M +YIEF ADRL++ALG    Y ++NPF WMELISL+GK+NFFEKRV +Y+ A VG ++S+ +F +D DF
Sbjct:   14 RCFYGFQIAMENIHSEVYSLLIDTYVRDVEQKDHLLRAIETVPCVTKKANWALKWCSADLSSFAERVIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLIYQKLENKLPSERITEIISSAVEMEKEFVRDSLPVELIGMNSGSMCQYIEFCADRLLQALGVSKKYNSMNPFDWMELISLQGKTNFFEKRVGEYAKAGVGAEKSESVFDLDCDF 244
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A5A8DNK3_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DNK3_CAFRO)

HSP 1 Score: 345 bits (886), Expect = 2.100e-116
Identity = 170/230 (73.91%), Postives = 195/230 (84.78%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDED 690
            RCFYGFQIAIENIHSEVYSLLID YV DK EK  LFRAIETVPCV KKAEWAL+WT+++ ASFAER+VAFAAVEGIFFSGSFCAIFW+KKRG+MPGLCFSNELISRDEGLHCDFACL+YSML+ KL    V++II AAV+ EKEFVTEALPV+LIGMN+ LM +YIEFVADRL+ +LG   ++   NPF WMELIS++GK+NFFEKRV +YS + VG    D  F+ D D
Sbjct:  134 RCFYGFQIAIENIHSEVYSLLIDTYVKDKDEKASLFRAIETVPCVSKKAEWALRWTNSETASFAERIVAFAAVEGIFFSGSFCAIFWMKKRGLMPGLCFSNELISRDEGLHCDFACLMYSMLQEKLAPGAVQDIIVAAVECEKEFVTEALPVELIGMNSKLMQEYIEFVADRLLVSLGVPKVWATSNPFEWMELISMDGKTNFFEKRVGEYSKSGVGATGDDRTFAGDTD 363
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: B8C9R1_THAPS (Uncharacterized protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9R1_THAPS)

HSP 1 Score: 342 bits (877), Expect = 4.650e-116
Identity = 166/231 (71.86%), Postives = 188/231 (81.39%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIA+ENIHSE YSLLID Y+ D  EK  L  AIETVPCV+KKA WALKW DA  ASFAER++AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACLLYS L  KLPE R+ +II  AV+ EKEFV++ALPV+LIGMN+ LM  YIEF ADRL+ ALG    Y A NPF WME+ISL+GK+NFFEKRV +Y+ + VG  + D +F  D DF
Sbjct:   67 RCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHWALKWCDAGNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKLPESRITKIITVAVEIEKEFVSDALPVELIGMNSKLMCDYIEFCADRLLGALGCSKFYNATNPFEWMEMISLQGKTNFFEKRVGEYAKSGVGVNKDDQVFCTDADF 297
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: K0RPZ7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPZ7_THAOC)

HSP 1 Score: 346 bits (887), Expect = 5.450e-115
Identity = 166/231 (71.86%), Postives = 194/231 (83.98%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIA+ENIHSE YSLLID Y+ D+ +KM L  AIETVPCV+KKA WALKW D++ ASFAER +AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACLLYS L  K+PE R+ EI+  AV+ EKEFV +ALPV+LIGMN+ LM +YIEF ADRL+ ALG   IY+A NPF WME+ISL+GK+NFFEKRV +YS + VG  + + +FS+D DF
Sbjct:  250 RCFYGFQIAVENIHSETYSLLIDTYIKDQADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPESRIVEIVTHAVEIEKEFVVDALPVELIGMNSGLMCQYIEFCADRLLHALGCSKIYKASNPFEWMEMISLQGKTNFFEKRVGEYSKSGVGVNKDEQVFSLDCDF 480
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A7S2F600_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F600_9STRA)

HSP 1 Score: 341 bits (875), Expect = 7.540e-115
Identity = 165/231 (71.43%), Postives = 193/231 (83.55%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIA+ENIHSEVYSLLID YV D  +K  L RAIETVPCV KKA WALKW  A  +SFAER++AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACL+Y  LE KLP ER+ EII +AV+ EKEFV ++LPV+LIGMN+  M +YIEF ADRL++ALG    Y ++NPF WMELISL+GK+NFFEKRV +Y+ A VG ++S+ +F +D DF
Sbjct:  129 RCFYGFQIAMENIHSEVYSLLIDTYVRDVDQKDHLLRAIETVPCVTKKANWALKWCSADLSSFAERVIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLIYQKLENKLPSERITEIISSAVEMEKEFVRDSLPVELIGMNSGSMCQYIEFCADRLLQALGVSKKYNSMNPFDWMELISLQGKTNFFEKRVGEYAKAGVGAEKSESVFDLDCDF 359
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A1Z9AII9_9BACT (Ribonucleoside-diphosphate reductase n=2 Tax=bacterium TMED88 TaxID=1986661 RepID=A0A1Z9AII9_9BACT)

HSP 1 Score: 339 bits (869), Expect = 7.650e-115
Identity = 165/231 (71.43%), Postives = 190/231 (82.25%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIA+ENIHSE YSLLID YV D+ EKM L  AIETVP V+KKA+WALKW DA  ASFAER++AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACLLY  L  KLPE R+ EII  AV+ EKEFV ++LPV+LIGMN+ LM +YIEF ADRL+ ALG +  Y   NPF WME+ISL+GK+NFFEKRV +Y+ + VG    D +FS+D +F
Sbjct:   67 RCFYGFQIAVENIHSETYSLLIDTYVKDQTEKMHLLHAIETVPSVRKKAKWALKWCDANNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYKKLVNKLPETRIVEIITNAVEIEKEFVVDSLPVELIGMNSGLMCEYIEFCADRLLGALGCDKYYNGKNPFEWMEMISLQGKTNFFEKRVGEYAKSGVGVSAEDQVFSIDAEF 297
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: D7FMW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMW5_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.500e-114
Identity = 167/231 (72.29%), Postives = 190/231 (82.25%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIAIENIHSEVYSLLID YV D  EK  LF A+ETVPCV++KA WAL+W D K AS+AERLVAFAAVEGIFFSGSFCA+FWLKKRG+MPGLCFSNELISRDEGLH DFACLL+  L  KLP ERV EIIC AVD EKEF+T ALPV+LIGMN+ LM +YIEF ADRL+  LG E  Y + NPF WME+ISL+GK+NFFEKRV +YS + VG   +D  F+++ DF
Sbjct:  150 RCFYGFQIAIENIHSEVYSLLIDTYVKDAAEKTHLFNAMETVPCVRRKARWALRWCDPKLASYAERLVAFAAVEGIFFSGSFCAVFWLKKRGLMPGLCFSNELISRDEGLHTDFACLLFRKLVNKLPVERVAEIICDAVDIEKEFITSALPVELIGMNSALMRQYIEFCADRLLMELGCEKKYNSTNPFDWMEMISLQGKTNFFEKRVGEYSKSGVGVDAADQEFTLEADF 380
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A5N1J0E9_9BACT (Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Adhaeribacter TaxID=299566 RepID=A0A5N1J0E9_9BACT)

HSP 1 Score: 337 bits (863), Expect = 1.320e-113
Identity = 167/231 (72.29%), Postives = 191/231 (82.68%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQI +ENIHSE YSLLID Y+ D KEK  LF A+ETVPCVKKK EWALKW +++  +F ERL+AFAAVEGIFFSGSFC+IFWLKKRG+MPGL FSNELISRDEGLHCDFACLLYSMLE KLPE R+  II  AV  E+EFVT+ALPV LIGMNA LM +YIEFVADRL+ ALG   IY + NPF +ME+ISL+GK+NFFEKRV +Y  A V  + SD +FS+DEDF
Sbjct:   91 RCFYGFQIMMENIHSETYSLLIDTYIKDPKEKDHLFNALETVPCVKKKGEWALKWINSE--NFTERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSMLENKLPESRLHAIIKDAVTIEQEFVTDALPVSLIGMNATLMNQYIEFVADRLLVALGASKIYNSTNPFDFMEMISLQGKTNFFEKRVGEYQKAGVMTERSDNVFSLDEDF 319
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A5D6XR10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR10_9STRA)

HSP 1 Score: 339 bits (870), Expect = 1.500e-113
Identity = 164/231 (71.00%), Postives = 194/231 (83.98%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            RCFYGFQIAIENIHSEVYSLLID  + D+ EK  LFRAIET+PCV KKA+WALKW D++ A++AER++AFAAVEGIFFSGSFC+IFWLKKRG+MPGL FSNELISRDEGLHCDFACL+YS L  KLPE RV EI+  AV  EKEFV ++LPV+LIGMN+ LM +YIEFVADRL+ ALG   +Y A NPF WM++ISL+GK+NFFEKRV +YS A VG   +D +F++D DF
Sbjct:  167 RCFYGFQIAIENIHSEVYSLLIDTLIKDQSEKTHLFRAIETIPCVTKKAQWALKWCDSRAAAYAERILAFAAVEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRDEGLHCDFACLMYSKLVNKLPEARVHEIVQDAVVIEKEFVRDSLPVELIGMNSALMCQYIEFVADRLLHALGVSKVYGATNPFDWMDMISLQGKTNFFEKRVGEYSKAGVGVAAADQVFTLDADF 397
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BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Match: A0A6U3SYI4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SYI4_9STRA)

HSP 1 Score: 339 bits (869), Expect = 2.660e-113
Identity = 166/231 (71.86%), Postives = 187/231 (80.95%), Query Frame = 1 
Query:    1 RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAEWALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFSNELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEALPVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGKSNFFEKRVSDYSIAHVGRQESDMIFSMDEDF 693
            R FYGFQIA+ENIHSE YSLLID Y+ D+K K  L  AIETVPCV+KKA WAL+W DA  ASFAER++AFAAVEGIFFSGSFCAIFWLKKRG+MPGLCFSNELISRDEGLHCDFACLLYS L  KLP  R+ EII  AV+ EKEFV +ALPV LIGMN DLM +YIEF ADRL+ ALG    Y A NPF WME+ISL+GK+NFFEKRV +Y+ + VG    D +FS+D DF
Sbjct:  174 RFFYGFQIAVENIHSETYSLLIDTYIKDQKTKAHLLNAIETVPCVQKKASWALQWCDANNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKLPTSRIEEIITNAVEIEKEFVVDALPVSLIGMNGDLMCQYIEFCADRLLAALGCPKHYGAANPFEWMEMISLQGKTNFFEKRVGEYAKSGVGVSAEDQVFSLDADF 404
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83025.19397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2APK1_9STRA7.450e-11771.43Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A5A8DNK3_CAFRO2.100e-11673.91Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
B8C9R1_THAPS4.650e-11671.86Uncharacterized protein n=2 Tax=Thalassiosira pseu... [more]
K0RPZ7_THAOC5.450e-11571.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2F600_9STRA7.540e-11571.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z9AII9_9BACT7.650e-11571.43Ribonucleoside-diphosphate reductase n=2 Tax=bacte... [more]
D7FMW5_ECTSI1.500e-11472.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5N1J0E9_9BACT1.320e-11372.29Ribonucleoside-diphosphate reductase subunit beta ... [more]
A0A5D6XR10_9STRA1.500e-11371.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6U3SYI4_9STRA2.660e-11371.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83025contigM-pyrifera_M_contig83025:205..900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.2
Seed ortholog evalue3e-93
Seed eggNOG ortholog159749.K0RPZ7
Preferred nameRNR2
KEGG rclassRC00613,RC01003
KEGG koko:K10808
KEGG ReactionR02017,R02019,R02024,R08363,R08364,R11893
KEGG Pathwayko00230,ko00240,ko00480,ko00983,ko01100,ko04115,map00230,map00240,map00480,map00983,map01100,map04115
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004748,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006240,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009165,GO:0009185,GO:0009186,GO:0009189,GO:0009193,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009215,GO:0009216,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0032991,GO:0034641,GO:0034654,GO:0042278,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046062,GO:0046131,GO:0046385,GO:0046483,GO:0046704,GO:0051063,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0072521,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1902494,GO:1990204
EggNOG free text desc.Ribonucleotide reductase, small chain
EggNOG OGs2XAYV@2836,COG1678@1,KOG1567@2759
Ec32 ortholog descriptionEsV-1-128 ribonucleotide reductase
Ec32 orthologEc-06_005570.1
EC1.17.4.1
COG Functional cat.F
BiGG ReactioniMM904.YGR180C,iMM904.YJL026W,iND750.YGR180C,iND750.YJL026W
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Exons1
Model size696
Cds size696
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816737.3768115-CDS-M-pyrifera_M_contig83025:204..9001622816737.3768115-CDS-M-pyrifera_M_contig83025:204..900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83025 205..900 -
1692278148.8123953-CDS-M-pyrifera_M_contig83025:204..9001692278148.8123953-CDS-M-pyrifera_M_contig83025:204..900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83025 205..900 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83025.19397.1prot_M-pyrifera_M_contig83025.19397.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83025 205..900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83025.19397.1

>prot_M-pyrifera_M_contig83025.19397.1 ID=prot_M-pyrifera_M_contig83025.19397.1|Name=mRNA_M-pyrifera_M_contig83025.19397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
RCFYGFQIAIENIHSEVYSLLIDKYVTDKKEKMRLFRAIETVPCVKKKAE
WALKWTDAKFASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGIMPGLCFS
NELISRDEGLHCDFACLLYSMLETKLPEERVREIICAAVDAEKEFVTEAL
PVDLIGMNADLMTKYIEFVADRLVKALGHEAIYEAVNPFPWMELISLEGK
SNFFEKRVSDYSIAHVGRQESDMIFSMDEDF*
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mRNA from alignment at M-pyrifera_M_contig83025:205..900-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83025.19397.1 ID=mRNA_M-pyrifera_M_contig83025.19397.1|Name=mRNA_M-pyrifera_M_contig83025.19397.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig83025:205..900- (Macrocystis pyrifera P11B4 male)
CGTTGCTTCTATGGTTTCCAAATTGCGATTGAAAACATTCACAGTGAAGT
GTACAGCTTGTTGATTGACAAGTACGTGACGGACAAGAAAGAGAAGATGC
GACTCTTCCGTGCGATTGAAACTGTGCCATGTGTCAAGAAGAAGGCGGAG
TGGGCACTCAAGTGGACCGATGCCAAGTTTGCTTCTTTCGCCGAGCGTCT
TGTCGCGTTTGCTGCAGTGGAGGGGATCTTCTTCAGTGGAAGTTTTTGTG
CCATCTTCTGGCTCAAGAAGCGTGGTATCATGCCAGGTCTCTGCTTCAGC
AATGAGCTCATCTCCAGGGATGAAGGATTGCATTGTGATTTTGCTTGCCT
GCTTTACTCCATGCTTGAAACCAAGTTGCCAGAAGAACGAGTGCGGGAAA
TTATCTGTGCTGCAGTGGATGCAGAGAAGGAATTCGTCACAGAGGCACTT
CCTGTCGACCTCATTGGCATGAACGCAGATCTTATGACAAAGTACATCGA
GTTTGTTGCAGACAGACTCGTCAAAGCACTTGGTCACGAAGCAATTTACG
AAGCTGTCAACCCATTTCCATGGATGGAACTCATCTCACTTGAAGGAAAG
TCCAACTTCTTCGAAAAGAGGGTATCAGACTACTCCATTGCTCATGTCGG
GAGGCAAGAGTCGGATATGATCTTCTCCATGGATGAAGACTTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83025:205..900-

>mRNA_M-pyrifera_M_contig83025.19397.1 ID=mRNA_M-pyrifera_M_contig83025.19397.1|Name=mRNA_M-pyrifera_M_contig83025.19397.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig83025:205..900- (Macrocystis pyrifera P11B4 male)
CGTTGCTTCTATGGTTTCCAAATTGCGATTGAAAACATTCACAGTGAAGT
GTACAGCTTGTTGATTGACAAGTACGTGACGGACAAGAAAGAGAAGATGC
GACTCTTCCGTGCGATTGAAACTGTGCCATGTGTCAAGAAGAAGGCGGAG
TGGGCACTCAAGTGGACCGATGCCAAGTTTGCTTCTTTCGCCGAGCGTCT
TGTCGCGTTTGCTGCAGTGGAGGGGATCTTCTTCAGTGGAAGTTTTTGTG
CCATCTTCTGGCTCAAGAAGCGTGGTATCATGCCAGGTCTCTGCTTCAGC
AATGAGCTCATCTCCAGGGATGAAGGATTGCATTGTGATTTTGCTTGCCT
GCTTTACTCCATGCTTGAAACCAAGTTGCCAGAAGAACGAGTGCGGGAAA
TTATCTGTGCTGCAGTGGATGCAGAGAAGGAATTCGTCACAGAGGCACTT
CCTGTCGACCTCATTGGCATGAACGCAGATCTTATGACAAAGTACATCGA
GTTTGTTGCAGACAGACTCGTCAAAGCACTTGGTCACGAAGCAATTTACG
AAGCTGTCAACCCATTTCCATGGATGGAACTCATCTCACTTGAAGGAAAG
TCCAACTTCTTCGAAAAGAGGGTATCAGACTACTCCATTGCTCATGTCGG
GAGGCAAGAGTCGGATATGATCTTCTCCATGGATGAAGACTTCTAACGTT
GCTTCTATGGTTTCCAAATTGCGATTGAAAACATTCACAGTGAAGTGTAC
AGCTTGTTGATTGACAAGTACGTGACGGACAAGAAAGAGAAGATGCGACT
CTTCCGTGCGATTGAAACTGTGCCATGTGTCAAGAAGAAGGCGGAGTGGG
CACTCAAGTGGACCGATGCCAAGTTTGCTTCTTTCGCCGAGCGTCTTGTC
GCGTTTGCTGCAGTGGAGGGGATCTTCTTCAGTGGAAGTTTTTGTGCCAT
CTTCTGGCTCAAGAAGCGTGGTATCATGCCAGGTCTCTGCTTCAGCAATG
AGCTCATCTCCAGGGATGAAGGATTGCATTGTGATTTTGCTTGCCTGCTT
TACTCCATGCTTGAAACCAAGTTGCCAGAAGAACGAGTGCGGGAAATTAT
CTGTGCTGCAGTGGATGCAGAGAAGGAATTCGTCACAGAGGCACTTCCTG
TCGACCTCATTGGCATGAACGCAGATCTTATGACAAAGTACATCGAGTTT
GTTGCAGACAGACTCGTCAAAGCACTTGGTCACGAAGCAATTTACGAAGC
TGTCAACCCATTTCCATGGATGGAACTCATCTCACTTGAAGGAAAGTCCA
ACTTCTTCGAAAAGAGGGTATCAGACTACTCCATTGCTCATGTCGGGAGG
CAAGAGTCGGATATGATCTTCTCCATGGATGAAGACTTCTAA
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