mRNA_M-pyrifera_M_contig82978.19383.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82978.19383.1
Unique NamemRNA_M-pyrifera_M_contig82978.19383.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A843U263_COLES (N-alpha-acetyltransferase 40 n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U263_COLES)

HSP 1 Score: 64.7 bits (156), Expect = 1.340e-10
Identity = 33/60 (55.00%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:   19 EDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            +DG   VG+VH+RFI E    V YV+ELQ E++V+G+GLG+++M LIELI+LK  M+ VM
Sbjct:   95 DDGDRVVGFVHYRFIVEEDIPVVYVYELQLESSVQGKGLGKFLMQLIELIALKNHMEAVM 154
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: UPI000DECB5CB (uncharacterized protein LOC112802399 isoform X2 n=2 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DECB5CB)

HSP 1 Score: 60.1 bits (144), Expect = 5.250e-9
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:    1 ASKAAAEDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            AS +  ED    VG+VH+RF+ E    V YV+ELQ E  V+G+GLG+++M LIELI+ K  M  VM
Sbjct:  141 ASTSCVEDSGPLVGFVHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKNCMGAVM 206
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A1U8AWW3_NELNU (N-alpha-acetyltransferase 40 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AWW3_NELNU)

HSP 1 Score: 59.7 bits (143), Expect = 5.440e-9
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1 
Query:   22 DGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            DG   VG+VH+RFI E    + YV+ELQ EA V+GRGLG+++M LIELI+ K  M  VM
Sbjct:  139 DGDPLVGFVHYRFIVEEDVPLVYVYELQLEARVQGRGLGKFLMQLIELIARKNHMGAVM 197
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A6P5NVH0_ARADU (N-alpha-acetyltransferase 40 n=5 Tax=Arachis TaxID=3817 RepID=A0A6P5NVH0_ARADU)

HSP 1 Score: 60.1 bits (144), Expect = 5.440e-9
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:    1 ASKAAAEDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            AS +  ED    VG+VH+RF+ E    V YV+ELQ E  V+G+GLG+++M LIELI+ K  M  VM
Sbjct:  143 ASTSCVEDSGPLVGFVHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKNCMGAVM 208
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A444Z1I3_ARAHY (N-alpha-acetyltransferase 40 n=4 Tax=Arachis TaxID=3817 RepID=A0A444Z1I3_ARAHY)

HSP 1 Score: 59.3 bits (142), Expect = 7.640e-9
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:    1 ASKAAAEDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            AS +  ED    VG++H+RF+ E    V YV+ELQ E  V+G+GLG+++M LIELI+ K  M  VM
Sbjct:  143 ASTSCVEDSGPLVGFLHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKKCMGAVM 208
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: UPI0010AAFB1D (N-alpha-acetyltransferase 40-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AAFB1D)

HSP 1 Score: 58.2 bits (139), Expect = 8.600e-9
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1 
Query:    4 SKAAAEDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLK 177
            + A+ E+    VG+VHFRF+ E    V YV+ELQ E  V+G+GLG+++M LIELI+ K
Sbjct:   50 TSASCEERGPMVGFVHFRFVIEEELPVLYVYELQLEPRVQGKGLGKFLMQLIELIARK 107
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: M7YLX6_TRIUA (N-alpha-acetyltransferase 40 n=2 Tax=Triticum TaxID=4564 RepID=M7YLX6_TRIUA)

HSP 1 Score: 58.9 bits (141), Expect = 1.010e-8
Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 1 
Query:   25 GWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            G   +G+VH+RF+ E    V YV+ELQ E++V+G+GLG+++M LIELI+ K  M+ VM
Sbjct:  144 GGRLLGFVHYRFVVEEDVPVLYVYELQLESSVQGKGLGKFLMQLIELIACKSQMEAVM 201
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A453PPR1_AEGTS (N-alpha-acetyltransferase 40 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PPR1_AEGTS)

HSP 1 Score: 57.4 bits (137), Expect = 1.080e-8
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 1 
Query:   25 GWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            G   +G+VH+RF+ E    V YV+ELQ E++V+G+GLG+++M LIELI+ K  M  VM
Sbjct:   58 GGRLLGFVHYRFVVEEDVPVLYVYELQLESSVQGKGLGKFLMQLIELIACKSQMGAVM 115
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BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A9NRE4_PICSI (N-alpha-acetyltransferase 40 n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NRE4_PICSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.120e-8
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   22 DGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            DG   V +VH+RFI E    V YV+ELQ E  V+GRGLG+++M LIELI+ K  M+ VM
Sbjct:  150 DGDPVVAFVHYRFIVEEEIPVVYVYELQLEQCVQGRGLGKFLMQLIELIARKNHMKAVM 208
[Close]
BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Match: A0A835MA65_9MAGN (N-alpha-acetyltransferase 40 n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835MA65_9MAGN)

HSP 1 Score: 57.8 bits (138), Expect = 1.330e-8
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   22 DGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMMNLIELISLKVSMQWVM 198
            DG   VG+VH+RF+ E    V YV+ELQ E  V+G+GLG+++M LIELI+ K  M  VM
Sbjct:   61 DGDPVVGFVHYRFVVEEDVPVCYVYELQLERHVQGKGLGKFLMQLIELIACKSRMGAVM 119
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82978.19383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A843U263_COLES1.340e-1055.00N-alpha-acetyltransferase 40 n=1 Tax=Colocasia esc... [more]
UPI000DECB5CB5.250e-950.00uncharacterized protein LOC112802399 isoform X2 n=... [more]
A0A1U8AWW3_NELNU5.440e-955.93N-alpha-acetyltransferase 40 n=1 Tax=Nelumbo nucif... [more]
A0A6P5NVH0_ARADU5.440e-950.00N-alpha-acetyltransferase 40 n=5 Tax=Arachis TaxID... [more]
A0A444Z1I3_ARAHY7.640e-948.48N-alpha-acetyltransferase 40 n=4 Tax=Arachis TaxID... [more]
UPI0010AAFB1D8.600e-950.00N-alpha-acetyltransferase 40-like n=1 Tax=Malus do... [more]
M7YLX6_TRIUA1.010e-850.00N-alpha-acetyltransferase 40 n=2 Tax=Triticum TaxI... [more]
A0A453PPR1_AEGTS1.080e-850.00N-alpha-acetyltransferase 40 n=1 Tax=Aegilops taus... [more]
A9NRE4_PICSI1.120e-854.24N-alpha-acetyltransferase 40 n=1 Tax=Picea sitchen... [more]
A0A835MA65_9MAGN1.330e-852.54N-alpha-acetyltransferase 40 n=1 Tax=Coptis chinen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82978contigM-pyrifera_M_contig82978:1..198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score60.1
Seed ortholog evalue4.6e-07
Seed eggNOG ortholog4432.XP_010271137.1
KEGG koko:K20794
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0010485,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0043967,GO:0043968,GO:0043998,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051276,GO:0051604,GO:0061733,GO:0071704,GO:0071840,GO:1901564,GO:1990189
EggNOG free text desc.N-alpha-acetyltransferase 40
EggNOG OGs37K8H@33090,3GAF5@35493,KOG2488@1,KOG2488@2759
EC2.3.1.257
COG Functional cat.S
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816736.5656326-CDS-M-pyrifera_M_contig82978:0..1981622816736.5656326-CDS-M-pyrifera_M_contig82978:0..198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82978 1..198 -
1692278148.266797-CDS-M-pyrifera_M_contig82978:0..1981692278148.266797-CDS-M-pyrifera_M_contig82978:0..198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82978 1..198 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82978.19383.1prot_M-pyrifera_M_contig82978.19383.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82978 1..198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82978.19383.1

>prot_M-pyrifera_M_contig82978.19383.1 ID=prot_M-pyrifera_M_contig82978.19383.1|Name=mRNA_M-pyrifera_M_contig82978.19383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
ASKAAAEDGWEPVGYVHFRFIPEGVHVVTYVFELQGEAAVRGRGLGRYMM
NLIELISLKVSMQWVM
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mRNA from alignment at M-pyrifera_M_contig82978:1..198-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82978.19383.1 ID=mRNA_M-pyrifera_M_contig82978.19383.1|Name=mRNA_M-pyrifera_M_contig82978.19383.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig82978:1..198- (Macrocystis pyrifera P11B4 male)
GCATCCAAAGCTGCTGCGGAAGATGGGTGGGAGCCTGTGGGATATGTACA
TTTTCGCTTCATTCCTGAGGGAGTTCATGTGGTGACGTATGTATTCGAAC
TGCAAGGGGAAGCTGCTGTCCGTGGACGTGGACTTGGTCGGTACATGATG
AATTTGATTGAGTTGATTTCGCTCAAAGTATCAATGCAATGGGTGATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82978:1..198-

>mRNA_M-pyrifera_M_contig82978.19383.1 ID=mRNA_M-pyrifera_M_contig82978.19383.1|Name=mRNA_M-pyrifera_M_contig82978.19383.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig82978:1..198- (Macrocystis pyrifera P11B4 male)
GCATCCAAAGCTGCTGCGGAAGATGGGTGGGAGCCTGTGGGATATGTACA
TTTTCGCTTCATTCCTGAGGGAGTTCATGTGGTGACGTATGTATTCGAAC
TGCAAGGGGAAGCTGCTGTCCGTGGACGTGGACTTGGTCGGTACATGATG
AATTTGATTGAGTTGATTTCGCTCAAAGTATCAATGCAATGGGTGATGGC
ATCCAAAGCTGCTGCGGAAGATGGGTGGGAGCCTGTGGGATATGTACATT
TTCGCTTCATTCCTGAGGGAGTTCATGTGGTGACGTATGTATTCGAACTG
CAAGGGGAAGCTGCTGTCCGTGGACGTGGACTTGGTCGGTACATGATGAA
TTTGATTGAGTTGATTTCGCTCAAAGTATCAATGCAATGGGTGATG
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