mRNA_M-pyrifera_M_contig8297.19381.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8297.19381.1
Unique NamemRNA_M-pyrifera_M_contig8297.19381.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: D8LNB7_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB7_ECTSI)

HSP 1 Score: 748 bits (1931), Expect = 9.050e-235
Identity = 534/984 (54.27%), Postives = 585/984 (59.45%), Query Frame = 1 
Query:    1 KTLIVDSPASMTSYVCRLHPFPDGVASSTGLQVVSRAVASRQKAEADADAALAXXXXXXXXXXXXTTEEAARDAGKAASAVEVWQAAERLVEGSVGEGASSS------RSAGSLLASLSRLRGALRRCTKGGSVGXXXXXXXXXXXXXXXXAWEAMPAAVHLEASRLAGEIGAVDPYDVELAERASARGGGRWAGLGPDSSPSKNASSSLEDPLSGPKMQALRLMASYLTDRDEGLSSCALCTAKALLSREA-TNERLLKASSFEVQALLQPFTARLAQMNTVRTASRVWNGLFGSAHASSIGGXXXXXXXXERVETAGLALSFEVWTTSGKTFAQWVCRLTSALLLECYAGVASESFRNASSKGGGEDPTFPPRPPGRRPVSGHALLFGSKPPLEGKDEMLALCYALCQRKPELAACLFPAIVYDLVRSHDGLENAD-------EGDSSRGGTNRAASELSAAFREHLF-CVDG-SLGDGSRVNPQAVALGIEVLNFLRGRQVSAFLRHHRQGKRTHTGAGXXXXXXXXXSADGKDTPP---SSRWLEWAGKGREKDGGSGLPFGYYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAE----GEEKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTCGRPWGPALGGGSLFGCAGSAAGGXXXXXXPGGGSGRTVFHEHVFQALGSLRQRNARVFESAIGNARALALARLRSGGGGQ-EGGKGLYPCLVQLQCVVEMEEMFSVLS---GAGVDGGRGGHATDDAAEALMERWRARSAPVQEHFESLEPALALR 2871
            K+L+VDSPASMT  V RLHPFPD  + S GLQ VSRA+A+R++ EA +  A A XXXXXXXXXXX                EVWQAA+RLVEG+ GEG +SS      R+AGSLLA+LS LR ALRR                         WE +                                G G       DS          EDPLS PK                           ALLSR    NERLLKAS  EVQALL PFT+RLA+MNT R A+RVW+GLFG A +S   G          V   G ALS  VWTT+GKTF QWVC +TSALLLECYAGV S  F+NA+SKG                           P LEG+DEMLALCYALC+RK ELAACL PAIVYDLVRSHD  E  +               +N AA+ELSAAFR HLF   +G   G+   VNPQA ALG+EVLNFLRGRQ++AFL H            XXXXXXXXX            S RWL WAG+GR  DGGSGLPFGYYLDLD L VARAAA+ GAQCSALFYAEAWIEG+FGE+AGITASRWRDQGEG+GGDGLD                               G EKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGW+NTLPAYDTLLQ           XXXXXXXX      LL+      PG GLQTGVAASLQRMGLRHVLEHYLRGLRVGPASL GLPDLDGDLR+MQFESAWRM EWDP L+T  + ++ +                            XXXXXX    SGR VFHEH+ QALGSLRQRNA VF SA+GNAR+LALARL SGGG   EGGKGLYPCLVQLQCV E+EE F V S   G              AAE LMERWRARS PV+EHFESLEP LALR
Sbjct: 1908 KSLVVDSPASMTGLVSRLHPFPDESSFSPGLQAVSRALATRKELEALSSPANAAXXXXXXXXXXXXXXX---------XXXEVWQAADRLVEGTAGEGGASSSTSSSCRTAGSLLANLSHLRAALRR-------------------------WEGLALT-----------------------------GAGXXXXXXRDS----------EDPLSAPK---------------------------ALLSRGVGANERLLKASPAEVQALLGPFTSRLARMNTARMAARVWDGLFGDARSS---GSDGGAGGGRSVSPPGSALSDGVWTTAGKTFPQWVCGVTSALLLECYAGVTSRCFQNAASKGXXXXXXXXXXXXXXXXXX-XXXXXPQGPQLEGRDEMLALCYALCRRKSELAACLLPAIVYDLVRSHDDDETGNGXXXXXXXXXXXXDNSNLAATELSAAFRRHLFHLAEGREEGEDGGVNPQAAALGVEVLNFLRGRQIAAFLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCRWLGWAGEGRGDDGGSGLPFGYYLDLDALGVARAAARSGAQCSALFYAEAWIEGRFGEAAGITASRWRDQGEGSGGDGLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGREKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQSGHQRPPLAAGXXXXXXXXX----SLLLP-----PGIGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLRGLPDLDGDLRDMQFESAWRMSEWDPALSTFTNGAADNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADSSGRPVFHEHILQALGSLRQRNASVFSSAVGNARSLALARLGSGGGASLEGGKGLYPCLVQLQCVAELEEAFEVFSAPAGGAQXXXXXXXXXXXAAETLMERWRARSVPVEEHFESLEPVLALR 2778
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A6H5KI56_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI56_9PHAE)

HSP 1 Score: 645 bits (1665), Expect = 1.520e-200
Identity = 445/742 (59.97%), Postives = 496/742 (66.85%), Query Frame = 1 
Query:    1 KTLIVDSPASMTSYVCRLHPFPDGVASST-GLQVVSRAVASRQKAE---ADADAALAXXXXXXXXXXXXTTEEAARDAGKAASAVEVWQAAERLVEGSVGEGASSS------RSAGSLLASLSRLRGALRRCTKGGSVGXXXXXXXXXXXXXXXXAWEAM-------------------------PAAVHLEASRLAGEIGAVDPYDVELAERASARGGGRWAGL---GPDSSPSKNASSSLEDPLSGPKMQALRLMASYLTDRDEGLSSCALCTAKALLSREA-TNERLLKASSFEVQALLQPFTARLAQMNTVRTASRVWNGLFGSAHASSIGGXXXXXXXXERVETAGLALSFEVWTTSGKTFAQWVCRLTSALLLECYAGVASESFRNASSKGGGEDPTFPPRPPGRRPVSGHALLFGSKPPLEGKDEMLALCYALCQRKPELAACLFPAIVYDLVRSHDGLENADEGDSSRG-------GTNRAASELSAAFREHLFCV--DGSLGDGSRVNPQAVALGIEVLNFLRGRQVSAFLRHHRQGKRTHTGAGXXXXXXXXXSADGKDTPPSS-RWLEWAGKGREKDGGSGLPFGYYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEG-EEKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWQNTLPAYDTLLQ 2076
            K+L+VDSPASMT +V RLHPFPD  +SS+ GLQ VSRA+A+R++ E   + A+AA AXXXXXXXXXXXX    A+          EVWQAAERLV+G+ GEG +SS      R+AGSLLA+LS LR ALRR T GGS     XXXXXXXX     AWEAM                         P AVHLEA RLAGEIGAVDPYDVELAERASARGGGRW GL   G  +      SSS EDPLS PK++ALR++ASYLTDRD  LS+CALCTAKALLSR   +NERLLKAS  EVQALL PFT RLA+MNT R A+RVW+GLFG   +S   G          +   G ALS EVWTT+GKTF +WVC +TSALLLECYAGV S  F+NA+SKG                        G  P +EG+DEMLALCYALC+RK ELAACL PAIVYDLVRSHD  E+ +               +N AA+ELSAAFR HLF +   G  G+   VN QA ALG+EVLNFLRGRQ++AFL H            XXXXXXXXX          S RWL WAG+GR  DGGSGLPFGYYLDLD L VARAAAQ GAQCSALFYAEAWIEG+FGE+AGITASRWRDQGEG+GGDGLD                              EKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGW+NTLPAYDTLLQ
Sbjct: 1920 KSLVVDSPASMTGHVSRLHPFPDESSSSSPGLQAVSRALATRKELEVLSSPANAASAXXXXXXXXXXXXXXXXAS----------EVWQAAERLVDGTAGEGGASSSTSSSCRTAGSLLANLSHLRAALRRYT-GGSX----XXXXXXXXACHGGAWEAMSAGPRGVALARAAVGAVVRVCRSERPPAVHLEAMRLAGEIGAVDPYDVELAERASARGGGRWEGLALTGAGAGAGGRDSSSSEDPLSAPKVRALRMLASYLTDRDADLSACALCTAKALLSRGVGSNERLLKASPAEVQALLGPFTFRLARMNTARMAARVWDGLFGDTRSS---GRDGGEEEGYSLSPPGPALSDEVWTTAGKTFPRWVCGVTSALLLECYAGVTSRCFKNAASKGXXXXXXXXXXXXXXXXXXXXXPRRG--PRVEGRDEMLALCYALCRRKSELAACLLPAIVYDLVRSHDDDESGNXXXXXXXXXXXXXDNSNLAATELSAAFRRHLFHLAEGGQEGEAGGVNRQAAALGVEVLNFLRGRQIAAFLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSCRWLGWAGEGRGDDGGSGLPFGYYLDLDALGVARAAAQSGAQCSALFYAEAWIEGRFGEAAGITASRWRDQGEGSGGDGLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWENTLPAYDTLLQ 2641
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: UPI0015B2D5EE (serine-protein kinase ATM n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B2D5EE)

HSP 1 Score: 89.7 bits (221), Expect = 2.460e-14
Identity = 110/412 (26.70%), Postives = 151/412 (36.65%), Query Frame = 1 
Query: 1642 YYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVP-APAADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTCGRPWGPALGGGSLFGCAGSAAGGXXXXXXPGGGSGRTVFHEHVFQALGSLRQRNARVFESAIGNARALALARLRSGGGGQEGGKGLYPCLVQLQCVVEMEEMFSVLSGAGVDGGRGGHATDDAAEALMERWRARSAPVQEH-FESLEPALALR 2871
            ++L+L+ L VARAA  C A  +AL YAE  ++ +         S+ R        DG  ++ +       GL   GG   G           ++ LL+EV+ S+ EPDS+YG   A  A    +   Y HE  W   L  YD                                    SLP    Q G+  +LQ  GL   L  YLRGL    A  G       +LR +QF++AWR  +WD     L+DRS                                     PG       F+E VF AL +LR +    F   + N R   +  L       E    LYP L  LQ + E+E +  +              T+     ++ RWR  S  + +  F  LEP LALR
Sbjct: 1960 FWLELNYLEVARAAETCSAHFTALLYAEIHVDRRKSTLEDGRRSQSRTSRRILFEDGSQNFAI------TGLTENGGEDTGIS---------LQDLLIEVYRSIGEPDSLYGCAGAKMASPLTRIRTYEHEAQWGKALATYDLHT---------------------------------SLPDVTRQVGIVEALQNFGLCGTLVTYLRGLESEGADWGA------ELRELQFQAAWRNTQWD---CHLSDRSEKA---------------------------------DPG-------FNESVFYALQALRDKEFSAFSQTLRNTRVSEVEALCRDS--LEAVSSLYPALCDLQRISELESVGELCCSG---------LTELGVAEVLGRWRRHSELLADSDFGLLEPVLALR 2263
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A7S1FVN2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVN2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.970e-13
Identity = 176/748 (23.53%), Postives = 269/748 (35.96%), Query Frame = 1 
Query:  442 EAMPAAVHLEASRLAGEIG----AVDPYDVELAERASARGGGRWAGLGPDSSPSKNASSSLEDPLSGPKMQALRLMASYLTDRDEGLSSCALCTAKALLSREATNERLLKASSFEVQALLQPFTARLAQMNTVRTASRVWNGLFGSAHASSIGGXXXXXXXXE--------RVETAGLALSFEV-----------WTTSGKTFAQWVCRLTSALLLECYA--GVASESFRNASSKGGGEDPTFPPRPPGRRPVSGHALLFGSKPPLEGKDEMLALCYALCQRKPELAACLFPAIVYDLVRSHDGLENADEGDSSRGGTNR--------------AASELSAAFREHLFCVDGSL---GDG-SRVNPQAVALGIEVLNFLRGRQVSAF--LRHHRQGKRTHTGAGXXXXXXXXXSADGKDTPPSSRWLEWAGKGREK----DGGSGL---------PFGYYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDA-------AGLMSGGGGAEGRKEA-EGEEKR---EVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVY------------AHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQ---------FESAWRMCEWDPGLATLADRSSSHGVDTC 2415
            +A P ++ LEA+R+ G +     A+  +   L    +           P     ++ ++  EDPL   +   LR +A YL   +   +  AL TAKA+LS   T + L      EV+             N   T S + + + G  H  S+          +        R   AG     ++           W   G+ F +WVC L  A+LL CY       ++    +++G G D +F               +FG       K ++ A C ++  R+ + A  +FPA+V+DL+RS  G    +  D      NR              A   L+  F+ H+     S     DG   V+P+AVA+ +E L+FLR      F    +HR                        D PP+ R     GK ++K    D  +GL         PFG  L LD L +A+A A C    S+LFYA+ + + KF   AG    R+   G  N              DA       +G++SG G    R+   EG   R   E+  +L   +  L E D   GV         +  +             A  GG + ++    TL                            L +   S  G+     V   L  +GL HVL+ Y+         +G   D D    N++         FE +WRM +W+     +AD  S+  V  C
Sbjct:  332 DATPPSIGLEAARVLGRLSLDWTALSKFRTALGSPCN-----------PAFGREEDVAAKGEDPLLLFQQDLLRRLAQYLRSDNASTALIALNTAKAILS---TEDGLKVWRHLEVRE----------GDNEDPTKSLLESLVHGRRHKGSLPSYAHLAPPVDPCHIARLKRKSAAGRTCHNDMELEQWCWGEGLWNCEGEPFERWVCDLVCAILLCCYPLRHKKDKAHGAEANEGTGVDASF--------------CIFG-------KAQIFAHCASISSREQDFATAIFPALVFDLLRSDAGASKKNRVDDFLYAHNRKVCADTTIGAVSGHANQVLTERFKRHIIEPAASATARSDGRGEVSPKAVAMALETLDFLRRVTQQNFNDSSYHR------------CNVDALPDRTYPDQPPNRRRKSAGGKEKKKGEDVDYNAGLEDNPEWQGVPFGVVLGLDGLQIAKAFAYCKNFHSSLFYADMYGDTKFA-GAGALFERFEQGGRQN-------------HDAILRLDSRSGIVSGFGNLLPRRHCHEGPPARCLAELSGVLHASYRELGEADGARGVEHYGGGCGGEGGLLRDGEGKGHVRAMAGGGGTRGSVLGLQTLDMRR------------------------LQNAPASKEGR---EEVLRELDSLGLHHVLQRYI---------VGSTYDEDPSSENIKYIRACREKWFEESWRMFQWEDTKLDVADDPSTIHVQRC 972
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A5J4Y5R1_9CHLO (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5R1_9CHLO)

HSP 1 Score: 84.3 bits (207), Expect = 1.080e-12
Identity = 75/264 (28.41%), Postives = 107/264 (40.53%), Query Frame = 1 
Query: 1642 YYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPAPAADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTC-GRPWG 2430
            Y+LD+D L VA AA +C A  +AL Y E WIE ++G      A++                                            +   + LLL+++SS+ EPD IY V A    + +Q  +Y HE  W   L  YD L +                      +GG              Q G+  +LQ++G RH++E Y +G    PAS+   P  DG    M++ESAWRM +W         +S+S   DT  GRP G
Sbjct: 1681 YWLDVDYLLVAAAALRCSAYFTALLYVEHWIEDEYGRLTLTDATQDHKS---------------------------------------SRATADELLLDIYSSMNEPDGIYAV-ARGHSMVSQLKLYEHESSWDKALTGYDLLCRRAPPASTSLASPLAQPGPGTPVSGGSCAH---------WQQGLLTALQQLGCRHLIEAYWQGQ---PASVS--PG-DGRSGEMRYESAWRMGQW---------KSASDQSDTVPGRPVG 1880
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A7SIS1_NEMVE (Non-specific serine/threonine protein kinase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SIS1_NEMVE)

HSP 1 Score: 83.6 bits (205), Expect = 1.690e-12
Identity = 103/414 (24.88%), Postives = 160/414 (38.65%), Query Frame = 1 
Query: 1171 KDEMLALCYALCQRKPELAACLFPAIVYDLVRSHDGLENADEGDSSRGGTNRAASELSAAFREHLFCVDGSLGDGSRVNPQAVALGIEVLNFLRGRQVSAFLRHHRQGKRTHTGAGXXXXXXXXXSADGKDTPPSSRWLEWAGKGREKDGGSGLPFGYYLDLDELSVARAAAQCGAQCSALFYAEAW--IEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPAPA-ADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHG 2403
            KDEML L   +C+ K E A  + P +V++++      E A+E ++SR   +  + ++ A F  +         +       A +  + +   +R   +     H R   R                  G  TP       W                ++LDLD L  A+AA +C A  +AL Y E W  ++    E+        R Q                E D+A   + GG +              + LL++++SS+ E DS+YGV A   ADL ++   Y HE  W+  + AYD  +Q                     PT                Q G+  +L+  GL HV+++YLRG  + P SL   P++      +QFESAWR C WD   +  +D S   G
Sbjct:  461 KDEMLRLLAPVCKVKVEFAEQVLPFLVHNILEQ----EAANENEASR---DLLSGQVGALFVHYNEASSAPDPNNRATKGGAFSFCVPLTQSIR--TILKVTNHLRTQPRPKA------------RGQGSSTP-------WDNN-------------FWLDLDYLEAAKAAQKCTAHFTALMYTEIWCDVQRSLPENPMNITLPTRSQDI--------------EVDSASQSTDGGLS-----------TSYQSLLVDIYSSIAELDSVYGVGAGRLADLESRIRTYEHEELWEKAVGAYDLRMQES-------------------PTA---------------QIGMLKALKNFGLYHVMDNYLRG--IPPDSLRTSPEV----AELQFESAWRNCTWDIDTSLGSDVSRRPG 768
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: UPI00138FA7D4 (serine-protein kinase ATM n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA7D4)

HSP 1 Score: 83.6 bits (205), Expect = 1.880e-12
Identity = 78/266 (29.32%), Postives = 114/266 (42.86%), Query Frame = 1 
Query: 1621 GSGLPF--GYYLDLDELSVARAAAQCGAQCSALFYAEAW--IEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPAPA-ADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHG 2403
            GS  P+   ++LDLD L  A+AA +C A  +AL Y E W  ++    E+        R Q                E D+A   + GG +              + LL++++SS+ E DS+YGV A   ADL ++   Y HE  W+  + AYD  +Q                     PT                Q G+  +L+  GL HV+++YLRG  + P SL   P++      +QFESAWR C WD   +  +D S   G
Sbjct: 1959 GSSTPWDNNFWLDLDYLEAAKAAQKCTAHFTALMYTEIWCDVQRSLPENPMNITLPTRSQDI--------------EVDSASQSTDGGLS-----------TSYQSLLVDIYSSIAELDSVYGVGAGRLADLESRIRTYEHEELWEKAVGAYDLRMQES-------------------PTA---------------QIGMLKALKNFGLYHVMDNYLRG--IPPDSLRTSPEV----AELQFESAWRNCTWDIDTSLGSDVSRRPG 2159
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A3P4NLY3_GULGU (FAT domain-containing protein (Fragment) n=1 Tax=Gulo gulo TaxID=48420 RepID=A0A3P4NLY3_GULGU)

HSP 1 Score: 81.6 bits (200), Expect = 5.960e-12
Identity = 101/416 (24.28%), Postives = 154/416 (37.02%), Query Frame = 1 
Query: 1642 YYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPA-PAADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGL----RVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTCGRPWGPALGGGSLFGCAGSAAGGXXXXXXPGGGSGRTVFHEHVFQALGSLRQRNARVFESAIGNARALALARLRSGGGGQEGGKGLYPCLVQLQCVVEMEEMFSVLSGAGVDGGRGGHATDDAAEALMERWRARSAPVQEH-FESLEPALALR 2871
            ++LDL+ L VA+ A  C A  +AL YAE + + K  E     +  + +  +                 A   +S     E  KE  G     ++ LLLE++ S+ EPDS+YG           +   Y HE  W   L  YD                                    ++     Q G+       GL H+L  YL+GL    + G A          +L+ + +++AWR  +WD GLA       S G++      GP+                               +HE ++ AL SLR R    F  ++  AR   +  L  GG   E    LYP L +LQ + E+E +  + S +G         TD     +  +WR  S  +++  F   EP +ALR
Sbjct:  665 FWLDLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMEDQDRRSLTFEEASQST---------------AISSLS-----EKSKEETG---IRLQDLLLEIYRSIGEPDSLYGCGGGKVLQPLTRLRTYEHEAMWGKALVTYDLET---------------------------------AISSSARQAGIIQXXXXXGLCHILSVYLKGLDRENKEGCA----------ELQELHYQAAWRNMQWDHGLAV------SKGLE------GPS-------------------------------YHESLYNALQSLRDREFSTFYESLRYARVKEVEELCKGG--LESVYSLYPTLSRLQAIGELENIGELFSSSG---------TDRQPSEVYTKWRKHSQLLKDSDFSFQEPIMALR 960
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A6P8J0E7_ACTTE (Non-specific serine/threonine protein kinase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J0E7_ACTTE)

HSP 1 Score: 80.5 bits (197), Expect = 1.520e-11
Identity = 69/258 (26.74%), Postives = 104/258 (40.31%), Query Frame = 1 
Query: 1642 YYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESA---GITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPAPA-ADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHG 2403
            ++LDLD L VA AA +C A  +AL Y E W + +  +S     IT                +   +  E+ +    SG G                + LLL+++S++ EPDS+YG  A   AD+ ++   Y HE  W   L AYD  +Q                                        TG+  +L+  GL HV++ YL+GL       G       ++  +Q+ESAWR C WD  L + ++  S  G
Sbjct:  966 FWLDLDYLEVAHAAHKCSAHFTALLYTEIWSDIQKSQSETPLSITLP-------------TNSQDIQMEDHSHSTDSGVG-------------TNFQSLLLDIYSNIGEPDSVYGAGAGRLADIESRIRTYKHEKAWGKALGAYDLQVQES----------------------------------SSAHTGMLQALKNFGLYHVMQQYLKGLE------GEAVHSSNEIAELQYESAWRNCVWDVELESSSECCSIAG 1157
[Close]
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Match: A0A8C5LAH7_JACJA (Serine-protein kinase ATM n=4 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5LAH7_JACJA)

HSP 1 Score: 80.5 bits (197), Expect = 1.640e-11
Identity = 101/426 (23.71%), Postives = 163/426 (38.26%), Query Frame = 1 
Query: 1606 REKDGGSGLPF--GYYLDLDELSVARAAAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGLGPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGVPA-PAADLSAQATVYAHEGGWQNTLPAYDTLLQXXXXXXXXXXXXXXXXXXXAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPASLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTCGRPWGPALGGGSLFGCAGSAAGGXXXXXXPGGGSGRTVFHEHVFQALGSLRQRNARVFESAIGNARALALARLRSGGGGQEGGKGLYPCLVQLQCVVEMEEMFSVLSGAGVDGGRGGHATDDAAEALMERWRARSAPVQEH-FESLEPALALR 2871
            R+K   SG  F   ++LDL+ L VA+ A  C A  +AL YAE + + K  +     +  + ++ +G                    +S     E  KE  G     ++ LLLE++ S+ EPDS+YG           +   Y HE  W   L  YD                        + T     +R         Q G+  +LQ +GL H+L  YL+GL           +   +L+ + +++AWR  +WD G       S +HG++                                      T +HE ++ AL SL+ R    F  ++  AR   +  L  G    E    LYP L +LQ + E+E + ++ S +          TD     +  +W+ +S  +++  F   EP +ALR
Sbjct: 1920 RQKRPSSGTIFDDAFWLDLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSPAFEEESQGT---------------TISSLS-----EKSKEETG---ISLQDLLLEIYRSIGEPDSLYGCGGGKMLQPLTRIHTYEHEAMWGKALVTYD------------------------LETAICSSTR---------QAGIIQALQNLGLCHILSTYLKGLDHENN------EWCAELQELYYQAAWRNMQWDHGS------SVNHGLE-------------------------------------ETSYHESLYNALQSLKDREFSTFYESLKYARVKEVEELCKGS--LESVYSLYPALSRLQAIGELENIGALFSRS---------VTDRQLSEVYLKWQKQSQLLKDSDFSFQEPIMALR 2229
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8297.19381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNB7_ECTSI9.050e-23554.27Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5KI56_9PHAE1.520e-20059.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI0015B2D5EE2.460e-1426.70serine-protein kinase ATM n=1 Tax=Anguilla anguill... [more]
A0A7S1FVN2_9STRA2.970e-1323.53Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A5J4Y5R1_9CHLO1.080e-1228.41Non-specific serine/threonine protein kinase (Frag... [more]
A7SIS1_NEMVE1.690e-1224.88Non-specific serine/threonine protein kinase n=1 T... [more]
UPI00138FA7D41.880e-1229.32serine-protein kinase ATM n=1 Tax=Nematostella vec... [more]
A0A3P4NLY3_GULGU5.960e-1224.28FAT domain-containing protein (Fragment) n=1 Tax=G... [more]
A0A6P8J0E7_ACTTE1.520e-1126.74Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8C5LAH7_JACJA1.640e-1123.71Serine-protein kinase ATM n=4 Tax=Jaculus jaculus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8297contigM-pyrifera_M_contig8297:1103..11221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score739.6
Seed ortholog evalue1.9e-210
Seed eggNOG ortholog2880.D8LNB7
Preferred nameATM
KEGG koko:K04728
KEGG Pathwayko01524,ko03440,ko04064,ko04068,ko04110,ko04115,ko04210,ko04214,ko04218,ko05165,ko05166,ko05202,ko05206,map01524,map03440,map04064,map04068,map04110,map04115,map04210,map04214,map04218,map05165,map05166,map05202,map05206
KEGG ModuleM00295,M00691
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000280,GO:0000706,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000956,GO:0001541,GO:0001666,GO:0001756,GO:0001775,GO:0001894,GO:0001895,GO:0001932,GO:0001934,GO:0002200,GO:0002327,GO:0002329,GO:0002331,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0002562,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005819,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006464,GO:0006468,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006975,GO:0006977,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007095,GO:0007127,GO:0007131,GO:0007140,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007548,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008219,GO:0008285,GO:0008334,GO:0008340,GO:0008406,GO:0008585,GO:0008610,GO:0008630,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010165,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010389,GO:0010468,GO:0010506,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010948,GO:0010965,GO:0010972,GO:0012501,GO:0014070,GO:0014074,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016301,GO:0016303,GO:0016310,GO:0016444,GO:0016458,GO:0016569,GO:0016570,GO:0016572,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030071,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030183,GO:0030258,GO:0030330,GO:0030717,GO:0030888,GO:0030889,GO:0031000,GO:0031056,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031347,GO:0031348,GO:0031399,GO:0031401,GO:0031503,GO:0031570,GO:0031571,GO:0031572,GO:0031577,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032212,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032944,GO:0032945,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033127,GO:0033129,GO:0033151,GO:0033554,GO:0034350,GO:0034351,GO:0034397,GO:0034641,GO:0034645,GO:0034655,GO:0035004,GO:0035173,GO:0035264,GO:0035282,GO:0035556,GO:0035825,GO:0036092,GO:0036211,GO:0036270,GO:0036289,GO:0036293,GO:0040007,GO:0040029,GO:0042113,GO:0042127,GO:0042157,GO:0042159,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042770,GO:0042981,GO:0043009,GO:0043030,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043412,GO:0043516,GO:0043517,GO:0043523,GO:0043525,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044818,GO:0044819,GO:0044877,GO:0045017,GO:0045088,GO:0045132,GO:0045137,GO:0045141,GO:0045143,GO:0045321,GO:0045494,GO:0045786,GO:0045787,GO:0045814,GO:0045824,GO:0045839,GO:0045841,GO:0045892,GO:0045930,GO:0045934,GO:0045935,GO:0045937,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046545,GO:0046649,GO:0046660,GO:0046700,GO:0046777,GO:0046834,GO:0046854,GO:0046983,GO:0047485,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048599,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048871,GO:0050000,GO:0050670,GO:0050672,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050864,GO:0050865,GO:0050866,GO:0050869,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051276,GO:0051303,GO:0051321,GO:0051402,GO:0051409,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0052742,GO:0060249,GO:0060255,GO:0060322,GO:0060429,GO:0060548,GO:0061053,GO:0061458,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070482,GO:0070663,GO:0070664,GO:0070727,GO:0070997,GO:0071044,GO:0071156,GO:0071158,GO:0071173,GO:0071174,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071481,GO:0071500,GO:0071704,GO:0071840,GO:0072331,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072425,GO:0072431,GO:0072434,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090220,GO:0090304,GO:0090399,GO:0090407,GO:0097190,GO:0097193,GO:0097694,GO:0097695,GO:0098813,GO:0104004,GO:0140013,GO:0140096,GO:1900034,GO:1901214,GO:1901215,GO:1901216,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901796,GO:1901798,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902275,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902749,GO:1902750,GO:1902806,GO:1902807,GO:1903046,GO:1903047,GO:1903432,GO:1903506,GO:1903507,GO:1903624,GO:1903626,GO:1903978,GO:1904262,GO:1904353,GO:1904354,GO:1904356,GO:1904358,GO:1904882,GO:1904884,GO:1905269,GO:1905818,GO:1905819,GO:1905843,GO:1990164,GO:1990391,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000278,GO:2000573,GO:2000816,GO:2001020,GO:2001022,GO:2001141,GO:2001228,GO:2001251,GO:2001252
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0892@1,KOG0892@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03032,ko03400
Exons13
Model size2871
Cds size2841
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8297.19381.1prot_M-pyrifera_M_contig8297.19381.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8297 1103..11191 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816736.3168178-CDS-M-pyrifera_M_contig8297:1102..11891622816736.3168178-CDS-M-pyrifera_M_contig8297:1102..1189Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 1103..1189 -
1692278148.0634322-CDS-M-pyrifera_M_contig8297:1102..11891692278148.0634322-CDS-M-pyrifera_M_contig8297:1102..1189Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 1103..1189 -
1622816736.3314345-CDS-M-pyrifera_M_contig8297:1564..19751622816736.3314345-CDS-M-pyrifera_M_contig8297:1564..1975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 1565..1975 -
1692278148.0778685-CDS-M-pyrifera_M_contig8297:1564..19751692278148.0778685-CDS-M-pyrifera_M_contig8297:1564..1975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 1565..1975 -
1622816736.3450646-CDS-M-pyrifera_M_contig8297:2529..26821622816736.3450646-CDS-M-pyrifera_M_contig8297:2529..2682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 2530..2682 -
1692278148.0915627-CDS-M-pyrifera_M_contig8297:2529..26821692278148.0915627-CDS-M-pyrifera_M_contig8297:2529..2682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 2530..2682 -
1622816736.3609288-CDS-M-pyrifera_M_contig8297:3148..39071622816736.3609288-CDS-M-pyrifera_M_contig8297:3148..3907Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 3149..3907 -
1692278148.103365-CDS-M-pyrifera_M_contig8297:3148..39071692278148.103365-CDS-M-pyrifera_M_contig8297:3148..3907Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 3149..3907 -
1622816736.3726532-CDS-M-pyrifera_M_contig8297:4413..46291622816736.3726532-CDS-M-pyrifera_M_contig8297:4413..4629Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 4414..4629 -
1692278148.1154923-CDS-M-pyrifera_M_contig8297:4413..46291692278148.1154923-CDS-M-pyrifera_M_contig8297:4413..4629Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 4414..4629 -
1622816736.3829875-CDS-M-pyrifera_M_contig8297:6138..62371622816736.3829875-CDS-M-pyrifera_M_contig8297:6138..6237Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 6139..6237 -
1692278148.1291258-CDS-M-pyrifera_M_contig8297:6138..62371692278148.1291258-CDS-M-pyrifera_M_contig8297:6138..6237Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 6139..6237 -
1622816736.3952112-CDS-M-pyrifera_M_contig8297:6687..68631622816736.3952112-CDS-M-pyrifera_M_contig8297:6687..6863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 6688..6863 -
1692278148.1389332-CDS-M-pyrifera_M_contig8297:6687..68631692278148.1389332-CDS-M-pyrifera_M_contig8297:6687..6863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 6688..6863 -
1622816736.4123528-CDS-M-pyrifera_M_contig8297:7407..74581622816736.4123528-CDS-M-pyrifera_M_contig8297:7407..7458Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 7408..7458 -
1692278148.1486518-CDS-M-pyrifera_M_contig8297:7407..74581692278148.1486518-CDS-M-pyrifera_M_contig8297:7407..7458Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 7408..7458 -
1622816736.4263551-CDS-M-pyrifera_M_contig8297:7506..77271622816736.4263551-CDS-M-pyrifera_M_contig8297:7506..7727Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 7507..7727 -
1692278148.162192-CDS-M-pyrifera_M_contig8297:7506..77271692278148.162192-CDS-M-pyrifera_M_contig8297:7506..7727Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 7507..7727 -
1622816736.4406786-CDS-M-pyrifera_M_contig8297:8276..84171622816736.4406786-CDS-M-pyrifera_M_contig8297:8276..8417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 8277..8417 -
1692278148.1801414-CDS-M-pyrifera_M_contig8297:8276..84171692278148.1801414-CDS-M-pyrifera_M_contig8297:8276..8417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 8277..8417 -
1622816736.4548664-CDS-M-pyrifera_M_contig8297:9179..92441622816736.4548664-CDS-M-pyrifera_M_contig8297:9179..9244Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 9180..9244 -
1692278148.1923661-CDS-M-pyrifera_M_contig8297:9179..92441692278148.1923661-CDS-M-pyrifera_M_contig8297:9179..9244Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 9180..9244 -
1622816736.4692004-CDS-M-pyrifera_M_contig8297:10654..106971622816736.4692004-CDS-M-pyrifera_M_contig8297:10654..10697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 10655..10697 -
1692278148.207196-CDS-M-pyrifera_M_contig8297:10654..106971692278148.207196-CDS-M-pyrifera_M_contig8297:10654..10697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 10655..10697 -
1622816736.4819314-CDS-M-pyrifera_M_contig8297:10772..111911622816736.4819314-CDS-M-pyrifera_M_contig8297:10772..11191Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 10773..11191 -
1692278148.2189822-CDS-M-pyrifera_M_contig8297:10772..111911692278148.2189822-CDS-M-pyrifera_M_contig8297:10772..11191Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8297 10773..11191 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816736.4935927-UTR-M-pyrifera_M_contig8297:11191..112211622816736.4935927-UTR-M-pyrifera_M_contig8297:11191..11221Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8297 11192..11221 -
1692278148.2300756-UTR-M-pyrifera_M_contig8297:11191..112211692278148.2300756-UTR-M-pyrifera_M_contig8297:11191..11221Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8297 11192..11221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8297.19381.1

>prot_M-pyrifera_M_contig8297.19381.1 ID=prot_M-pyrifera_M_contig8297.19381.1|Name=mRNA_M-pyrifera_M_contig8297.19381.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=947bp
MTSYVCRLHPFPDGVASSTGLQVVSRAVASRQKAEADADAALASAVASSA
AARAATTEEAARDAGKAASAVEVWQAAERLVEGSVGEGASSSRSAGSLLA
SLSRLRGALRRCTKGGSVGGGGGGGGGGGGGGGGGAWEAMPAAVHLEASR
LAGEIGAVDPYDVELAERASARGGGRWAGLGPDSSPSKNASSSLEDPLSG
PKMQALRLMASYLTDRDEGLSSCALCTAKALLSREATNERLLKASSFEVQ
ALLQPFTARLAQMNTVRTASRVWNGLFGSAHASSIGGGGGSGGGGERVET
AGLALSFEVWTTSGKTFAQWVCRLTSALLLECYAGVASESFRNASSKGGG
EDPTFPPRPPGRRPVSGHALLFGSKPPLEGKDEMLALCYALCQRKPELAA
CLFPAIVYDLVRSHDGLENADEGDSSRGGTNRAASELSAAFREHLFCVDG
SLGDGSRVNPQAVALGIEVLNFLRGRQVSAFLRHHRQGKRTHTGAGGGGG
GGGGGSADGKDTPPSSRWLEWAGKGREKDGGSGLPFGYYLDLDELSVARA
AAQCGAQCSALFYAEAWIEGKFGESAGITASRWRDQGEGNGGDGLDDWGL
GPEEDAAGLMSGGGGAEGRKEAEGEEKREVERLLLEVFSSLPEPDSIYGV
PAPAADLSAQATVYAHEGGWQNTLPAYDTLLQQQQPPSSIGGLGGAMAAA
AAVPTGGLLVSRAGSLPGKGLQTGVAASLQRMGLRHVLEHYLRGLRVGPA
SLGGLPDLDGDLRNMQFESAWRMCEWDPGLATLADRSSSHGVDTCGRPWG
PALGGGSLFGCAGSAAGGGAAGEGPGGGSGRTVFHEHVFQALGSLRQRNA
RVFESAIGNARALALARLRSGGGGQEGGKGLYPCLVQLQCVVEMEEMFSV
LSGAGVDGGRGGHATDDAAEALMERWRARSAPVQEHFESLEPALALR
back to top

mRNA from alignment at M-pyrifera_M_contig8297:1103..11221-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8297.19381.1 ID=mRNA_M-pyrifera_M_contig8297.19381.1|Name=mRNA_M-pyrifera_M_contig8297.19381.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10119bp|location=Sequence derived from alignment at M-pyrifera_M_contig8297:1103..11221- (Macrocystis pyrifera P11B4 male)
AAGACGCTTATCGTGGACTCTCCTGCTTCCATGACTTCTTACGTCTGTCG
CCTGCACCCCTTCCCGGACGGAGTCGCGTCATCGACGGGTCTGCAAGTCG
TCTCGCGGGCCGTTGCGTCTAGGCAAAAGGCGGAGGCTGATGCCGACGCC
GCGCTAGCCTCCGCTGTCGCCTCTTCCGCCGCGGCTAGAGCCGCGACGAC
GGAGGAGGCTGCAAGGGACGCGGGCAAAGCGGCGAGCGCGGTCGAGGTTT
GGCAAGCCGCCGAGCGGTTGGTTGAGGGCAGCGTGGGAGAGGGGGCGTCC
TCTTCGCGGTCCGCCGGCTCTCTCCTTGCAAGCCTGTCTCGCCTGAGGGG
TGCGCTGCGCCGGTGCACCAAGGGTGGCAGCGTCGGCGGCGGTGGTGGTG
GTGGTGGTGGTGGTGGCGGCGGCGGCGGTGGCGGAGCTTGGGAGGCGATG
TCTGCGGGGCCGAAGGGCGTTGCGTTGGCCCGAGCGGCGGTCGGGGCCGT
GGTGCGCATTTGTCGGTCGGAGAGGCCGGCGGCGGTTCACTTGGAGGCTT
CGCGGTTGGCGGGAGAGGTAGGCGGGGGGCAGGGGGCGGGGGGGGGAGGC
GGGGGGGGGGCGTTTGAATTGCAGTGAGATTGATCGGAGCGGCATTCTGC
GCTCGTTGAACCCGTCGCCAAAGCTACGGTCGGGAGAGAGGCCGCCGGTC
CGGAAGCGGATGAAACGTGCGCCTGTTTCGTGTCCCTCTAGTTTTGCGTA
GCTGCAGGTGTTCCACGCCTCGGACACATGATGATCTGTAGATCATCTAG
CTCCTCACCTGCCGCGGTGAGAGGTTGTACAGGATCTGCCTTATAGGATC
TGCATAGTACAGATCCAAGCCAGGAAAGCATGTCCTTAGACCATTCGAAT
TGTAGCCTTGCCGCCCGGCAACAGCAGATAGTTCATACAGTATTGGGGGC
CCATGAAATCGAAATCGATGACCTGTCGGGGGTGTGAAAGTGGTCGGAGA
CTCTGCAGCCCTGACTTGGCGCCATGATCGACGCACGGACCTGGTTATTG
GCCGACACTACTCCCACGTGTCTCATCAACAGTGCCGCTTTTTTCAGGCG
CGTCCCGAAGGCGATGTTCGACCCTTTTTCTCTGCCCCCGAAGAAGCAAA
AGCACCCTCTTGTTACACGCGGCCTACGCATTTTGAAGGCTGACGGCACA
GACGCGAGAGGCCGGGCGTGATTATAGCCGTAGGCAATAGCAAGCTCACA
CGTAGGTGGCCAGTCAGCCGTTGTCGAGGAGGGAGACGTTTGCGCGCGCA
CCGGATCTTCCCTCTCCTGTTTCAGTTTTATTTGGTTTTGGTTTGCCTGG
TCGGTGAAAACCCGACATGCTCCGTCCCGGCATTGTAGGGATGCGAGGGT
CTATGGTCATANNNNNNNNNNCGACTACGGCCATGCATGAGATCGAGTAC
ATCTCTCCTATCGAGTACACCCCCCTCCCCCCGCTCCAACGATCGCTATC
CTAGGAGATAGGTGGTGGCCACAGATGGCGAAACAGAAAGATGATAAGAT
ACACTAAAAAAAGTGTCCGTGTAATATACGGAAAAACGCAATGAGCGCCC
ACATGTTGGATGTGTCTCCCTCAGGAGTAGGAATAGTGCTGCGTCTCGAA
AGGGGCGCGTGGTCAATGGCCATATGCCTCAGGCGTGCAACAAATGAGTA
CCCCCCCCCCCCTCCCCGCCCCCTCCCCCCCCCTCCAACTTTTCATCATC
GTCGCCACCAGTATCGCCATCGCAACATCACCTCCCCTTCCGTGTATCGT
GTCCCAACCCCACAATCGTTGCTCTCACACGCCCCCGTCCTTCCCTTGTC
TTCCCTTCCCCGTGTGCCGTGTTCGTATCGACTGGCGTCACCTATGTACG
CATGCCCACACGCCCTCGCTGTTTTCGTGCTCGGTTGCTGGGCGTTTACT
TTCGTGCCGCGATCGGCGACTCGCTAGATTGGCGCGGTGGACCCCTACGA
CGTGGAGCTCGCCGAGAGAGCCTCGGCCAGGGGTGGGGGTAGGTGAGGGT
GTTTCGAGTAGATAGGGACGTTGCTTGCAGAAGGACGGTATTCTTGAAGC
TTTCGTCCTGGCAGGGTTGCCTAGAGAGATTTTGGCAGGCATCGCGGAAG
GGCAGATGTCCTTGCCAGCCAACTGTTAATACTACCCGACTAAATCGTAC
CCAGCGTTGGTTTTATTTTAGCCTCCTTATGCTTCCTTGTTTTTTTTTTT
TTTTGACATGCTGCAGCTATAGTTGGTGTTCGGAGCGTTCTAGGGGAGGC
GTGCGACCGCAATTTGCTCGTGTCGTGCGTCGTTTTTTTTCCAACTGACC
GGTGTTCGGCAACTACAGTACATTGTACGCTCGACATCCTTCGGCGTGTC
TATATAGTGGTACATCGTGTATTACGTCAGCGGTTGCACCTGCTTGTCAA
AAGGCTATACGGGCCACGAGCCTTGTCATCATATCGATCGTCATTCACGC
TCTGCCCGAATACGTCTGTCTTGAAGTTTTTTCCATCGGAAAAAAATTGC
GTTGCCATCTCGACGACGAACATAATAGCTATCCCGTGCCCTATAGACAT
ACCTCCTCTACCTTCCGTACTCCCAAGTACATTGTTTTGTTTTTGTTTTT
TCTTTACGCGTCGATTGTTTTACTGATCTACCCTGAAAGCGTGCTCCCGA
TGTCAACCTACTTCCCTCCCCTCCCGGCCCCACCTCGATCCATCTATGTC
GGCGAAATCCGACCCGCTTGGTTGCTTTGCCGTGCGTTCTGACCACGCCA
ACAGATGGGCGGGCTTGGGGCCGGACTCATCTCCCAGCAAAAACGCCTCG
AGCAGCCTCGAAGACCCGCTGTCCGGGCCGAAGATGCAAGCCCTTCGCCT
GATGGCGAGCTACCTGACTGACCGCGACGAAGGCCTCTCGTCGTGGTGAG
TGTCCTCCGGGATGGACAGCAGCACATTCTCCGTCCAACCGCACATGATG
GTACAGCAGAGTGGGTCGCAGCATTAGAGGACCCAGCGGTACGGCGTATC
TGGTATGCCAGCATTCTCAAGCGATGTGCGTGAGCGAAGAAACCTTGGAC
ATAATACCTGGTTAGGTTGGTGCATCAGTCGGAGTTGCTCATAGCAGATC
AGTAATATTGCAGCGGTAGGTGGTGCATCAGCGCGGGCCGCAGCGGCAGG
TGGCGGGGAGCAGTTGTGCGTTCGGAGCAAACTACGCCGTGCTGCCGTGC
TGCGTTTCGACGGACCGCGGATGGTTCCAGATTCGATCCGCGCCGATCAC
GTCTACATTACACTTGGTCGAAAACGAAGATTATCATTGGAGGTACATTG
ACTACGGTAATTAGTGACAGAGACTTTTCGATTATGCGCGTCGACGATCA
CATATGTTGCGGTCGGAAATAACTGATTACCGATGGCCTCCCCCAATCCA
CCCCTTCCCACCCGTTCCGCCCACCGCCTCTCTCGAACACCCAGCGCGTT
GTGCACGGCCAAGGCTCTCCTCTCTCGAGAGGCCACGAACGAACGCCTCC
TCAAGGCCAGCTCTTTCGAAGTGCAGGCTCTCCTCCAGCCCTTCACGGCA
CGGTTGGCCCAGATGAACACCGTCCGCACTGCCTCGCGCGTGTGGAACGG
CCTGTTTGGGAGCGCTCATGCTAGCTCGATTGGCGGCGGCGGCGGCAGCG
GCGGCGGCGGCGAAAGTACAGGAGTTGCAGCAGAAGGAGGGGGTGCTGTG
GAGGACGGGGGAGGGGTGGAGACCGCAGGATTGGCGCTGTCGTTCGAGGT
CTGGACGACGTCGGGTGCGTGCGTTATTATATAGTTGAGCACGGCGGGTG
TCGGTTCGTGCCTCTCAACGTGTACCGTCGAGGGGTTCGTGGGGGGGGGG
GGCTGCAAGACTGTTCAGGGGGGTGTCAGCAGACAAAATTTGTGCTTGTG
TGTCTAGAGCAGTCTGGGGGTGCGCAGGTGCCGTACGAGCGGGGGCGGGA
AGTGGGGTAGGGTAGGAAGGGAGGTTTTATTTTTGGAGGCGTATTCCTGT
TTTCATGGCGAGTGTTCGGGCCCCCGAGTATCTACTAATATATCGTGTCA
CCACCGTTTCTCCCGTTTTCCGCTGCTGTAGTTGGGGTGGAACACTGTTG
GGAGTGCGTCCGTACGGCTACGCCCACGCCTCGGGTGACTTGTGGCCACC
AAGACGGACGGACGCCAGGGTGGTTCCCGCCAAATTTCCCGCACCAGGAC
ACCCCCCCCCGCCCCCCCGCCCCCACGCAACGCCAACCTATCTTTTTTTT
TCGGCCTCCCCCCTCTGCGGTGAAAATGATTTCTTCGGGCGTTTCCACCG
ATCTCCAGGAAAAACATTCGCTCAATGGGTCTGCCGGCTCACTTCGGCCC
TCCTGTTGGAATGCTATGCGGGGGTGGCGTCTGAGAGCTTCAGGAACGCC
TCTTCTAAGGGCGGAGGCGAGGACCCAACTTTCCCCCCGCGCCCGCCGGG
GAGGCGGCCGGTCAGTGGTCACGCCTTGTTGTTTGTGTGTTATCTCGCGA
GGAGCGAACTACAAGTAGTATGCACCGCGTACTTGATGTTTTGTTTGCTA
TGGTCCACGCAGGCACGGAAATTGTGTAGTTATCCGTCTTTTCTTTAGCA
GATCACGAAAACTTGTATATTGAAAATGCTTTCGGGGGCTCGGATGGCCG
CGAATGAACTGTGAGTGGTAGGTAGGAGATGTGATAACCCCCTCCTCTGC
GCTCCCGCTCCCTCCTCGAGAAAAATCGAGAACGATCGGAGCTATCTTGT
CGGGCACCCGGCCCAGGTTTTACTCACCGCACACTTCTGTTCTCCGTTGG
AAGAGAGGACGCGCCTACTCTTGATGATTCATCCCCGCCTGCGCAAAGTC
GCGCGTTGGTAACATTTTGTCGCGCGGCTGAGTCTTTTGGTCTGGCCGTT
ACTTTTGATTCGTCGATGCTGCTGATTGGCGTAGGGGTCGAAGCCGCCGC
TTGAAGGGAAAGACGAGATGTTGGCGCTGTGCTACGCGCTATGCCAGCGA
AAGCCCGAGCTGGCTGCATGCCTGTTCCCGGCGGTGAGTGAAACGGCTGT
TCGACCTCTGTCATTTTGTTGTTGTTGTTGTTGTTGTTGTTGATGATGAT
GATTGTTGTTGTTGTTTTTTCGGTTTTCGCTGGGTCTAGCCGGTTCGGTA
CCGCGCAGGTGCAGCACGGCCCCGAATCTGAAGTACGAGAGGGGGAGAGC
TGAAGGAGTAGGGCGACGATATTAGAAAGGATTACGATAATATATCAAAA
GCTGCAGTATTTATAGCACGATATGCGACGTTTTGCAGCGGGTTGCGTGC
ACAAGGAGGGGGGAGCGCCGGCGGAGTGAGAGGTAGGGCAAGAGCAAGCG
GGGAGCCCGACGGAGCATACTTAGAGGATTGACGGTCAAAGCGTGCTTAG
CACTGTGAGCGTGACTTTCACCCTTGCAGCCGTCCCTTGCGAACGGCCCC
TTGCCCCAATTATTGAAGTCTCTCGAAAGGTGAGGATACATACGCTAGCA
AGCATGGCGTCCCTATTATGCGCGATGCTAAACCTGGTAAGGTGTTATTA
TGACTGGAGTGACAGTTCTCTGAATTGGTACGTTTTAAAAAAAAAATGTT
TTAGATGAATAGTCCGGACGCACACCTCAATAGCACACATCACTACTTGC
TTGGGACGAGCCCCGAACGCATGCCTTTTCTTTTGCTCAGAAATATCGAC
GGCGCAAGTCTCTGTACACCTCTGTTTGGGCCTCTGGATCTCATCCACTG
ATAGTCCTTCTTCCTTTTCTCTTGCGATGACTACTGTGATGGTGTATTAA
GACGTTCTATCACGGGGGTCCATAGTATGTAGGACCAAATATTGTAAGTA
ATAATGGGTAAATATATAGGTTTTTATGTATGCCGTAGGTTTTATTAACT
ATGGACCCCCGTAATAACTATCTCACAACGAAATGTTTGAGTGCTTCTTT
CCCCCCCCCACTCCTTTCTCTCCCCCCCCCCCCGCACCTATGATATATAC
GTGATATATATGCAGATTGGGTTGGCGTCGGTTGGCGATGACGCTGTAAA
GCACGCCTCTCACTGCGTGAGCTAGACAGCCAGGGTACCGTTTTTTTTTG
TTTTGGCGGTTACCACGGCTGGAGGTCGAGTTAGATCATTCTTGTGCGGG
AAGAACCTTTACTCCGCACGAGGGGGATGCTCATATCACATAGTGTGCAT
ATCGGTGAGGCACCCACGAGGCAGTTACATAGTAAACCTATTGCTATCTC
TGGAACTGGCCACGCCGGAAATTAAAGCAATTCATTGATGCTGTCATCCA
TATGCAGGAAAATCCGCCTCTAAAAGCGGTTCTCAGTAGGATGCAGCTCA
CCCTTCATGCGACTCGCCCAACACCTGACGACTCTTCGCGCTTGGTGCAG
ACAATATTTCCCTGGTCGGTGAAAACCCGATGTGCCCCGTCCCGGCATTG
TAAGGATGCGAAGGTCTATGGTCATACGACTACGGCCGTGCATGATAATG
AGTACCCCCCCCCCCCTCTCCCCTCCTTCATTTGCTCGCTAGATCGTCTA
CGACTTGGTGAGATCCCACGACGGCCTCGAGAACGCAGACGAGGGCGACA
GCAGCAGAGGCGGGACCAACCGGGCAGCGTCTGAACTATCAGCGGCGTTC
CGCGAGCACCTTTTTTGCGTGGACGGGTCACTGGGGGATGGGTCGCGGGT
AAATCCGCAGGCCGTCGCGCTTGGCATCGAAGTGCTTAACTTTTTGCGGG
GACGCCAGGTGACGGGAGGGTTGGAGACGATGGGGGGAGAGGGGTCGTCG
GGAATCGGACAGAGATCGTAAGCATGGACACTCTTGCACTTGCACGCTTC
ATCGAGTTATTCCTGCCGATTGATGCTAGGTATGAAATGCGTCAAGCAAG
CGAGGCTGTTGTGTGAGCTGGGTTTTTGTTCATACAAAAGTTGCATGACA
TATTCGTACATTGCAAGTTCACCCGCGCCCTCTGTTTGTGGTGCGGAAGA
CGGTTTTTCTTGCCATGTTGTGCAGGGGTGGGGGGTGGAGTGGACGGTCA
CTCGTGGTGACGTGTGCGTCGGCGTAGGCGCTACCTACACCGGTGGCCGG
CTGACAGGGCGGGAAGCTGCGTATTGCGGTGGCAGCAGCAGCAGCAGCAG
CAGCAGCGGCTTCTTAACCGCCGTACTGCGCCTCATGTATGTTTCTCCCC
CTCCTCACTCTCGCTACGGGCACCGTTCCCTCTCCCTTTTCCTATCGCCT
CCGCCGTCGGTCAGGTTTCCGCTTTTCTTCGCCACCACCGACAAGGGAAG
CGAACCCACACGGGGGCGGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCAG
TGCCGACGGCAAAGACACCCCGCCCAGCTCTCGGTGGCTCGAGTGGGCCG
GTAAAGGGCGGGAGAAAGACGGCGGGAGCGGCTTGCCGTTCGGCTACTAC
CTGGACCTGGATGAGCTGAGCGTCGCCCGCGCCGCGGCGCAGTGCGGCGC
GCAGTGCTCCGCGCTGTTCTACGCCGAGGCCTGGATAGAAGGGAAGTTTG
GAGAGTCTGCCGGGATTACCGCCTCGAGGTGGAGAGACCAGGGTGAGGGT
AACGGTGGTGATGGGCTAGACGACTGGGGTTTGGGACCCGAGGAAGATGC
GGCCGGATTGATGAGCGGCGGCGGGGGAGCAGAGGGGCGGAAGGAGGCGG
AAGGGGAGGAGAAGCGGGAGGTAGAGCGGCTGTTGCTCGAGGTATTCTCC
AGCTTGCCCGAGCCCGACAGCATATATGGCGTGCCGGCGCCAGCGGCGGA
CCTGTCGGCGCAAGCAACGGTGTACGCTCACGAGGGGGGCTGGCAGAACA
CCCTCCCGGCATACGACACGCTCTTGCAGCAGCAGCAGCCGCCGTCGTCG
ATTGGCGGACTCGGCGGGGCAATGGCGGCGGCAGCAGCGGTGCCAACCGG
TGGTCTTCTTGTCAGCCGCGCTGGGTCGTTGCCAGGCAAAGGTCTGCAGA
CCGGTGTCGCGGCGTCTCTTCAGGTAGGTTTGTTTTTGTACGCATACTCG
TATATTTTGAGATTTGACCTGTCGTACCTGTATGACTTGTTGCGCTTTTT
CCTTCGAAACGAGTTTTTTTCCCGACGTCGGAGAGTGAAAGTGGGGAAAT
CACGTATTTTGCAGCGCGCGGTCAGCCTTCCGTCACGGTTGGGGCGTACC
ACACGCGTTCGCGTGATACGTCTTTTTGGCGCTGCGATCGCCTCGCGCTT
ATTACCGCGTCAATGACAGCGGTTGCCACCGCGCTCATTTGCCGCCGATG
ATACTCAAGCACCCGGCAGTGGACCACACTTTGGCGGCATGCACCGTCGG
TGCGCCAGTGACTCTTGCGGCCTGACTCCACCCGACACCGGCCCGAGATA
CCGGCCCGAACCCGAACCCGAACCTGAAGAACGAAAACCCGAACCTAATC
CCAGCCCGAACCCGAATCGCCCGCGCCCTCCTTTCGAAGCGTATGGGCCT
ACGCCACGTTCTGGAGCACTACTTGCGGGGGCTGCGCGTGGGGCCTGCGT
CACTTGGCGGCTTGCCCGACCTGGACGGCGACCTGCGCAACATGCAGTTC
GAGTCGGCGTGGAGGATGTGCGAGTGGGACCCAGGGCTTGCGGTGCGTCG
TTTGCGGTTGCTTGGTCGCGGCGCGTGGTGTCGTGCTGGTGTTTGGGGTA
AACTTGCTGCGGTCGTTAATTGGTGTGGTTGTTGATCTCGCGTGTCTGAA
GTGCACCAGGACAGACAGAGCATGTCGATGTTTCGTTTGCTTGCTTGTTT
TTTTTGTCAGAAACGTTTTTTTTTCACGTTTTATGTGGCCGCGGCTGGTA
GCGTCCTCCCTGTGCCGCCACCATGTCCGCAAGGACGTCTAGCCGTGAAC
TGTGGGTGGAGGCCCTTCTTCGTCGAGGGAGCAGGTCTGGTGATGTCACC
GCAGGTGGTGTGTGCGTGCGTTCCAAGTATTTTGTCTTGAAAGTCACTCA
TTCGGCCGCGGTGTTAGGGCGGAAGTTGCTTCGTTTTTTGTTTGTGTGTT
TGTTCTTCTTACGGAAGTTCCCGAGATGGCCCTGTCGTACGTCCAAACAA
CGCGTACCTAGCGCCTCGGCCACCACGTCTTGCTCTTGCTTCCCCCCCAA
ACATCTTTCCGGCGCGTCTCGGGGGGCCCGACACACCATGTTTCAGACGC
TCGCCGACCGCTCGAGCAGCCACGGCGTCGACACCTGCGGGAGACCTTGG
GGACCCGCTCTTGGAGGCGGCTCCCTTTTCGGCTGCGCTGGGAGCGCAGC
AGGTGGTGGCGCCGCAGGCGAGGGCCCTGGGGGCGGCAGCGGGCGCACCG
TGTTCCACGAGCACGTGTTCCAGGCCCTCGGGTCCCTGCGGCAGCGGAAC
GCGCGGGTGTTCGAGTCGGCGATAGGGAACGCGCGCGCTCTGGCTCTGGC
GCGGCTGAGGTCCGGCGGGGGCGGCCAGGAAGGGGGGAAGGGGCTGTATC
CCTGTTTGGTTCAGCTCCAGTGCGTCGTGGAGATGGAGGAGATGTTTTCG
GTGTTGTCCGGAGCCGGGGTCGATGGGGGCCGAGGGGGGCACGCGACCGA
TGATGCGGTGAGTCGTGCGGCCGGTTGGTGGGTGAGTAGGGTGCGTGGGG
GAGTGGGTGGATGGGTGGTGTGGCGTGTTGTGCTCGCAGTGTCTGGTGCA
TGCTTGGGGTGGACGAATCATGCGACACAGGCAGAGCGATGCTTGGGGTC
GTCCGTTGCGCCTCTCGTCTGTTGAGCCCATGTTTGTTGCGGTGCGGGTC
TGCCGATTGCGAGAGCAGGCGGCAGCGGGACTCCTGGTTTGTGCCGCTTG
ACGTGCCGAGAAGCCGCCGCCGACTCCTGCAGACTTTGAGGTTTGCCGGC
TTCCTGTCCCCCCCCGCCCTCACCCTCGCCCTCTCCCTTGTTTTGCACGC
TAAAAACGGCCGATGGGCTCGGCTACTGTAAGGCGGAGGCTTTGATGGAG
AGATGGCGCGCGCGGTCGGCGCCCGTGCAGGAGCATTTCGAGTCCCTGGA
GCCCGCGCTTGCTCTCAGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8297:1103..11221-

>mRNA_M-pyrifera_M_contig8297.19381.1 ID=mRNA_M-pyrifera_M_contig8297.19381.1|Name=mRNA_M-pyrifera_M_contig8297.19381.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5682bp|location=Sequence derived from alignment at M-pyrifera_M_contig8297:1103..11221- (Macrocystis pyrifera P11B4 male)
ATGACTTCTTACGTCTGTCGCCTGCACCCCTTCCCGGACGGAGTCGCGTC
ATCGACGGGTCTGCAAGTCGTCTCGCGGGCCGTTGCGTCTAGGCAAAAGG
CGGAGGCTGATGCCGACGCCGCGCTAGCCTCCGCTGTCGCCTCTTCCGCC
GCGGCTAGAGCCGCGACGACGGAGGAGGCTGCAAGGGACGCGGGCAAAGC
GGCGAGCGCGGTCGAGGTTTGGCAAGCCGCCGAGCGGTTGGTTGAGGGCA
GCGTGGGAGAGGGGGCGTCCTCTTCGCGGTCCGCCGGCTCTCTCCTTGCA
AGCCTGTCTCGCCTGAGGGGTGCGCTGCGCCGGTGCACCAAGGGTGGCAG
CGTCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGCGGTG
GCGGAGCTTGGGAGGCGATATGACTTCTTACGTCTGTCGCCTGCACCCCT
TCCCGGACGGAGTCGCGTCATCGACGGGTCTGCAAGTCGTCTCGCGGGCC
GTTGCGTCTAGGCAAAAGGCGGAGGCTGATGCCGACGCCGCGCTAGCCTC
CGCTGTCGCCTCTTCCGCCGCGGCTAGAGCCGCGACGACGGAGGAGGCTG
CAAGGGACGCGGGCAAAGCGGCGAGCGCGGTCGAGGTTTGGCAAGCCGCC
GAGCGGTTGGTTGAGGGCAGCGTGGGAGAGGGGGCGTCCTCTTCGCGGTC
CGCCGGCTCTCTCCTTGCAAGCCTGTCTCGCCTGAGGGGTGCGCTGCGCC
GGTGCACCAAGGGTGGCAGCGTCGGCGGCGGTGGTGGTGGTGGTGGTGGT
GGTGGCGGCGGCGGCGGTGGCGGAGCTTGGGAGGCGATGCCGGCGGCGGT
TCACTTGGAGGCTTCGCGGTTGGCGGGAGAGGCCGGCGGCGGTTCACTTG
GAGGCTTCGCGGTTGGCGGGAGAGATTGGCGCGGTGGACCCCTACGACGT
GGAGCTCGCCGAGAGAGCCTCGGCCAGGGGTGGGGGTAGATTGGCGCGGT
GGACCCCTACGACGTGGAGCTCGCCGAGAGAGCCTCGGCCAGGGGTGGGG
GTAGATGGGCGGGCTTGGGGCCGGACTCATCTCCCAGCAAAAACGCCTCG
AGCAGCCTCGAAGACCCGCTGTCCGGGCCGAAGATGCAAGCCCTTCGCCT
GATGGCGAGCTACCTGACTGACCGCGACGAAGGCCTCTCGTCGTGATGGG
CGGGCTTGGGGCCGGACTCATCTCCCAGCAAAAACGCCTCGAGCAGCCTC
GAAGACCCGCTGTCCGGGCCGAAGATGCAAGCCCTTCGCCTGATGGCGAG
CTACCTGACTGACCGCGACGAAGGCCTCTCGTCGTGCGCGTTGTGCACGG
CCAAGGCTCTCCTCTCTCGAGAGGCCACGAACGAACGCCTCCTCAAGGCC
AGCTCTTTCGAAGTGCAGGCTCTCCTCCAGCCCTTCACGGCACGGTTGGC
CCAGATGAACACCGTCCGCACTGCCTCGCGCGTGTGGAACGGCCTGTTTG
GGAGCGCTCATGCTAGCTCGATTGGCGGCGGCGGCGGCAGCGGCGGCGGC
GGCGAAACGCGTTGTGCACGGCCAAGGCTCTCCTCTCTCGAGAGGCCACG
AACGAACGCCTCCTCAAGGCCAGCTCTTTCGAAGTGCAGGCTCTCCTCCA
GCCCTTCACGGCACGGTTGGCCCAGATGAACACCGTCCGCACTGCCTCGC
GCGTGTGGAACGGCCTGTTTGGGAGCGCTCATGCTAGCTCGATTGGCGGC
GGCGGCGGCAGCGGCGGCGGCGGCGAAAGGGTGGAGACCGCAGGATTGGC
GCTGTCGTTCGAGGTCTGGACGACGTCGGGGGTGGAGACCGCAGGATTGG
CGCTGTCGTTCGAGGTCTGGACGACGTCGGGAAAAACATTCGCTCAATGG
GTCTGCCGGCTCACTTCGGCCCTCCTGTTGGAATGCTATGCGGGGGTGGC
GTCTGAGAGCTTCAGGAACGCCTCTTCTAAGGGCGGAGGCGAGGACCCAA
CTTTCCCCCCGCGCCCGCCGGGGAGGCGGCCGGTCAGTGGTCACGCCTTG
TTGTTTGAAAAACATTCGCTCAATGGGTCTGCCGGCTCACTTCGGCCCTC
CTGTTGGAATGCTATGCGGGGGTGGCGTCTGAGAGCTTCAGGAACGCCTC
TTCTAAGGGCGGAGGCGAGGACCCAACTTTCCCCCCGCGCCCGCCGGGGA
GGCGGCCGGTCAGTGGTCACGCCTTGTTGTTTGGGTCGAAGCCGCCGCTT
GAAGGGAAAGACGAGATGTTGGCGCTGTGCTACGCGCTATGCCAGCGAAA
GCCCGAGCTGGCTGCATGCCTGTTCCCGGCGGGGTCGAAGCCGCCGCTTG
AAGGGAAAGACGAGATGTTGGCGCTGTGCTACGCGCTATGCCAGCGAAAG
CCCGAGCTGGCTGCATGCCTGTTCCCGGCGATCGTCTACGACTTGGTGAG
ATCCCACGACGGCCTCGAGAACGCAGACGAGGGCGACAGCAGCAGAGGCG
GGACCAACCGGGCAGCGTCTGAACTATCAGCGGCGTTCCGCGAGCACCTT
TTTTGCGTGGACGGGTCACTGGGGGATGGGTCGCGGGTAAATCCGCAGGC
CGTCGCGCTTGGCATCGAAGTGCTTAACTTTTTGCGGGGACGCCAGATCG
TCTACGACTTGGTGAGATCCCACGACGGCCTCGAGAACGCAGACGAGGGC
GACAGCAGCAGAGGCGGGACCAACCGGGCAGCGTCTGAACTATCAGCGGC
GTTCCGCGAGCACCTTTTTTGCGTGGACGGGTCACTGGGGGATGGGTCGC
GGGTAAATCCGCAGGCCGTCGCGCTTGGCATCGAAGTGCTTAACTTTTTG
CGGGGACGCCAGGTTTCCGCTTTTCTTCGCCACCACCGACAAGGGAAGCG
AACCCACACGGGGGCGGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCAGTG
CCGACGGCAAAGACACCCCGCCCAGCTCTCGGTGGCTCGAGTGGGCCGGT
AAAGGGCGGGAGAAAGACGGCGGGAGCGGCTTGCCGTTCGGCTACTACCT
GGACCTGGATGAGCTGAGCGTCGCCCGCGCCGCGGCGCAGTGCGGCGCGC
AGTGCTCCGCGCTGTTCTACGCCGAGGCCTGGATAGAAGGGAAGTTTGGA
GAGTCTGCCGGGATTACCGCCTCGAGGTGGAGAGACCAGGGTGAGGGTAA
CGGTGGTGATGGGCTAGACGACTGGGGTTTGGGACCCGAGGAAGATGCGG
CCGGATTGATGAGCGGCGGCGGGGGAGCAGAGGGGCGGAAGGAGGCGGAA
GGGGAGGAGAAGCGGGAGGTAGAGCGGCTGTTGCTCGAGGTATTCTCCAG
CTTGCCCGAGCCCGACAGCATATATGGCGTGCCGGCGCCAGCGGCGGACC
TGTCGGCGCAAGCAACGGTGTACGCTCACGAGGGGGGCTGGCAGAACACC
CTCCCGGCATACGACACGCTCTTGCAGCAGCAGCAGCCGCCGTCGTCGAT
TGGCGGACTCGGCGGGGCAATGGCGGCGGCAGCAGCGGTGCCAACCGGTG
GTCTTCTTGTCAGCCGCGCTGGGTCGTTGCCAGGCAAAGGTCTGCAGACC
GGTGTCGCGGCGTCTCTTCAGGTTTCCGCTTTTCTTCGCCACCACCGACA
AGGGAAGCGAACCCACACGGGGGCGGGCGGTGGCGGTGGCGGTGGCGGTG
GCGGCAGTGCCGACGGCAAAGACACCCCGCCCAGCTCTCGGTGGCTCGAG
TGGGCCGGTAAAGGGCGGGAGAAAGACGGCGGGAGCGGCTTGCCGTTCGG
CTACTACCTGGACCTGGATGAGCTGAGCGTCGCCCGCGCCGCGGCGCAGT
GCGGCGCGCAGTGCTCCGCGCTGTTCTACGCCGAGGCCTGGATAGAAGGG
AAGTTTGGAGAGTCTGCCGGGATTACCGCCTCGAGGTGGAGAGACCAGGG
TGAGGGTAACGGTGGTGATGGGCTAGACGACTGGGGTTTGGGACCCGAGG
AAGATGCGGCCGGATTGATGAGCGGCGGCGGGGGAGCAGAGGGGCGGAAG
GAGGCGGAAGGGGAGGAGAAGCGGGAGGTAGAGCGGCTGTTGCTCGAGGT
ATTCTCCAGCTTGCCCGAGCCCGACAGCATATATGGCGTGCCGGCGCCAG
CGGCGGACCTGTCGGCGCAAGCAACGGTGTACGCTCACGAGGGGGGCTGG
CAGAACACCCTCCCGGCATACGACACGCTCTTGCAGCAGCAGCAGCCGCC
GTCGTCGATTGGCGGACTCGGCGGGGCAATGGCGGCGGCAGCAGCGGTGC
CAACCGGTGGTCTTCTTGTCAGCCGCGCTGGGTCGTTGCCAGGCAAAGGT
CTGCAGACCGGTGTCGCGGCGTCTCTTCAGCGTATGGGCCTACGCCACGT
TCTGGAGCACTACTTGCGGGGGCTGCGCGTGGGGCCTGCGTCACTTGGCG
GCTTGCCCGACCTGGACGGCGACCTGCGCAACATGCAGTTCGAGTCGGCG
TGGAGGATGTGCGAGTGGGACCCAGGGCTTGCGCGTATGGGCCTACGCCA
CGTTCTGGAGCACTACTTGCGGGGGCTGCGCGTGGGGCCTGCGTCACTTG
GCGGCTTGCCCGACCTGGACGGCGACCTGCGCAACATGCAGTTCGAGTCG
GCGTGGAGGATGTGCGAGTGGGACCCAGGGCTTGCGACGCTCGCCGACCG
CTCGAGCAGCCACGGCGTCGACACCTGCGGGAGACCTTGGGGACCCGCTC
TTGGAGGCGGCTCCCTTTTCGGCTGCGCTGGGAGCGCAGCAGGTGGTGGC
GCCGCAGGCGAGGGCCCTGGGGGCGGCAGCGGGCGCACCGTGTTCCACGA
GCACGTGTTCCAGGCCCTCGGGTCCCTGCGGCAGCGGAACGCGCGGGTGT
TCGAGTCGGCGATAGGGAACGCGCGCGCTCTGGCTCTGGCGCGGCTGAGG
TCCGGCGGGGGCGGCCAGGAAGGGGGGAAGGGGCTGTATCCCTGTTTGGT
TCAGCTCCAGTGCGTCGTGGAGATGGAGGAGATGTTTTCGGTGTTGTCCG
GAGCCGGGGTCGATGGGGGCCGAGGGGGGCACGCGACCGATGATGCGACG
CTCGCCGACCGCTCGAGCAGCCACGGCGTCGACACCTGCGGGAGACCTTG
GGGACCCGCTCTTGGAGGCGGCTCCCTTTTCGGCTGCGCTGGGAGCGCAG
CAGGTGGTGGCGCCGCAGGCGAGGGCCCTGGGGGCGGCAGCGGGCGCACC
GTGTTCCACGAGCACGTGTTCCAGGCCCTCGGGTCCCTGCGGCAGCGGAA
CGCGCGGGTGTTCGAGTCGGCGATAGGGAACGCGCGCGCTCTGGCTCTGG
CGCGGCTGAGGTCCGGCGGGGGCGGCCAGGAAGGGGGGAAGGGGCTGTAT
CCCTGTTTGGTTCAGCTCCAGTGCGTCGTGGAGATGGAGGAGATGTTTTC
GGTGTTGTCCGGAGCCGGGGTCGATGGGGGCCGAGGGGGGCACGCGACCG
ATGATGCGGCGGAGGCTTTGATGGAGAGATGGCGCGCGCGGTCGGCGCCC
GTGCAGGAGCATTTCGAGTCCCTGGAGCCCGCGCTTGCTCTCAGGGCGGA
GGCTTTGATGGAGAGATGGCGCGCGCGGTCGGCGCCCGTGCAGGAGCATT
TCGAGTCCCTGGAGCCCGCGCTTGCTCTCAGG
back to top