prot_M-pyrifera_M_contig82932.19376.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82932.19376.1
Unique Nameprot_M-pyrifera_M_contig82932.19376.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
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BLAST of mRNA_M-pyrifera_M_contig82932.19376.1 vs. uniprot
Match: A0A2E8D5B2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D5B2_9PLAN)

HSP 1 Score: 61.2 bits (147), Expect = 6.810e-10
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    1 DELAEIAKHEGWVTSMAFSPDGATLATAGGSSLLYRPG 38
            D+  +IAKHE WVTS+A+SPDGA LATAGG SL YRPG
Sbjct:   29 DQADKIAKHERWVTSLAYSPDGAMLATAGGQSLQYRPG 66
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BLAST of mRNA_M-pyrifera_M_contig82932.19376.1 vs. uniprot
Match: A0A3A0DSR5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DSR5_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 2.600e-7
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    6 IAKHEGWVTSMAFSPDGATLATAGGSSLLYRPG 38
            IA H  WVT++AF+PDGATL T GG SLLYRPG
Sbjct:   40 IATHARWVTAVAFTPDGATLVTTGGESLLYRPG 72
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82932.19376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E8D5B2_9PLAN6.810e-1073.68Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3A0DSR5_9BACT2.600e-772.73Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..36
e-value: 2.7E-7
score: 31.4
IPR011041Soluble quinoprotein glucose/sorbosone dehydrogenaseSUPERFAMILY50952Soluble quinoprotein glucose dehydrogenasecoord: 5..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82932contigM-pyrifera_M_contig82932:790..903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82932.19376.1mRNA_M-pyrifera_M_contig82932.19376.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82932 790..903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82932.19376.1 ID=prot_M-pyrifera_M_contig82932.19376.1|Name=mRNA_M-pyrifera_M_contig82932.19376.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
DELAEIAKHEGWVTSMAFSPDGATLATAGGSSLLYRPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011041Quinoprot_gluc/sorb_DH