mRNA_M-pyrifera_M_contig82865.19361.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A2E2N4Q1_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N4Q1_9BACT) HSP 1 Score: 251 bits (642), Expect = 3.440e-75 Identity = 130/261 (49.81%), Postives = 175/261 (67.05%), Query Frame = 1 Query: 10 RSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVTINSSMTELKEISADWPDDQRAL-VAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTE 789 +S +L+ ++P++ N ++G +HHALSMHRGYMILGL+ LADERLEAW IN + EL E+SA W D++ +A+L + LK FR QD+IAAV+HTP+D PA +FF A P ++ ++D ++ EE DLEA+ RK+L+ER+ AKGH LK SAA + +L G E C T+C ASVDRL L T +Q NF++YL R +FLA+ EA+ IR D W VS+DICLN VTPLA +A+N+AG I RQ E Sbjct: 33 KSDAILDVAIPSVENAQQVQGELHHALSMHRGYMILGLQALADERLEAWEEINKNEAELVELSAYWDDEESIKSLAKLKETLKLFREQQDRIAAVAHTPQDMPATTLFFVDAEPYGDRMLESIDAVLEEERDLEATAERKLLVERLAAAKGHFLKTSAAASEYLADGTEDALSDFTSCATECQASVDRLMTMRPLLTPSQDENFQSYLDNREQFLAMTKEAVAIRGKDGWCVSEDICLNKVTPLAIEANNLAGTIATRQAE 293
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A812Y3D2_9DINO (McpQ protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Y3D2_9DINO) HSP 1 Score: 223 bits (567), Expect = 3.360e-64 Identity = 138/298 (46.31%), Postives = 188/298 (63.09%), Query Frame = 1 Query: 7 ERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVTINSSMTELKEISADWPDDQRALVAELDK---VLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTESQMAAGADARQQLAAAVALLPKIVVLAGAASVLI 891 + S +L+ S + +L+G IHHALSMHRGYMILGLE LADERLEAW I+ M ++ ++A W D + LV + D+ V+ +FRVAQ QIA VS T D PA+ +F A P E+V L I+ EE AS RK+L+ RVTEA+GHLLK+ A++++L SG+E + C+T C ASVDRL LFTA+Q+ANF+ Y++ R F+A A EA+ IR GD + VS+ ICL VTPLA +A ++A I +RQ+E + A A Q A+ +A + + A AAS LI Sbjct: 32 QASDGLLQSSSEAVELSLSLQGEIHHALSMHRGYMILGLEALADERLEAWDLIDGYMRDMDALAAGWDDPE--LVGQYDRFKTVMADFRVAQQQIAEVSWTDGDLPANVQYFDVAEPFGDEMVARLQAILDEEESQAASAERKLLVRRVTEAEGHLLKSRNAISAYLGSGKEEHFERIGSCLTACQASVDRLMTMTGLFTASQQANFDAYISARETFIAEAKEAVAIRSGDEFCVSETICLTQVTPLAIEAVDLAKLIAERQSEFKEEAIAQFEQASASMLATVQAVGFGAIAASTLI 327
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A7X0H3F3_9BACT (Methyl-accepting chemotaxis protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H3F3_9BACT) HSP 1 Score: 191 bits (485), Expect = 2.760e-52 Identity = 107/266 (40.23%), Postives = 160/266 (60.15%), Query Frame = 1 Query: 1 VKERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVTINSSMTELKEISADWPDDQRA-LVAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASES-RKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTES 792 V ++ +PT + LRG IH ALS HRGY+ILGLEEL ER + W I++ EL + + D+ +AEL LK+F +Q +I A++H E+ PA +F +ALP +++ L+ I+ E DLE + + RK+++ V A+ HLLK +AA+ +L+ G E +N + C+ SV++LK D HLFT QRA+F+ Y++ R EFLA+A + I R D W+++Q IC TVTPLA +AD + GEI + TE+ Sbjct: 39 VAHEQDTLVNRDIPTEVKALELRGHIHAALSAHRGYIILGLEELKTERADIWKQIDAETEELIHLVTEAGDEHAIQTMAELQTTLKDFAASQAKIVAIAHERENTPATVLFEDEALPYGKKMQKHLEAIMDAE-DLEPTTAERKLMVHHVGNAEAHLLKVTAALTQYLIDGNEEQLSVLNGEIAACARSVEKLKKDVHLFTPAQRADFDAYISHRNEFLAVAGKVIETRSADDWNIAQYICGGTVTPLAIKADGLIGEIAHQSTET 303
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A7C6EYM6_9GAMM (Methyl-accepting chemotaxis protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C6EYM6_9GAMM) HSP 1 Score: 117 bits (293), Expect = 7.890e-26 Identity = 78/266 (29.32%), Postives = 138/266 (51.88%), Query Frame = 1 Query: 28 EESVPTMLNVSTLRGSIHHALSMHRGYMILG-----LEELADERLEAWVTINSSMTELKEISADWPDDQRA-LVAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEES-DEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTESQMAA 804 E +PT++ L IH +L+ RGYMILG E+ ER + W I+ ++ ++ ++S W D L+ EL ++ FRVAQ Q+ ++HTPE+ PA K+ +A P++ +V+ A+ +I EE L A+ RK L++ + +++G A + ++L+SG+ E+++ K + A +++ G LF Q + NY RAEF L + +R D W+++ P A I ++ R ++ ++AA Sbjct: 3 ELRLPTVITGMELTDGIHLSLAGLRGYMILGKDPAKAEKFKAERQQGWNKIDQALEKMDKLSQSWTDPNNVELLNELKDEVQAFRVAQQQVEDIAHTPENIPAVKLLLAEAAPRAAKVISAITAMIEEEATLPATPERKKLLKLLADSRGSFALGLANIRAYLLSGDRRFAEIFLAKWKVN-QARFEQISGMTDLFNIRQLKAWNNYKKIRAEFSPLPEKMFKLRSSDEWNLANHWLGTRAAPKAESITTILTQM--RASQDKLAA 265
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A496VFT1_9GAMM (Histidine kinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496VFT1_9GAMM) HSP 1 Score: 93.6 bits (231), Expect = 1.590e-17 Identity = 62/252 (24.60%), Postives = 120/252 (47.62%), Query Frame = 1 Query: 40 PTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVT-INSSMTELKEISADWPDDQRAL-VAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTE 789 PT N + + HAL+ RG+M+LG E+ ER + W +++ + ++K+ + +W + + +++ +L F Q I ++ TP++ PA K+FF QA+P + + ++I E AS+ RK L+ + E G L+ + A + FL+SG++ + + + LK + L + Q F+ + R F L ++ +R+ W++ PLA+Q I ++ Q + Sbjct: 51 PTAKNSMIMLNGVKHALAALRGWMLLGQEKYKKERAQVWSQELHAPLLQMKKQALNWTQPENVTRLLQVEGILFKFEQFQQDIEDIAQTPDNTPALKMFFEQAVPLETHMSDNIIQMIEWEASEPASDERKALLGIMAEVHGTLVLSFANLQRFLLSGDKQFQTQFEEILRKNEHDFYELKNNIALLSPEQLKAFKAFSTARETFSPLCSQIFQMRRQPDWNLGNYWLATQAAPLADQLITILEQMTDSQQQ 302
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A2E4XPV7_9PROT (Methyl-accepting chemotaxis protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XPV7_9PROT) HSP 1 Score: 90.5 bits (223), Expect = 1.400e-16 Identity = 59/252 (23.41%), Postives = 121/252 (48.02%), Query Frame = 1 Query: 1 VKERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVTINSSMTELKEISADWPDDQRALV-AELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDL--EASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQ 747 +++ + ++ +PT + +I+ +L+ RG+M++ +R W I+ + + ++SA+W + + V E + L+ FRVAQ Q+ +SHTP+++PA KI A P + +V + ++I +E EA +R ++ + + +G L + A + ++L++G+ +K L+ + L TQ A FE + R +F L + +IR W+++ + P A + Sbjct: 35 LQDNTDRIVNLRMPTAQASQQMMNNINASLAALRGWMLIENPTFKKQRAAVWANIDQTRQTMDQLSANWTNPENVKVWTEFKETLEEFRVAQQQVEDISHTPDEQPATKILVEAAAPLAAVMVAKITEMIDDELSRAGEADGNRVPILGVMADVRGTLGLSLANIRAYLLTGDPKFAEKFDKLWAKNEVRFKDLQAVSTLLNETQFAAFEAFAENRVKFAPLPPKMFDIRGSKKWNMANYLLATEAAPRAGK 286
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A496W9I6_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496W9I6_9GAMM) HSP 1 Score: 90.5 bits (223), Expect = 1.740e-16 Identity = 66/252 (26.19%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 40 PTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVT-INSSMTELKEISADW-PDDQRALVAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIRKGDLWSVSQDICLNTVTPLANQADNIAGEIVQRQTE 789 PT N + ++ AL+ + +M+LG + +R E W T + + + ELK++S +W +Q + E+ +L + Q +I ++ TP++ PA K+FF QA+ S + L ++I E +A+ RK L+ + + + L + A + +FL+SG+ + + LK +L T Q FE + R F+ L+T+ + +R+ W+ LA QA +A ++V+R E Sbjct: 49 PTAKNSMIMLNGVNQALAALQNWMLLGEAKFKQDRQEIWATQVQAPLRELKKLSVNWIHSEQIERLREIKTLLSQLKQIQQEIEEIAQTPDNIPALKLFFEQAVSLSNIMSNNLTQMIDLELKQKANPERKALLGMMADVRSTLGLSLANIRAFLLSGKSAFRSDFEALWLQNETRFNELKAQKNLLTPEQLTAFELFSQSRNRFMPLSTQMLAMREKPDWNRGNYW-------LATQAAPLAAQLVERLEE 293
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A3C0I666_9GAMM (Histidine kinase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0I666_9GAMM) HSP 1 Score: 87.4 bits (215), Expect = 1.890e-15 Identity = 64/243 (26.34%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 7 ERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVT-INSSMTELKEISADW--PDDQRALVAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIR------KGDLWSVSQ 708 E S + + PT N + ++ L+ + +M+LG + ER E W T + + + ELK++S +W P+ L E+ +L + Q I ++ TP++ PA K+FF QA+ S + + ++I E A+ RK L+ + + +G L + A + +FL+SG+ + LK +L T Q FE + R+ F+ L+T+ + +R +G+ W SQ Sbjct: 40 ELSHHITDIHTPTAKNSMMMLNGVNQTLAALQSWMLLGEAKFKQERQEIWATQVQAPLQELKKLSLNWIHPEHIEQL-REIKNLLSQLKQFQQNIEEIAQTPDNMPALKLFFEQAVSLSNIMSNNITQMIDLELKQGANPERKALLGMMADVRGTLGLSLANIRAFLLSGKSEFRSDFEVLWFKNETRFNDLKSQKNLLTPEQLKAFELFSQSRSRFMPLSTKMLEMRDQPNWNRGNYWLASQ 281
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A836SAP8_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836SAP8_9GAMM) HSP 1 Score: 86.7 bits (213), Expect = 2.340e-15 Identity = 63/243 (25.93%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 7 ERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVT-INSSMTELKEISADW--PDDQRALVAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRKILIERVTEAKGHLLKASAAVASFLVSGEESDEMYVNKCVTDCSASVDRLKGDAHLFTATQRANFENYLARRAEFLALATEAINIR------KGDLWSVSQ 708 E S + + PT N + ++ L+ + +M+LG + ER E W T + + + ELK++S +W P+ L E+ +L + Q I ++ TP++ PA K+FF QA+ S + + ++I E A+ RK L+ + + +G L + A + +FL+SG+ + LK ++ T Q FE + R+ F+ L+T+ + +R +G+ W SQ Sbjct: 40 ELSHHITDIHTPTAENSMMMLNGVNQTLAALQSWMLLGEAKFKQERQEIWATQVQAPLQELKKLSLNWIHPEHIEQL-REIKNLLSQLKQFQQNIEEIAQTPDNMPALKLFFEQAVSLSNIMSNNITQMIDLELKQGANSERKALLGMMADVRGTLGLSLANIRAFLLSGKSEFRSDFEVLWFKNETRFNDLKSQKNMLTPEQLKAFELFSQSRSRFMPLSTKMLEMRDQPNWNRGNYWLASQ 281
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Match: A0A1W9X6Z1_9GAMM (Uncharacterized protein n=1 Tax=Beggiatoa sp. 4572_84 TaxID=1972449 RepID=A0A1W9X6Z1_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 9.210e-9 Identity = 37/131 (28.24%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 40 PTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEAWVT-INSSMTELKEISADWPDDQRAL-VAELDKVLKNFRVAQDQIAAVSHTPEDRPADKIFFGQALPKSQEVVGALDKIIAEEHDLEASESRK 426 PT N + + HAL+ RG+M+LG E+ ER + W +++ + ++K+ + +W + + +++ +L F Q I ++ TP++ PA K+FF QA+P + + ++I E AS+ RK Sbjct: 51 PTAKNSMIMLNGVKHALAALRGWMLLGQEKYKKERAQVWSQELHAPLLQMKKQALNWTQPENVTRLLQVEGILFKFEQFQQDIEDIAQTPDNTPALKMFFEQAVPLETHMSDNIIQMIEWEASEPASDERK 181 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82865.19361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82865.19361.1 >prot_M-pyrifera_M_contig82865.19361.1 ID=prot_M-pyrifera_M_contig82865.19361.1|Name=mRNA_M-pyrifera_M_contig82865.19361.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp VKERSSFVLEESVPTMLNVSTLRGSIHHALSMHRGYMILGLEELADERLEback to top mRNA from alignment at M-pyrifera_M_contig82865:8..904+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82865.19361.1 ID=mRNA_M-pyrifera_M_contig82865.19361.1|Name=mRNA_M-pyrifera_M_contig82865.19361.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig82865:8..904+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82865:8..904+ >mRNA_M-pyrifera_M_contig82865.19361.1 ID=mRNA_M-pyrifera_M_contig82865.19361.1|Name=mRNA_M-pyrifera_M_contig82865.19361.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1794bp|location=Sequence derived from alignment at M-pyrifera_M_contig82865:8..904+ (Macrocystis pyrifera P11B4 male)back to top |