mRNA_M-pyrifera_M_contig109265.1936.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: A0A7V3UJB4_9BACT (Thymidine phosphorylase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UJB4_9BACT) HSP 1 Score: 275 bits (702), Expect = 2.050e-87 Identity = 137/202 (67.82%), Postives = 163/202 (80.69%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
+ LL E GLS AA RLL Q G+ V LSHPAPV+SL+ VR K+YG L A + I+ DIVAGRY DVHL+AFITAC+ DRLDR E+V LT+AM+ G+RL W ++DKHSVGGLPGNRTT ++VPIVAA+GLT+PKTSSRAITSP+GTADTMET+APVDLD+A +RRVVE EGGCIAWGG++ LSPADD+LIRVE
Sbjct: 51 ITTDLLALDEVGLSEAAWRLLGAQEGDQVVLSHPAPVESLSHVRAKVYGKRLDAAAMGVIIQDIVAGRYSDVHLSAFITACSKDRLDRQEMVALTQAMIEGGERLDWGRTPVMDKHSVGGLPGNRTTLLVVPIVAAYGLTIPKTSSRAITSPAGTADTMETVAPVDLDIADIRRVVEREGGCIAWGGALRLSPADDILIRVE 252
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: A0A521S325_9BACT (Thymidine phosphorylase family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521S325_9BACT) HSP 1 Score: 273 bits (699), Expect = 7.790e-87 Identity = 136/202 (67.33%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
V LL PGE GLS AA RLL G PV LSHP P++SL+ VR K+YGN L + +IV D+ AGRY DVHL++F+TACA +RLD E++ LT AM+ AG+RL W H ++DKH VGGLPGNRTT +IVPIVAA GLTMPKTSSRAITSP+GTADTMETLAPV LD A MRR VE EGGCI WGG+V LSPADD+LIRVE
Sbjct: 62 VTSDLLTPGEVGLSEAAWRLLGTTEGSPVLLSHPPPLESLSHVRAKVYGNRLSEEAMASIVRDVAAGRYSDVHLSSFVTACAGERLDLDEMIALTRAMIAAGERLRWNHAPVMDKHCVGGLPGNRTTLLIVPIVAAFGLTMPKTSSRAITSPAGTADTMETLAPVILDAAAMRRAVEQEGGCIVWGGAVRLSPADDILIRVE 263
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: A0A521RRW6_9BACT (Thymidine phosphorylase family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521RRW6_9BACT) HSP 1 Score: 274 bits (700), Expect = 8.210e-87 Identity = 132/202 (65.35%), Postives = 162/202 (80.20%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
+ LL+PGEAGLS +A +LL + + ++LSHPAP++SL VR K+YG LG E+ I+ D+ GRY DVHLA+FITA A DRLD +E+V LT AM+ G+R+HW ++DKHS+GGLPGNRTT ++VPIVAA GLT+PKTSSRAITSP+GTADTMETLAPV LD+A+MRRVVE EGGCI WGGSV LSPADD+LIRVE
Sbjct: 77 LNTDLLKPGEAGLSESAWKLLGAKEEDRITLSHPAPLESLGHVRAKVYGKRLGEAEMNDIIRDVAVGRYSDVHLASFITASAGDRLDTSEMVALTRAMIAVGERIHWSRTPVMDKHSIGGLPGNRTTLLVVPIVAAFGLTIPKTSSRAITSPAGTADTMETLAPVALDIASMRRVVEREGGCIVWGGSVRLSPADDILIRVE 278
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: UPI000AA3E79F (hypothetical protein n=1 Tax=Pseudoxanthomonas mexicana TaxID=128785 RepID=UPI000AA3E79F) HSP 1 Score: 266 bits (679), Expect = 2.130e-86 Identity = 136/198 (68.69%), Postives = 156/198 (78.79%), Query Frame = 1
Query: 13 LLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
L+ PGEA LS +A L V G P+ +SH +DSLA VRR+IYG+ L A LQA+VAD+ AGRY DVHLAAF+TA A LD E V LT AM+ AG+RL W +VDKH +GGLPGNRTTPI+V IVAAHGL MPKTSSRAITSP+GTADTMETLAPVDLDLATMRRVV+ EGGCIAWGG+V LSPADD+ +RVE
Sbjct: 70 LVAPGEAALSESAWERLGVAEGAPIEVSHAPALDSLASVRRRIYGHRLDAAALQAVVADVTAGRYTDVHLAAFLTASAALPLDEQETVDLTAAMIDAGERLTWNAPVVVDKHCIGGLPGNRTTPIVVAIVAAHGLVMPKTSSRAITSPAGTADTMETLAPVDLDLATMRRVVDQEGGCIAWGGAVHLSPADDIFVRVE 267
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: UPI001AC6EF50 (Thymidine phosphorylase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AC6EF50) HSP 1 Score: 271 bits (693), Expect = 7.460e-86 Identity = 138/202 (68.32%), Postives = 158/202 (78.22%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
V +L+ GE GLS AA RLL + G+ SHPAPVDS++ +R KIYG+ALGA E AI+ DIV GRY DVHLAAFITAC+ D L TE + LT AMV AG+++ WP + I+DKHSVGGLPGNRTTPIIV IVAA+GL MPKTSSRAITSP+GTADTMETLAPV L L MR VVE EGGC+ WGGS LSPADD+LIRVE
Sbjct: 69 VHGELISQGEVGLSEAAWRLLEPKEGDLAQFSHPAPVDSMSALRAKIYGHALGASEFNAIIRDIVDGRYADVHLAAFITACSGDHLSATETIDLTRAMVAAGKQIAWPRKPILDKHSVGGLPGNRTTPIIVAIVAANGLCMPKTSSRAITSPAGTADTMETLAPVALSLEQMRSVVEKEGGCVVWGGSADLSPADDILIRVE 270
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: UPI0011058677 (thymidine phosphorylase family protein n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI0011058677) HSP 1 Score: 268 bits (685), Expect = 1.010e-84 Identity = 133/202 (65.84%), Postives = 159/202 (78.71%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
V +L+ GEAGLS A L + G+ + +SHP V SL+FVR KIYGNAL +++ I+ DIVAG Y D+H+++F+TACA RL+R EIV LT AMV +G RL W + +VDKH VGGLPGNRTTPI+V IVAA+GLTMPKTSSRAITSP+GTADTME LAPVDLD+ MRRVVE EGGC+ WGGSVSLSPADD+LIRVE
Sbjct: 61 VNSDILKQGEAGLSKYAFEKLGAREGDEIHVSHPPAVHSLSFVRSKIYGNALSDHQIRTIIEDIVAGHYSDIHISSFLTACAGGRLNREEIVSLTRAMVDSGDRLDWGRELVVDKHCVGGLPGNRTTPIVVAIVAAYGLTMPKTSSRAITSPAGTADTMEVLAPVDLDVPQMRRVVEQEGGCVVWGGSVSLSPADDLLIRVE 262
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: A0A0L1MHP6_PSESX (Putative thymidine phosphorylase n=14 Tax=Pseudomonas TaxID=286 RepID=A0A0L1MHP6_PSESX) HSP 1 Score: 265 bits (677), Expect = 1.520e-83 Identity = 134/202 (66.34%), Postives = 158/202 (78.22%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
V Q + GE GLS +A +LL Q GE V++ HPAP++S++ VR KIYGNAL L AIV DI AGR+ DV LAAF+T CA +++ TEI YLTEAMV G+RLHW ++DKH VGGLPGNRTTPI+V IVAA+GL +PKTSSRAITSP+GTAD METLAPVDLDL TMRRVVE EGGC+ WGG++ LSP DDVLIRVE
Sbjct: 60 VDGQWIGGGEVGLSESAWQLLGAQEGENVAVHHPAPIESMSAVRGKIYGNALSRETLTAIVNDIDAGRFSDVELAAFLTGCAGNQMSLTEIRYLTEAMVEVGERLHWDRPLVLDKHCVGGLPGNRTTPIVVAIVAANGLCIPKTSSRAITSPAGTADAMETLAPVDLDLPTMRRVVEQEGGCVVWGGAMQLSPTDDVLIRVE 261
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: C5T3Z9_ACIDE (Thymidine phosphorylase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN TaxID=573060 RepID=C5T3Z9_ACIDE) HSP 1 Score: 259 bits (663), Expect = 5.870e-83 Identity = 128/192 (66.67%), Postives = 153/192 (79.69%), Query Frame = 1
Query: 31 AGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
AGLS +A L Q GEPV+++H P+DSL+ VR K+YGN+LG + AI++D+ AGRY D+HLA FITACA DRLD E V LT+AM+ G+R+ W +VDKH VGGLPGNRTT ++VPIVAA GLTMPKTSSRAITSP+GTADTME LAPV+LD+ +MRRVVE GGCI WGGSV LSPADD+LIRVE
Sbjct: 79 AGLSESAWASLGAQPGEPVAVTHAPPLDSLSHVRAKVYGNSLGDAQFGAIISDVAAGRYSDLHLATFITACAGDRLDLAETVSLTKAMIAVGERIDWGRPLVVDKHCVGGLPGNRTTLLVVPIVAACGLTMPKTSSRAITSPAGTADTMEVLAPVNLDVPSMRRVVERTGGCIVWGGSVRLSPADDILIRVE 270
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: TYPH_POLSJ (Putative thymidine phosphorylase n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=TYPH_POLSJ) HSP 1 Score: 263 bits (672), Expect = 9.970e-83 Identity = 132/202 (65.35%), Postives = 154/202 (76.24%), Query Frame = 1
Query: 1 VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
V L P EAGLS AA RLL Q G+ VS HPAP++SL VR K+YG L + A++ D+ AGRY D+ LAAF+TACA DRLD+ E V LT AMV AG+R+ W ++DKH VGGLPGNRTT +IVPIVAA GL MPKTSSRAITSP+GTADTMETLAPVDLD+A +RRVVE GGC+ WGG+V LSPADD+LIRVE
Sbjct: 67 VSGDFLAPDEAGLSEAAWRLLGAQEGDMVSPRHPAPIESLGHVRAKVYGRHLTQAAITAVIEDVTAGRYSDLQLAAFVTACAGDRLDQEETVSLTRAMVAAGERIDWGEGLVMDKHCVGGLPGNRTTMVIVPIVAACGLRMPKTSSRAITSPAGTADTMETLAPVDLDVAQIRRVVERTGGCVVWGGAVRLSPADDILIRVE 268
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Match: A0A140GUM8_9HYPH (Putative thymidine phosphorylase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUM8_9HYPH) HSP 1 Score: 263 bits (671), Expect = 1.410e-82 Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 1
Query: 13 LLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNALGAGELQAIVADIVAGRYMDVHLAAFITACANDRLDRTEIVYLTEAMVVAGQRLHWPHQRIVDKHSVGGLPGNRTTPIIVPIVAAHGLTMPKTSSRAITSPSGTADTMETLAPVDLDLATMRRVVETEGGCIAWGGSVSLSPADDVLIRVE 606
L+R EA LS +A + L ++ G+ +S+SHP+P+DSL+ VR +IYG+ L L AI+ D+V+G+Y D+HLA+FITACA LD E++ LT AMV +G+RL WP IVDKHS+GGLPGNRTTPIIVPIVA+ GL MPKTSSRAITSP+GTADTMETLAPVDLD +RRVVE EGGCI WGG++ LSPADD+LIRVE
Sbjct: 72 LIRRDEAALSESAWKRLGLKEGDRISVSHPSPLDSLSHVRSRIYGHDLTEASLHAIIEDVVSGKYSDIHLASFITACATRPLDHNEVLALTHAMVESGERLKWPAGTIVDKHSIGGLPGNRTTPIIVPIVASLGLVMPKTSSRAITSPAGTADTMETLAPVDLDTKEIRRVVECEGGCIVWGGAIRLSPADDILIRVE 269 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109265.1936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109265.1936.1 >prot_M-pyrifera_M_contig109265.1936.1 ID=prot_M-pyrifera_M_contig109265.1936.1|Name=mRNA_M-pyrifera_M_contig109265.1936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp VGEQLLRPGEAGLSNAARRLLAVQNGEPVSLSHPAPVDSLAFVRRKIYGNback to top mRNA from alignment at M-pyrifera_M_contig109265:2..607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109265.1936.1 ID=mRNA_M-pyrifera_M_contig109265.1936.1|Name=mRNA_M-pyrifera_M_contig109265.1936.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig109265:2..607+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109265:2..607+ >mRNA_M-pyrifera_M_contig109265.1936.1 ID=mRNA_M-pyrifera_M_contig109265.1936.1|Name=mRNA_M-pyrifera_M_contig109265.1936.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig109265:2..607+ (Macrocystis pyrifera P11B4 male)back to top |