mRNA_M-pyrifera_M_contig82850.19356.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82850.19356.1
Unique NamemRNA_M-pyrifera_M_contig82850.19356.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: A0A7Y2GSZ4_9ACTN (AAA family ATPase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GSZ4_9ACTN)

HSP 1 Score: 362 bits (928), Expect = 1.080e-120
Identity = 188/300 (62.67%), Postives = 228/300 (76.00%), Query Frame = 1
Query:    1 LPGVEVAVGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            +P VE +VGPAV  SGAD+ PLVE +AN LAA+  P VLV+DDYHL++N  ID AVEQLIE AP NFTL VCTR DP LRLSR+RVRGQLAEIRA DLRF  DEA+ LL+ RG +     VEALCERTEGWAAGLVLA +SLA + D DAF+  F+GDDRLVVDYLT+EFLS  S  DR R L TS+LD L GPL+DAVC+  DG+ WL  TAA+NQLL+ LDR+  W+RYHHLL D+LRLEA + L  E+ +LH RAG+WH  +G++  A +H L+ G L  AAD+I D + +L++RGQ
Sbjct:   96 VPDVEASVGPAVAQSGADSAPLVETLANALAASGEPAVLVLDDYHLVNNPAIDAAVEQLIETAPHNFTLVVCTRLDPPLRLSRMRVRGQLAEIRAGDLRFEPDEAATLLEHRGASSTRQHVEALCERTEGWAAGLVLAELSLAGAVDRDAFVEDFRGDDRLVVDYLTDEFLSQASQGDRHRYLTTSILDELSGPLVDAVCDCDDGTAWLQATAATNQLLIGLDRSRNWFRYHHLLRDMLRLEAHQVL--EVDQLHHRAGQWHRTNGNLDRAADHLLAAGELRNAADVIADYSMDLLDRGQ 393          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: UPI0013C333D5 (AAA family ATPase n=1 Tax=Euzebya tangerina TaxID=591198 RepID=UPI0013C333D5)

HSP 1 Score: 315 bits (808), Expect = 4.510e-99
Identity = 162/299 (54.18%), Postives = 207/299 (69.23%), Query Frame = 1
Query:    7 GVEVAVGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQL 903
            G++ AVG A   +  D  P+V  + N +A    P+VLV+DD HL++   + D +E L+ +AP    + + TR DP+L L RLRVRG+LAE+RA DLRF  DEA AL++  G   D   +  LCERTEGWAAGLVLA +SLA++ D    +AAF+GDDRLVVDYL+EEFLS   + DR+RLLRTSVL+R   PL+DAVC T DG  WL   AA+NQ+++SLDRT TW+RYHHLL DLL LEA   L  EL  LH  A  WH ++G  HDAVEH L+ G L+ A DL++D A +LMNRGQ+
Sbjct:  100 GLDDAVGAATSQAALDPSPVVARIVNAIAIDARPLVLVLDDLHLVEEPAVLDGLEHLLAMAPPQLVVVLATRVDPALPLGRLRVRGELAEVRAADLRFNADEARALVEVDGDALDVDDLATLCERTEGWAAGLVLASLSLASAQDRSGVVAAFRGDDRLVVDYLSEEFLSQQESGDRDRLLRTSVLERFSAPLVDAVCGTDDGWAWLRRMAATNQMVISLDRTATWFRYHHLLSDLLLLEARAELGDELEALHRAAATWHESYGDPHDAVEHRLAAGDLDIAIDLLWDHAADLMNRGQI 398          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: A0A349B998_9ACTN (HTH luxR-type domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B998_9ACTN)

HSP 1 Score: 305 bits (782), Expect = 2.760e-95
Identity = 159/301 (52.82%), Postives = 207/301 (68.77%), Query Frame = 1
Query:    1 LPGVEVAVGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQL 903
            +P    +V P V  +G DA  LV  + N LA    P+++V+DD+HLIDN  +   VE+L+EL P++ T  + TR DP  RL RLRVR Q+ E+RA DLRF   EA  LL     T DA   + +CERTEGWAAGLVLAG+SLA+S D  AF+  F GDD LVVDYLT+E L  + + +R+RLL TS+L+RL GPL+DAVC T+DG+ WL + AA NQL++ LD T TW+RYHHLL D+LRLEAER++   L   H  A RWHH HG +  A++H++  G LE AADLI + AT+L+N GQ+
Sbjct:   96 VPATTRSVQPTVASTGGDADALVPTLVNALATLDGPLIIVVDDHHLIDNPRVHAGVERLVELCPDHVTFVLVTRSDPPFRLGRLRVRQQITELRAADLRFDAREAGELLD----TVDAALADRMCERTEGWAAGLVLAGISLASSPDPAAFVERFGGDDTLVVDYLTDELLGTLDSGERQRLLETSLLERLNGPLVDAVCGTSDGATWLRQLAAHNQLVIGLDHTATWFRYHHLLRDVLRLEAERTMAERLPAFHLAAARWHHRHGDLDIAIDHYIDAGELETAADLIGEHATQLLNGGQI 392          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: A0A6C7EH71_ILUCY (Putative LuxR family transcriptional regulator n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7EH71_ILUCY)

HSP 1 Score: 299 bits (766), Expect = 7.090e-93
Identity = 154/279 (55.20%), Postives = 188/279 (67.38%), Query Frame = 1
Query:   64 LVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            +V  V N +      VVLV+DDYHLIDN+ +   VEQLI   P N  L V TR DP  RL RLRVR Q+AEIRA DLRF  DEAS LL       D   V+ LC+RTEGWAAGLVLAG+SL    + D F+A+F GDD+L+ DYL EE L  +   +R RLL  SVL+R+ GPLIDAVC T DG++WL   A +NQL+++LDRTGTW+R+HHLL DLLRLE ERS      ELH  AG WH   G + DA+EH + GG   +AADL+ D AT L+N+G+
Sbjct:  116 VVTAVVNTVTEHADEVVLVLDDYHLIDNAAVHQTVEQLIGFRPSNLVLVVSTRVDPPFRLGRLRVRNQVAEIRAADLRFDEDEASWLLDAEALGLDRTAVDRLCDRTEGWAAGLVLAGLSLPTEGNVDEFVASFHGDDQLIADYLAEELLDSLDDDERARLLDASVLERMSGPLIDAVCGTDDGADWLRTIAGTNQLVIALDRTGTWFRFHHLLRDLLRLELERSAPERRQELHAAAGEWHRDDGDLEDAIEHFIEGGRRVEAADLVADNATTLLNKGR 394          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: A0A2Z3USD6_9ACTN (HTH luxR-type domain-containing protein n=4 Tax=Streptosporangium TaxID=2000 RepID=A0A2Z3USD6_9ACTN)

HSP 1 Score: 280 bits (715), Expect = 2.900e-85
Identity = 150/293 (51.19%), Postives = 194/293 (66.21%), Query Frame = 1
Query:   22 VGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            V P V GS  D   +V  + NELA    P+V+VIDDYHLIDN  +   +E+LI+L P   T+ + TR DP  RL RLRVR Q+AE+R  DLRF TDEAS LL   G + D   ++ LC RTEGWAAGLVLAG+SL  ++D   FI AF+GDD+ VV+YL +EFL+ + A DR+RLL TSVL++  G L+D++  TT G++WL +TA  NQLL+ LDRTGTW+RYHHLL DLLRLEA ++    +  LH RA  W  + G    A+ H L+GG +  AA L+      L+  GQ
Sbjct:  105 VKPVVVGSKGDDLVVVSALVNELAKIADPLVVVIDDYHLIDNGSVHRGMERLIDLCPRQVTVVLSTRIDPPFRLGRLRVRDQIAEVRGADLRFDTDEASGLLGSAGQSLDRSLLDQLCGRTEGWAAGLVLAGLSLERASDPGEFIEAFRGDDQFVVEYLHDEFLAVVDANDRQRLLETSVLEQFNGALVDSLTGTTGGAKWLSDTAVVNQLLIGLDRTGTWFRYHHLLRDLLRLEARQAFPERIPGLHARAAAWFESQGDHGQAIVHRLAGGDVHGAAQLLLVHGPRLLASGQ 397          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: UPI0011D18941 (LuxR C-terminal-related transcriptional regulator n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI0011D18941)

HSP 1 Score: 278 bits (711), Expect = 8.620e-85
Identity = 152/279 (54.48%), Postives = 187/279 (67.03%), Query Frame = 1
Query:   64 LVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            +V  V NE+A     +VLV+DDYHL+ N  +  +VEQL+E  P N  L V TR DP  RL RLRVR QL E+RA DLRF  DEA  LL           V+ L +RTEGWAAGLVLA +SL  SAD DAF+ +F GDD+LV DYL +EFL  +   DR+RLL  SVL+R+ GPLID +    DG+ WL   AASNQL++SLDR GTW+R+HHLL D+LRLEA+R+    ++ELH  AG WH   GS  +A+EH L  G  E+AADLI   AT L+NRGQ
Sbjct:  113 VVTTVVNEVAGIEVSIVLVVDDYHLVTNPDVHRSVEQLVERLPRNLVLVVSTRVDPPFRLGRLRVRDQLTEVRADDLRFDLDEARWLLDADIVGLGNVAVDRLLQRTEGWAAGLVLAALSLRKSADVDAFVDSFHGDDQLVADYLADEFLETL-LDDRDRLLDASVLERMSGPLIDELTGGDDGARWLQSIAASNQLVISLDRNGTWFRFHHLLRDMLRLEAQRTAPERVAELHRIAGDWHDRAGSADEAIEHLLQAGESERAADLIAANATRLLNRGQ 390          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: UPI001A3FF5F6 (Helix-turn-helix transcriptional regulator n=1 Tax=Acrocarpospora phusangensis TaxID=1070424 RepID=UPI001A3FF5F6)

HSP 1 Score: 278 bits (710), Expect = 1.400e-84
Identity = 149/297 (50.17%), Postives = 193/297 (64.98%), Query Frame = 1
Query:   10 VEVAVGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            + V + P V GS  D   +V  + N LA    P+V+VIDDYHLI N  +   VE+L+EL P   T+ + TR DP  RL RLRVRGQLAEIR  DLRF TDEAS LL     + D   ++ LC+R EGWAAGLVLAG+SL  +AD   FI AF+GDD+L+V+YL +EFL+ +   D  RLL TS+ ++L G L+D V  TT G++WL +TA  NQLL+ LDRT TW+RYHHLL DLLRLEA ++    + ELH RA  W  + G +  A+ H L+GG + +AA L+      L+  GQ
Sbjct:   95 IAVDLEPVVAGSNGDDFVVVSALVNALADVAVPLVVVIDDYHLIGNGSVQRGVERLVELCPYQVTIVISTRIDPPFRLGRLRVRGQLAEIRGADLRFDTDEASGLLGSAVRSLDRALLDQLCDRAEGWAAGLVLAGLSLERAADPGEFIEAFRGDDQLIVEYLRDEFLATVDKDDLRRLLETSIPEQLSGALVDFVTGTTGGAKWLSDTAGRNQLLIGLDRTRTWFRYHHLLRDLLRLEAHQTFPERIPELHARAAEWFESQGDLGQAIVHRLAGGEVHQAAQLLLFHGPRLLAGGQ 391          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: UPI001A0C484C (AAA family ATPase n=2 Tax=Nonomuraea cypriaca TaxID=1187855 RepID=UPI001A0C484C)

HSP 1 Score: 276 bits (706), Expect = 6.110e-84
Identity = 146/292 (50.00%), Postives = 191/292 (65.41%), Query Frame = 1
Query:   28 PAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQL 903
            P V GS  D   +V  + N LA   SP+V+VIDDYHL+DN  +   +E+LI+L P   T+ + TR DP  RL RLRVR Q+AEIR  DLRF TDEAS LL     + D   ++ LC RTEGWAAGLVLAG+SL  + D   FI AF+GDD+LVV+YL +EF   +   DR+RLL TS+L+ L G L+D+V  T  G++WL +TA+ NQLL+ LDRT  W+RYHHLL DLLRLEA+++    +  LH RA  W  +HG    A+ H L+GG + +AA L+      L+  GQ+
Sbjct:  107 PVVVGSNGDDLVVVTALVNALAEVASPLVIVIDDYHLMDNGSVQRGMERLIDLCPHQVTIVLSTRIDPPFRLGRLRVRDQIAEIRGADLRFDTDEASGLLGSAVQSLDRALLDQLCGRTEGWAAGLVLAGLSLERATDPSEFIEAFRGDDQLVVEYLRDEFFVAVDVDDRQRLLETSILEHLSGALVDSVTGTAGGAKWLSDTASVNQLLIGLDRTRMWFRYHHLLRDLLRLEAQQAFPERIPGLHARAAAWFESHGDHGQAIVHRLAGGDVHEAAQLLLVHGPRLLASGQI 398          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: UPI0018479674 (AAA family ATPase n=1 Tax=Nonomuraea sp. TaxID=1883105 RepID=UPI0018479674)

HSP 1 Score: 272 bits (695), Expect = 7.650e-84
Identity = 155/290 (53.45%), Postives = 189/290 (65.17%), Query Frame = 1
Query:   31 AVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ 900
            AV GS  D   +V  + NELA   +P+VLVIDDYHLI N+ +   VE+LI+L P   T+ + TR DP  RL RLRVR  +AEIR  DLRF TDEA+ LL       D   V  LC RTEGWAAGLVLAG+SL  +AD   FI AF+GDD LVV+YL +EFL+   A DR RLL TS+LD+L GPL+DAV  TT G+ WL +TA +NQLL+ LDR  TW+RYHHLL DLLRLEA ++    L  LH RA  W  + G    A+ H L+GG  E+AA L+      L+  GQ
Sbjct:  106 AVAGSNGDDLVVVSALVNELAEA-APLVLVIDDYHLIGNAGVHRGVERLIDLCPPQVTVVLATRIDPPFRLGRLRVRDTIAEIRGADLRFDTDEATGLLGSL----DRALVGRLCGRTEGWAAGLVLAGLSLGRAADAGVFIEAFRGDDHLVVEYLRDEFLATAGADDRTRLLETSILDQLNGPLVDAVTGTTGGARWLADTARTNQLLIGLDRARTWFRYHHLLRDLLRLEARQTFPERLPGLHARAAAWFESQGDHGQAIVHRLAGGEAEQAARLLLVHGPRLLAAGQ 390          
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Match: A0A662DZL2_9ACTN (HTH luxR-type domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DZL2_9ACTN)

HSP 1 Score: 275 bits (703), Expect = 1.120e-83
Identity = 146/294 (49.66%), Postives = 192/294 (65.31%), Query Frame = 1
Query:   22 VGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNSVIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRFATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDAFIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVCETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGELSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQL 903
            V P V GS AD   +V  + N L     P+V+VIDDYHLI++  +   +E+LIEL P   T+ + TRFDP  RL R+RVR Q+AEIR  DLRF + EA+ LL     + + +QV+ +C RTEGWAAGLVLAG+SL  +AD +AF+ AF GDD+LVVDYL+EEFL  I   DR  LL TS+LD+L GPLID V     G++WL  T  SNQLL+ LD TGTW+RYHHLL DLLR+EA       ++ LH+RA  W  + G    A+ H +  G  ++AA L++   + L+  GQ+
Sbjct:  103 VKPTVVGSNADELVVVPELVNRLGQLGEPLVIVIDDYHLIESVRVHRGIERLIELCPPGVTIVLSTRFDPPFRLGRMRVRNQIAEIRGADLRFDSGEAADLLGAAVQSLEPNQVDKICGRTEGWAAGLVLAGISLERAADPEAFLEAFHGDDQLVVDYLSEEFLGSIDPGDRRMLLETSILDQLTGPLIDKVTGAAGGTQWLRRTVKSNQLLIGLDSTGTWFRYHHLLRDLLRVEAGHEFPERVAVLHERAAEWFESQGDDAKAIAHRMEAGQRDEAARLMFGYGSALLANGQI 396          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82850.19356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2GSZ4_9ACTN1.080e-12062.67AAA family ATPase n=1 Tax=Acidimicrobiales bacteri... [more]
UPI0013C333D54.510e-9954.18AAA family ATPase n=1 Tax=Euzebya tangerina TaxID=... [more]
A0A349B998_9ACTN2.760e-9552.82HTH luxR-type domain-containing protein n=1 Tax=Ac... [more]
A0A6C7EH71_ILUCY7.090e-9355.20Putative LuxR family transcriptional regulator n=2... [more]
A0A2Z3USD6_9ACTN2.900e-8551.19HTH luxR-type domain-containing protein n=4 Tax=St... [more]
UPI0011D189418.620e-8554.48LuxR C-terminal-related transcriptional regulator ... [more]
UPI001A3FF5F61.400e-8450.17Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI001A0C484C6.110e-8450.00AAA family ATPase n=2 Tax=Nonomuraea cypriaca TaxI... [more]
UPI00184796747.650e-8453.45AAA family ATPase n=1 Tax=Nonomuraea sp. TaxID=188... [more]
A0A662DZL2_9ACTN1.120e-8349.66HTH luxR-type domain-containing protein (Fragment)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82850contigM-pyrifera_M_contig82850:2..904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score300.4
Seed ortholog evalue9.2e-79
Seed eggNOG ortholog1313172.YM304_40110
KEGG koko:K03556
Hectar predicted targeting categoryother localisation
EggNOG free text desc.trisaccharide binding
EggNOG OGsCOG2197@1,COG2197@2,COG2909@1,COG2909@2
COG Functional cat.K
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons1
Model size903
Cds size903
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.3256936-CDS-M-pyrifera_M_contig82850:1..9041622816735.3256936-CDS-M-pyrifera_M_contig82850:1..904Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82850 2..904 +
1692278147.5696921-CDS-M-pyrifera_M_contig82850:1..9041692278147.5696921-CDS-M-pyrifera_M_contig82850:1..904Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82850 2..904 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82850.19356.1prot_M-pyrifera_M_contig82850.19356.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82850 2..904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82850.19356.1

>prot_M-pyrifera_M_contig82850.19356.1 ID=prot_M-pyrifera_M_contig82850.19356.1|Name=mRNA_M-pyrifera_M_contig82850.19356.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
LPGVEVAVGPAVPGSGADAGPLVEGVANELAATTSPVVLVIDDYHLIDNS
VIDDAVEQLIELAPENFTLGVCTRFDPSLRLSRLRVRGQLAEIRAHDLRF
ATDEASALLQQRGTTPDAHQVEALCERTEGWAAGLVLAGMSLAASADGDA
FIAAFQGDDRLVVDYLTEEFLSGISAADRERLLRTSVLDRLCGPLIDAVC
ETTDGSEWLHETAASNQLLVSLDRTGTWYRYHHLLGDLLRLEAERSLDGE
LSELHDRAGRWHHAHGSVHDAVEHHLSGGHLEKAADLIYDEATELMNRGQ
L
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mRNA from alignment at M-pyrifera_M_contig82850:2..904+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82850.19356.1 ID=mRNA_M-pyrifera_M_contig82850.19356.1|Name=mRNA_M-pyrifera_M_contig82850.19356.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=903bp|location=Sequence derived from alignment at M-pyrifera_M_contig82850:2..904+ (Macrocystis pyrifera P11B4 male)
CTCCCAGGGGTCGAAGTGGCCGTCGGCCCGGCCGTTCCCGGATCGGGCGC CGACGCCGGCCCACTCGTCGAGGGAGTGGCGAACGAACTCGCAGCCACGA CGTCCCCGGTCGTGCTGGTGATCGACGACTACCACCTGATCGACAACTCG GTGATCGACGACGCTGTGGAGCAGCTGATCGAGCTTGCACCCGAGAACTT CACGCTCGGGGTGTGCACACGCTTCGACCCGTCGTTGCGCCTGTCACGAC TCCGGGTACGTGGTCAGCTGGCCGAGATCAGGGCACACGACCTGCGGTTC GCGACCGACGAGGCGTCGGCGCTGTTGCAGCAACGCGGGACGACACCCGA CGCCCACCAGGTCGAAGCACTGTGTGAGCGAACCGAGGGGTGGGCCGCCG GTCTGGTCCTGGCGGGGATGTCGCTTGCCGCCAGTGCCGATGGTGACGCG TTCATCGCTGCGTTCCAGGGCGACGATCGCCTCGTCGTCGACTATCTCAC CGAGGAGTTCTTGTCCGGCATCTCGGCCGCCGACCGTGAGCGGCTGCTTC GCACGTCCGTCCTCGACCGCCTCTGTGGGCCACTCATCGACGCGGTGTGT GAGACGACCGATGGCTCCGAGTGGCTGCACGAGACCGCAGCGAGCAACCA GCTTCTCGTGAGCCTGGATCGCACCGGCACCTGGTATCGCTACCACCATC TGCTCGGCGATCTGCTGCGCCTCGAGGCCGAACGCAGCCTGGACGGCGAA CTCTCCGAACTCCACGACCGAGCCGGTCGCTGGCATCATGCCCACGGGAG CGTCCACGATGCGGTCGAGCATCACCTTTCGGGCGGGCACCTCGAGAAGG CGGCAGATCTCATCTACGACGAGGCGACCGAGCTGATGAACCGTGGTCAA CTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82850:2..904+

>mRNA_M-pyrifera_M_contig82850.19356.1 ID=mRNA_M-pyrifera_M_contig82850.19356.1|Name=mRNA_M-pyrifera_M_contig82850.19356.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1806bp|location=Sequence derived from alignment at M-pyrifera_M_contig82850:2..904+ (Macrocystis pyrifera P11B4 male)
CTCCCAGGGGTCGAAGTGGCCGTCGGCCCGGCCGTTCCCGGATCGGGCGC
CGACGCCGGCCCACTCGTCGAGGGAGTGGCGAACGAACTCGCAGCCACGA
CGTCCCCGGTCGTGCTGGTGATCGACGACTACCACCTGATCGACAACTCG
GTGATCGACGACGCTGTGGAGCAGCTGATCGAGCTTGCACCCGAGAACTT
CACGCTCGGGGTGTGCACACGCTTCGACCCGTCGTTGCGCCTGTCACGAC
TCCGGGTACGTGGTCAGCTGGCCGAGATCAGGGCACACGACCTGCGGTTC
GCGACCGACGAGGCGTCGGCGCTGTTGCAGCAACGCGGGACGACACCCGA
CGCCCACCAGGTCGAAGCACTGTGTGAGCGAACCGAGGGGTGGGCCGCCG
GTCTGGTCCTGGCGGGGATGTCGCTTGCCGCCAGTGCCGATGGTGACGCG
TTCATCGCTGCGTTCCAGGGCGACGATCGCCTCGTCGTCGACTATCTCAC
CGAGGAGTTCTTGTCCGGCATCTCGGCCGCCGACCGTGAGCGGCTGCTTC
GCACGTCCGTCCTCGACCGCCTCTGTGGGCCACTCATCGACGCGGTGTGT
GAGACGACCGATGGCTCCGAGTGGCTGCACGAGACCGCAGCGAGCAACCA
GCTTCTCGTGAGCCTGGATCGCACCGGCACCTGGTATCGCTACCACCATC
TGCTCGGCGATCTGCTGCGCCTCGAGGCCGAACGCAGCCTGGACGGCGAA
CTCTCCGAACTCCACGACCGAGCCGGTCGCTGGCATCATGCCCACGGGAG
CGTCCACGATGCGGTCGAGCATCACCTTTCGGGCGGGCACCTCGAGAAGG
CGGCAGATCTCATCTACGACGAGGCGACCGAGCTGATGAACCGTGGTCAA
CTCCTCCCAGGGGTCGAAGTGGCCGTCGGCCCGGCCGTTCCCGGATCGGG
CGCCGACGCCGGCCCACTCGTCGAGGGAGTGGCGAACGAACTCGCAGCCA
CGACGTCCCCGGTCGTGCTGGTGATCGACGACTACCACCTGATCGACAAC
TCGGTGATCGACGACGCTGTGGAGCAGCTGATCGAGCTTGCACCCGAGAA
CTTCACGCTCGGGGTGTGCACACGCTTCGACCCGTCGTTGCGCCTGTCAC
GACTCCGGGTACGTGGTCAGCTGGCCGAGATCAGGGCACACGACCTGCGG
TTCGCGACCGACGAGGCGTCGGCGCTGTTGCAGCAACGCGGGACGACACC
CGACGCCCACCAGGTCGAAGCACTGTGTGAGCGAACCGAGGGGTGGGCCG
CCGGTCTGGTCCTGGCGGGGATGTCGCTTGCCGCCAGTGCCGATGGTGAC
GCGTTCATCGCTGCGTTCCAGGGCGACGATCGCCTCGTCGTCGACTATCT
CACCGAGGAGTTCTTGTCCGGCATCTCGGCCGCCGACCGTGAGCGGCTGC
TTCGCACGTCCGTCCTCGACCGCCTCTGTGGGCCACTCATCGACGCGGTG
TGTGAGACGACCGATGGCTCCGAGTGGCTGCACGAGACCGCAGCGAGCAA
CCAGCTTCTCGTGAGCCTGGATCGCACCGGCACCTGGTATCGCTACCACC
ATCTGCTCGGCGATCTGCTGCGCCTCGAGGCCGAACGCAGCCTGGACGGC
GAACTCTCCGAACTCCACGACCGAGCCGGTCGCTGGCATCATGCCCACGG
GAGCGTCCACGATGCGGTCGAGCATCACCTTTCGGGCGGGCACCTCGAGA
AGGCGGCAGATCTCATCTACGACGAGGCGACCGAGCTGATGAACCGTGGT
CAACTC
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