mRNA_M-pyrifera_M_contig82804.19350.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82804.19350.1
Unique NamemRNA_M-pyrifera_M_contig82804.19350.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A517PT33_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PT33_9PLAN)

HSP 1 Score: 567 bits (1462), Expect = 2.800e-188
Identity = 296/301 (98.34%), Postives = 299/301 (99.34%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            GPLSANNSVSGQNSRT+LPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDP VIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDT EDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNT+DNFSQGIFSTSLDL+YQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG
Sbjct:  952 GPLSANNSVSGQNSRTELPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPTVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTQEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTNDNFSQGIFSTSLDLNYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 1252          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A355GAL2_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GAL2_9PLAN)

HSP 1 Score: 334 bits (856), Expect = 1.030e-106
Identity = 177/301 (58.80%), Postives = 229/301 (76.08%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G L+  NS++G    +++  IVLD VNNAFY+ Y ++GKV AGSQGTG+ QT++DEIS+L++D+NA++QTVNLTGIT G +A++P RVTATSN+P LI DP V Y +P  TGSLTFTP A+QSGVA ITV VEDGGLDGD+ T  DN   QR F V V+YSGE +   I+L+VV+SPT    +G A+ +P + + V EWSS+W+E+WV TDD  SQGI S SL+L+YQ+AYTT T+IE+G  F+  Q  +I+D SG I  L+AET   DLG+S++LLFARIRFESL ED VDLDL+ Q+IG
Sbjct:  295 GSLAPENSIAGSIEGSEISTIVLDEVNNAFYVVYLNEGKVRAGSQGTGVPQTTLDEISNLTLDENASEQTVNLTGITPGSSASSPLRVTATSNNPGLIADPVVSYTSPNSTGSLTFTPAANQSGVATITVIVEDGGLDGDMQTTRDNDTTQRIFKVIVNYSGEPIPVVIDLRVVNSPTTTQQDGEATTLPANLNRVDEWSSYWLEVWVITDDASSQGIDSVSLNLNYQTAYTTGTSIEYGAGFTSLQMESINDQSGIIENLAAETNAVDLGISDYLLFARIRFESLDEDSVDLDLENQRIG 595          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A3C0ADT5_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ADT5_9PLAN)

HSP 1 Score: 332 bits (850), Expect = 6.860e-104
Identity = 176/301 (58.47%), Postives = 228/301 (75.75%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G L+  NS++G    +++  IVLD VNNAFY+ Y ++GKV AGSQGTG+ QT++DEIS+L++D+NA++QTVNLTGIT G +A++P RVTATSN+P LI DP V Y +P  TGSLTFTP A+QSGVA ITV VEDGGLDGD+ T  DN   QR F V V+YSGE +   I+L+VV+SPT    +G A+ +P + + V EWSS+W+E+WV TDD  SQGI   SL+L+YQ+AYTT T+IE+G  F+  Q  +I+D SG I  L+AET   DLG+S++LLFARIRFESL ED VDLDL+ Q+IG
Sbjct:  293 GSLAPENSIAGSIEGSEISTIVLDEVNNAFYVVYLNEGKVRAGSQGTGVPQTTLDEISNLTLDENASEQTVNLTGITPGSSASSPLRVTATSNNPGLIADPVVSYTSPNSTGSLTFTPAANQSGVATITVIVEDGGLDGDMQTTRDNDTTQRIFKVIVNYSGEPIPVVIDLRVVNSPTTTQQDGEATTLPANLNRVDEWSSYWLEVWVITDDASSQGIDFVSLNLNYQTAYTTGTSIEYGAGFTSLQMESINDQSGIIENLAAETNAVDLGISDYLLFARIRFESLDEDSVDLDLENQRIG 593          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: UPI0011898467 (hypothetical protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI0011898467)

HSP 1 Score: 302 bits (774), Expect = 3.380e-90
Identity = 163/301 (54.15%), Postives = 216/301 (71.76%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G ++A NSV G  S  + P+I+LD +NN F +   D+G+V+ GSQ  G     ++EISD+ I +NA +Q V+LTGITAG  + N  RVTATS++ ALIPDP V Y +   TG LTFTP A+Q+G+A ITVT+EDGGLDG+L T EDN   QRTF+V V     S+ AEI+L+VV+SPT +  +G  S +P HQ  V EWSSFW+E+WV+T +  S G  STSL+L+YQ+ Y + T IE+GP FS+NQ+G I+D++G I  LSAET+QT LG+S+  LF RI+FESLA+DGV+LDL  Q IG
Sbjct:  820 GEIAATNSVIGLESSLEPPEIILDEINNTFIVVLKDEGRVWVGSQTDGFKPRILNEISDVIISENATEQNVSLTGITAGSRSGNLLRVTATSSNTALIPDPVVAYTSLDSTGILTFTPAANQTGIAXITVTIEDGGLDGELATTEDNFLSQRTFDVLV-----SIPAEIDLRVVNSPTSVGPDGQTSILPAHQDRVDEWSSFWLEIWVSTSNIESPGFLSTSLNLNYQTEYVSPTVIEYGPGFSVNQTGIINDSTGVIENLSAETSQTGLGISDFFLFTRIKFESLADDGVNLDLLNQLIG 1115          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A517RC11_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RC11_9PLAN)

HSP 1 Score: 302 bits (774), Expect = 3.400e-90
Identity = 164/301 (54.49%), Postives = 216/301 (71.76%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G +S+ NSV G  S    P+I+LD +NN F +   D+G+V+ GSQ  G     ++EISD+ I +N+ +QTVNLTGITAG  + N  RVTATS +  LIPDP V Y +   TGSLTF P A+Q+G A ITVT+EDGGLD +L T EDN + QRTF+V V     S+  +I+L+VVSSPT + A+G AS +P H++   EWSSFW+E+WV+T +  S GIFSTSL+LSYQ+ Y + T IE+G +FS NQ+GTI+D +G I  LSA T QTDLG+S++LLF RI+FESLA+DGV+LD+  Q IG
Sbjct:  820 GEISSTNSVIGTESSLKPPEIILDEINNTFIVVLKDEGRVWVGSQADGFQPRILEEISDVIISENSTEQTVNLTGITAGSRSGNQLRVTATSGNTDLIPDPVVSYTSLDSTGSLTFIPSANQTGTATITVTIEDGGLDRELATTEDNFWSQRTFDVLV-----SIPVDIDLRVVSSPTAVRADGHASTLPTHRNRADEWSSFWLEIWVSTTNIQSPGIFSTSLELSYQTEYISPTTIEYGSSFSHNQTGTINDPAGVIENLSAVTNQTDLGISDYLLFTRIKFESLADDGVNLDIQNQLIG 1115          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A3D3RDW2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RDW2_9PLAN)

HSP 1 Score: 294 bits (752), Expect = 1.410e-89
Identity = 159/301 (52.82%), Postives = 211/301 (70.10%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G L++NNSV+G       P +V D +NN F+I   DQ     GSQ  G    S++ ISD+ +++NA++Q VNL GI+A G   N   VTATS++  LIPDP V Y +P  TGSLTFTPVA+Q G+A ITVTVEDGGLDGDL T EDNG FQRTF+V V     +   +I+L+VV SPT + +NG  + +P +Q+ V EWS++WVE+W+NTD   SQGIFS +LDL+Y + YT+AT IE+G  F+LNQ+G+++D SG +  L +ET   +LG+S +LLFARI+FESL +DGVDLD   Q IG
Sbjct:  291 GRLTSNNSVTGVLDLDISPGLVQDNINNTFFIRSQDQKTFRVGSQTDGFSPLSLNAISDVMLNENASEQIVNLVGISASGPDPNQLSVTATSSNTGLIPDPVVFYTSPDSTGSLTFTPVANQVGIATITVTVEDGGLDGDLGTTEDNGTFQRTFDVIV-----NTLVDIDLRVVGSPTLVESNGEIASLPANQNWVSEWSTYWVEIWMNTDSTSSQGIFSANLDLNYNTQYTSATTIEYGTGFTLNQTGSVNDLSGVVENLYSETNVNNLGISGYLLFARIQFESLVDDGVDLDTLNQTIG 586          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A2E2CAY2_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CAY2_9PLAN)

HSP 1 Score: 296 bits (758), Expect = 6.250e-88
Identity = 166/306 (54.25%), Postives = 214/306 (69.93%), Query Frame = 1
Query:    1 GPLSANNSVSGQNSRT-----DLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G +S +NS+ G    +      L Q +LD +NN +Y++  D+G+V+ GSQ  G     +DEISD+ I +N+ +QTV+LTGITAG  + N  RVTATS++P LIPDP V Y +   TGSLTFTP  +Q+G A ITVT+EDGGLDG LDT EDN   QRTF+V V     ++  +I+L+VVSSP  +  +G  S +P HQ  V EWSSFW+E+WV+T +  S GIFS SL L YQ+ Y + T IE+GP FSLNQ+GTI+D++G I  LSAET QT LG+S+ LLFARI+FESLAEDGV LDL  Q IG
Sbjct:  850 GIISTSNSIVGFEPSSYYLTAKLMQTILDDLNNTYYVTMKDEGRVWVGSQVDGFPPRILDEISDVIISENSTEQTVSLTGITAGSRSGNQLRVTATSSNPDLIPDPAVSYISLDTTGSLTFTPAENQTGTATITVTIEDGGLDGILDTTEDNFMSQRTFDVLV-----TIPVDIDLRVVSSPASVGPDGQTSILPAHQDRVDEWSSFWLEIWVSTTNIESPGIFSASLYLDYQTEYVSPTVIEYGPGFSLNQTGTINDSNGVIENLSAETNQTGLGISDFLLFARIKFESLAEDGVHLDLLNQLIG 1150          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A518A4I3_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4I3_9PLAN)

HSP 1 Score: 285 bits (728), Expect = 8.360e-84
Identity = 156/311 (50.16%), Postives = 222/311 (71.38%), Query Frame = 1
Query:    1 GPLSANNSVSG--QNSRTDLP-------QIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDA-SGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            G +SA NS+ G  +++ + +P       +I+ D +NN FY+   ++G+V+ GSQ  G++   +D+ISD++I++NA++Q + LTGI+A  ++  P RVTATSN+  LIPDP V Y +P +TGSLTFTPV +Q GVA ITVTVEDGGLDG+L ++EDN   QR+F+V V     +   +I+L++VSSPT + ANG  + +PDHQ D+ EWS+FW+E+WV T +  SQGIFS +L L Y+S Y +AT IEFG +F+ NQ GTI+D   G I   SAET  ++LG+S++LLFARI +ESLA+D V+LD+  Q IG
Sbjct:  867 GGISAINSIVGFEKSAYSGIPTPRPKELEIIQDDLNNTFYVFVKNEGRVWIGSQSDGILPLILDQISDVTINENASEQNIVLTGISAISSSAYPVRVTATSNNTGLIPDPVVFYTSPDDTGSLTFTPVTNQVGVATITVTVEDGGLDGNLSSVEDNFVSQRSFDVIV-----NALIDIDLRIVSSPTNVQANGEVAVLPDHQKDIHEWSTFWMEIWVRTTNVSSQGIFSLNLALEYESQYISATGIEFGSSFTQNQRGTINDGFRGVINNFSAETEVSNLGISDYLLFARIEYESLADDHVNLDIGNQLIG 1172          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A6I6AEC0_9PLAN (Uncharacterized protein n=2 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AEC0_9PLAN)

HSP 1 Score: 283 bits (724), Expect = 1.480e-83
Identity = 150/283 (53.00%), Postives = 200/283 (70.67%), Query Frame = 1
Query:   55 PQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            P IV   +NN FY  +   GKV+  SQG G    + D +SD+++ +NA++QTVNLTGI AGG   NP  +TATSN+ +LIPDP + Y +P  TGSL FTP+ DQ+G+A ITVTVEDGGLD +L T  DN   +RTF++ V     S   EI L+VV +PT ++++G A+ +PDHQS V EWSSF +E+WV T+   SQGIF+T LDL Y++   +AT IE+GP F+LNQSG+I+D  G++  L AET    LG+ ++LLFARI+F+SL +DGVDLDLD Q IG
Sbjct:  714 PYIVTHDLNNTFYSVFLSDGKVWVDSQGDGYPDLTFDPLSDMTVFENASEQTVNLTGIAAGGFGGNPVSITATSNNQSLIPDPIISYASPNSTGSLQFTPLPDQTGLATITVTVEDGGLDKNLATTFDNNILERTFDITV-----SNLLEIELRVVETPTSLDSDGAAAILPDHQSVVEEWSSFLLEIWVTTESTSSQGIFTTGLDLQYETEIISATMIEYGPGFALNQSGSINDTLGAVENLYAETTGEGLGIGDYLLFARIQFDSLTDDGVDLDLDGQSIG 991          
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Match: A0A2E7KHZ1_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KHZ1_9PLAN)

HSP 1 Score: 272 bits (696), Expect = 1.240e-79
Identity = 152/296 (51.35%), Postives = 199/296 (67.23%), Query Frame = 1
Query:   16 NNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLVQTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPDPKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFFQRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWSSFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGTIDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQIG 903
            NNS     +    P+I +D +N  FYI+Y++ G V  GSQ  G     +DEI+ L++  NA +Q VNL+GI A G    P RVTA+S++ +LIPDP V Y++P  TGSL+FTPV D +G A +TVTVEDGGLDGDL+T +DNGFFQRTF V V+    S     +++VV   T +++NG    +PD    + EWSSFW+E+WV+T    SQ I ST  DL+YQ+ Y T T+IE+G AF+LNQ GTI+DA G I  L+AET  T LG+S +LL ARI+FESL  DGVD+D  QQ IG
Sbjct:  735 NNSFRFATTNYAYPEITVDDINGRFYIAYNE-GIVLVGSQVDGFPGQMLDEIAPLALGINAGEQIVNLSGIMASGYNPLPLRVTASSDNTSLIPDPGVTYSSPDSTGSLSFTPVTDATGSATVTVTVEDGGLDGDLNTTDDNGFFQRTFVVTVE---NSTPVNFDMRVVGEATTVDSNGEVDVLPDSLDWIEEWSSFWLEIWVDTSSVDSQSILSTDFDLNYQTDYFTPTSIEYGAAFNLNQGGTINDAGGVIENLTAETDTTGLGISRYLLVARIQFESLPGDGVDIDYAQQSIG 1026          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82804.19350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PT33_9PLAN2.800e-18898.34Uncharacterized protein n=4 Tax=Gimesia chilikensi... [more]
A0A355GAL2_9PLAN1.030e-10658.80Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A3C0ADT5_9PLAN6.860e-10458.47Uncharacterized protein (Fragment) n=2 Tax=Plancto... [more]
UPI00118984673.380e-9054.15hypothetical protein n=1 Tax=Gimesia maris TaxID=1... [more]
A0A517RC11_9PLAN3.400e-9054.49Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A3D3RDW2_9PLAN1.410e-8952.82Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A2E2CAY2_9PLAN6.250e-8854.25Uncharacterized protein n=3 Tax=Planctomycetaceae ... [more]
A0A518A4I3_9PLAN8.360e-8450.16Uncharacterized protein n=1 Tax=Gimesia panareensi... [more]
A0A6I6AEC0_9PLAN1.480e-8353.00Uncharacterized protein n=2 Tax=Gimesia benthica T... [more]
A0A2E7KHZ1_9PLAN1.240e-7951.35Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82804contigM-pyrifera_M_contig82804:2..904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score228.8
Seed ortholog evalue3.4e-57
Seed eggNOG ortholog344747.PM8797T_31253
KEGG koko:K01173,ko:K07004,ko:K19233,ko:K21449
KEGG TC1.B.40,1.B.40.2
KEGG Pathwayko04210,map04210
Hectar predicted targeting categoryother localisation
EggNOG free text desc.neuron death in response to oxidative stress
EggNOG OGsCOG1864@1,COG1864@2,COG3391@1,COG3391@2,COG5295@1,COG5295@2
COG Functional cat.F
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03029
Exons1
Model size903
Cds size903
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.0787628-CDS-M-pyrifera_M_contig82804:1..9041622816735.0787628-CDS-M-pyrifera_M_contig82804:1..904Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82804 2..904 +
1692278147.4703555-CDS-M-pyrifera_M_contig82804:1..9041692278147.4703555-CDS-M-pyrifera_M_contig82804:1..904Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82804 2..904 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82804.19350.1prot_M-pyrifera_M_contig82804.19350.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82804 2..904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82804.19350.1

>prot_M-pyrifera_M_contig82804.19350.1 ID=prot_M-pyrifera_M_contig82804.19350.1|Name=mRNA_M-pyrifera_M_contig82804.19350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
GPLSANNSVSGQNSRTDLPQIVLDAVNNAFYISYSDQGKVYAGSQGTGLV
QTSIDEISDLSIDKNAAQQTVNLTGITAGGAATNPRRVTATSNHPALIPD
PKVIYNTPAETGSLTFTPVADQSGVAIITVTVEDGGLDGDLDTLEDNGFF
QRTFNVFVDYSGESVSAEINLQVVSSPTEINANGTASDIPDHQSDVLEWS
SFWVELWVNTDDNFSQGIFSTSLDLSYQSAYTTATAIEFGPAFSLNQSGT
IDDASGSITGLSAETAQTDLGVSEHLLFARIRFESLAEDGVDLDLDQQQI
G
back to top

mRNA from alignment at M-pyrifera_M_contig82804:2..904+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82804.19350.1 ID=mRNA_M-pyrifera_M_contig82804.19350.1|Name=mRNA_M-pyrifera_M_contig82804.19350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=903bp|location=Sequence derived from alignment at M-pyrifera_M_contig82804:2..904+ (Macrocystis pyrifera P11B4 male)
GGTCCTCTCTCTGCAAATAACAGCGTCTCGGGTCAGAATTCGAGGACCGA TCTTCCCCAGATCGTACTGGATGCAGTCAATAATGCGTTCTACATTTCTT ATTCGGATCAGGGAAAGGTCTATGCGGGATCGCAGGGAACGGGACTGGTT CAAACCAGCATCGATGAAATCTCTGATCTCAGTATCGATAAAAATGCAGC ACAACAGACAGTCAACCTTACAGGTATCACAGCAGGTGGTGCGGCAACGA ACCCCAGGCGGGTTACTGCAACCAGCAATCACCCGGCACTGATTCCCGAT CCGAAAGTAATTTATAACACGCCTGCGGAAACAGGCAGCCTGACGTTCAC ACCTGTAGCAGACCAGAGTGGTGTCGCCATCATCACCGTAACTGTCGAAG ATGGTGGACTTGATGGTGATCTGGATACCCTGGAGGATAATGGATTCTTT CAGCGCACTTTCAATGTATTTGTTGACTACTCTGGAGAATCAGTATCTGC TGAAATCAACCTGCAGGTTGTCAGCTCCCCGACAGAAATCAACGCGAATG GTACCGCCTCGGATATACCTGATCACCAGTCAGACGTCCTGGAATGGTCC TCGTTCTGGGTGGAACTCTGGGTGAATACGGATGACAATTTCAGCCAGGG CATCTTCTCCACGAGTCTCGACCTGAGCTATCAGAGTGCCTATACCACGG CAACTGCCATCGAGTTCGGCCCTGCCTTTTCCCTGAATCAGAGCGGCACC ATTGACGATGCCTCCGGGAGCATCACCGGTCTGTCTGCAGAGACAGCTCA GACCGATCTGGGAGTTTCCGAGCACCTGCTCTTTGCCCGCATCAGATTTG AATCGCTGGCCGAAGATGGAGTCGACCTGGATCTGGACCAGCAGCAGATC GGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig82804:2..904+

>mRNA_M-pyrifera_M_contig82804.19350.1 ID=mRNA_M-pyrifera_M_contig82804.19350.1|Name=mRNA_M-pyrifera_M_contig82804.19350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1806bp|location=Sequence derived from alignment at M-pyrifera_M_contig82804:2..904+ (Macrocystis pyrifera P11B4 male)
GGTCCTCTCTCTGCAAATAACAGCGTCTCGGGTCAGAATTCGAGGACCGA
TCTTCCCCAGATCGTACTGGATGCAGTCAATAATGCGTTCTACATTTCTT
ATTCGGATCAGGGAAAGGTCTATGCGGGATCGCAGGGAACGGGACTGGTT
CAAACCAGCATCGATGAAATCTCTGATCTCAGTATCGATAAAAATGCAGC
ACAACAGACAGTCAACCTTACAGGTATCACAGCAGGTGGTGCGGCAACGA
ACCCCAGGCGGGTTACTGCAACCAGCAATCACCCGGCACTGATTCCCGAT
CCGAAAGTAATTTATAACACGCCTGCGGAAACAGGCAGCCTGACGTTCAC
ACCTGTAGCAGACCAGAGTGGTGTCGCCATCATCACCGTAACTGTCGAAG
ATGGTGGACTTGATGGTGATCTGGATACCCTGGAGGATAATGGATTCTTT
CAGCGCACTTTCAATGTATTTGTTGACTACTCTGGAGAATCAGTATCTGC
TGAAATCAACCTGCAGGTTGTCAGCTCCCCGACAGAAATCAACGCGAATG
GTACCGCCTCGGATATACCTGATCACCAGTCAGACGTCCTGGAATGGTCC
TCGTTCTGGGTGGAACTCTGGGTGAATACGGATGACAATTTCAGCCAGGG
CATCTTCTCCACGAGTCTCGACCTGAGCTATCAGAGTGCCTATACCACGG
CAACTGCCATCGAGTTCGGCCCTGCCTTTTCCCTGAATCAGAGCGGCACC
ATTGACGATGCCTCCGGGAGCATCACCGGTCTGTCTGCAGAGACAGCTCA
GACCGATCTGGGAGTTTCCGAGCACCTGCTCTTTGCCCGCATCAGATTTG
AATCGCTGGCCGAAGATGGAGTCGACCTGGATCTGGACCAGCAGCAGATC
GGTGGTCCTCTCTCTGCAAATAACAGCGTCTCGGGTCAGAATTCGAGGAC
CGATCTTCCCCAGATCGTACTGGATGCAGTCAATAATGCGTTCTACATTT
CTTATTCGGATCAGGGAAAGGTCTATGCGGGATCGCAGGGAACGGGACTG
GTTCAAACCAGCATCGATGAAATCTCTGATCTCAGTATCGATAAAAATGC
AGCACAACAGACAGTCAACCTTACAGGTATCACAGCAGGTGGTGCGGCAA
CGAACCCCAGGCGGGTTACTGCAACCAGCAATCACCCGGCACTGATTCCC
GATCCGAAAGTAATTTATAACACGCCTGCGGAAACAGGCAGCCTGACGTT
CACACCTGTAGCAGACCAGAGTGGTGTCGCCATCATCACCGTAACTGTCG
AAGATGGTGGACTTGATGGTGATCTGGATACCCTGGAGGATAATGGATTC
TTTCAGCGCACTTTCAATGTATTTGTTGACTACTCTGGAGAATCAGTATC
TGCTGAAATCAACCTGCAGGTTGTCAGCTCCCCGACAGAAATCAACGCGA
ATGGTACCGCCTCGGATATACCTGATCACCAGTCAGACGTCCTGGAATGG
TCCTCGTTCTGGGTGGAACTCTGGGTGAATACGGATGACAATTTCAGCCA
GGGCATCTTCTCCACGAGTCTCGACCTGAGCTATCAGAGTGCCTATACCA
CGGCAACTGCCATCGAGTTCGGCCCTGCCTTTTCCCTGAATCAGAGCGGC
ACCATTGACGATGCCTCCGGGAGCATCACCGGTCTGTCTGCAGAGACAGC
TCAGACCGATCTGGGAGTTTCCGAGCACCTGCTCTTTGCCCGCATCAGAT
TTGAATCGCTGGCCGAAGATGGAGTCGACCTGGATCTGGACCAGCAGCAG
ATCGGT
back to top