prot_M-pyrifera_M_contig82758.19339.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82758.19339.1
Unique Nameprot_M-pyrifera_M_contig82758.19339.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length201
Homology
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BLAST of mRNA_M-pyrifera_M_contig82758.19339.1 vs. uniprot
Match: A0A1F3IMT2_9BACT (CHAT domain-containing protein n=1 Tax=Bacteroidetes bacterium GWF2_33_16 TaxID=1797341 RepID=A0A1F3IMT2_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 9.510e-5
Identity = 47/181 (25.97%), Postives = 82/181 (45.30%), Query Frame = 0 
Query:    2 FYRAIEVNKQMKNDVQIAHLTLDIGRLFYENRAFDKALKYYKKALELSKKIDNEELLSMSLSNLA-ISSRKMGMEVEAIHYANQAIGLVNDLESSEMLVSLHLEKGMCFYQTENWNRARDHFFESLTKEINVDDSRHLARVYVNLGHYYNLKREYDNAVNXYDMAMEQGANLVGVDEANYA 181
            F ++ +  + + + + +A L +++G + Y    ++KA+KYY KA EL K +D++  L+    N A I   +   +     Y N  I L  +  S   + S++   G+ +  T N  +A ++F ESL  +   D    L   + N+   Y+     D A   Y  A+E     VG     YA
Sbjct:   60 FLKSFQYYQSINSSIHLAPLNVNLGIIQYHYGNYEKAMKYYNKAEELYKNLDDKNQLTYVYINKANIFEIQKDYKKAEQFYLNALIILNQNKGSKLTIASVYNNLGIVYRNTGNNEKAIEYFLESLKLK---DVHERLFTPFGNIALSYDQLNRIDEAEIYYLKALENIEQTVGNKNRWYA 237
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82758.19339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1F3IMT2_9BACT9.510e-525.97CHAT domain-containing protein n=1 Tax=Bacteroidet... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 19..52
e-value: 0.12
score: 21.5
coord: 59..92
e-value: 21.0
score: 12.1
coord: 139..172
e-value: 0.0034
score: 26.6
coord: 99..132
e-value: 12.0
score: 14.4
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 139..163
e-value: 0.0037
score: 17.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 99..132
score: 5.694
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 19..52
score: 10.296
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 139..172
score: 9.794
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 100..201
e-value: 1.1E-11
score: 46.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..99
e-value: 4.1E-16
score: 61.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..199
NoneNo IPR availablePFAMPF13424TPR_12coord: 19..86
e-value: 2.1E-8
score: 34.3
NoneNo IPR availablePANTHERPTHR46630FAMILY NOT NAMEDcoord: 108..189
coord: 4..133
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..201
score: 16.84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82758contigM-pyrifera_M_contig82758:186..902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82758.19339.1mRNA_M-pyrifera_M_contig82758.19339.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82758 186..902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82758.19339.1 ID=prot_M-pyrifera_M_contig82758.19339.1|Name=mRNA_M-pyrifera_M_contig82758.19339.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
SFYRAIEVNKQMKNDVQIAHLTLDIGRLFYENRAFDKALKYYKKALELSK
KIDNEELLSMSLSNLAISSRKMGMEVEAIHYANQAIGLVNDLESSEMLVS
LHLEKGMCFYQTENWNRARDHFFESLTKEINVDDSRHLARVYVNLGHYYN
LKREYDNAVNYYDMAMEQGANLVGVDEANYAYDSLTTYFIRTEDFKSALT
Y
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom