mRNA_M-pyrifera_M_contig8272.19334.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 277 bits (708), Expect = 1.470e-89 Identity = 126/173 (72.83%), Postives = 149/173 (86.13%), Query Frame = 1 Query: 1 GSVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQV 519 G+ + DS+RTI+GFST AQEKL+GEKWFDVY AYW G++DYAD FT+ ACNGT F AS TR E CVKGAQYQN+WMYVIHELEDAI+DC+ G+L ANDGGPHAWDEGW FYAGSLEGT+G GDGVM++ALA+KRC NFATCT DDDGS+ TG++ VN+D+LEL++EGQV Sbjct: 74 GNSEKTDSIRTIQGFSTGAQEKLSGEKWFDVYEAYW-GSTDYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHELEDAIEDCDIGNLNANDGGPHAWDEGWGFYAGSLEGTEGTGDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQV 245
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 259 bits (661), Expect = 8.430e-77 Identity = 120/174 (68.97%), Postives = 143/174 (82.18%), Query Frame = 1 Query: 1 GSVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTD--GEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQ 516 G+ + DS RT++GFST AQEKLTGE FD++ A+W G+ DYAD +T+ AC GTGTF GAS +TR E C+KGAQYQNIWMYV HEL DA+ DCENGDL+ANDGGPHAWDEGWAFYAGSLEGTD G GDG M++ALA+KRC NF TCTGD DGS+ TG SA+N++LL L++ GQ Sbjct: 83 GNSEKTDSTRTVQGFSTGAQEKLTGEVTFDIWEAFW-GSPDYADQYTSGACLGTGTFAGASNLTRSECCLKGAQYQNIWMYVTHELYDAVGDCENGDLSANDGGPHAWDEGWAFYAGSLEGTDVGGTGDGQMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLTLWETGQ 255
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.890e-74 Identity = 114/183 (62.30%), Postives = 140/183 (76.50%), Query Frame = 1 Query: 1 GSVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCE---------NGDLTANDGGPHAWDEGWAFYAGSLEGT--DGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQ 516 G+ + +RT++GFST A EKLTGE FDV+ AYW G+ DYAD FT++AC GTG F GA VTR E C+KGAQYQN+WMYV HEL DA++DCE GDL+ANDGGPHAWDEGWAFY GSLEGT G GDG M++ALA+KRC NF TCTGD DGS+ TG SA+N++LL+L+++G+ Sbjct: 238 GNSEKSTEIRTVQGFSTGADEKLTGEATFDVWEAYW-GSPDYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVEDCEIGGGCVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGK 419
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 212 bits (540), Expect = 6.130e-61 Identity = 102/172 (59.30%), Postives = 123/172 (71.51%), Query Frame = 1 Query: 4 SVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDG--EGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEG 513 S+ S+D RTI+ F T A+EKL GEKWF+VY AYW G DYAD FT++AC GTG++ V R E+C KGAQYQN+WMYVIHE+E+A+ C GD A DGGPH WDE WAFYAGSLEG G +GDG M++ALA KRC NF TC G D TG++A+N D+LEL G Sbjct: 76 SMYSEDGFRTIQAFWTDAEEKLGGEKWFEVYQAYW-GAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDNGAADGGPHYWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADG---ITGTAAINDDILELIGAG 243
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.310e-60 Identity = 102/166 (61.45%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 25 LRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTAN-DGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQV 519 LRT++GFST A KL+GE +++Y AYW G DYAD F T+A +GTG ++ +S++ R+E KGA YQN WMYVIHELEDA+ DC+ G N D HAWDEGWAFYAGSLE DG G GV ++ALA+KRC NF TCTGDDDG TG SAVNA+LL L+QEGQ+ Sbjct: 30 LRTLQGFSTEAGTKLSGEDLYELYRAYW-GADDYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHELEDAVLDCQAGTPMNNEDPAVHAWDEGWAFYAGSLE--DGTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQL 192
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 207 bits (526), Expect = 3.530e-60 Identity = 96/173 (55.49%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 4 SVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEF-TGSSAVNADLLELFQEGQV 519 S+KS +RTI+GFSTSA K+ GE ++ +Y YW G++ YAD FT++AC GTG + ++ R E C KGA YQN+WMYVIHE+EDAI DC++ DLT ND G AWDE AFY GSLEG DG+GDG ++++LADKRC NF TCTGD S +G +AVN +++LF++G V Sbjct: 304 SLKSSGIVRTIKGFSTSAATKMAGEPFYGIYRTYW-GDAAYADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHEMEDAIGDCKSSDLTDNDSGVVAWDEAVAFYTGSLEGVDGKGDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSV 475
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7S2XA87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA) HSP 1 Score: 182 bits (461), Expect = 1.790e-52 Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 4 SVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNS----DYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQ 516 SVK + RTI+GFST A K+ G KW +VYA Y +YAD+FT+ AC G G F G +V ++E C KG+ YQN+WMYV+ E++DAIDDC GDL+ N HAWDE AFY GSLEGTDG G GV+ +ALA+KR F T D GS+ VNA++++LF++GQ Sbjct: 64 SVKGSGANRTIQGFSTGAVPKMVGSKWMEVYARYHGTQGAPMYNYADVFTSDACLGQGQFAGVDQVAKKELCKKGSAYQNVWMYVVWEMQDAIDDCLGGDLSNNGAAVHAWDEAVAFYVGSLEGTDGSGAGVLGYALAEKRAPQFGTANSD-------GSAIVNAEVMDLFKDGQ 231
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.520e-52 Identity = 84/155 (54.19%), Postives = 106/155 (68.39%), Query Frame = 1 Query: 55 AQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEG--DGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEG 513 A KL GE+ +++Y AYW G+ YAD +A +GTG + GA +V REE K A Y WMYVIHE+EDAI+DC GD+T+ND HAWDE W FY+G+LEG+ EG DGV+ + LA+KRC NF TC GDDDG TG S VN LL L+++G Sbjct: 1 AGTKLAGEELYELYRAYW-GSDSYADDMVVAALDGTGIYAGADDVVREEIASKTAAYSVTWMYVIHEMEDAINDCNEGDITSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDGVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQG 154
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 172 bits (435), Expect = 7.520e-47 Identity = 87/164 (53.05%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 25 LRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQ 516 +RT++GF+TS + + Y+ G++ YAD F +A GTG F G V+REES KG+ Y N WMYV ELEDAIDDC+ G L ND G HAWDE WAFYAGSLEG DG G GV +ALADKRC +F TCT +G SAVNA +L+LF++GQ Sbjct: 70 MRTLQGFATSISAGKADAALYQRFVQYY-GSATYADDFVMAALQGTGVFAGKPAVSREESAAKGSAYGNSWMYVQLELEDAIDDCKAGALADNDRGVHAWDEAWAFYAGSLEGVDGSGSGVQPYALADKRCADFNTCTS-------SGGSAVNAAVLQLFKDGQ 225
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Match: A0A7S1IQD7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQD7_9EUGL) HSP 1 Score: 172 bits (435), Expect = 1.110e-46 Identity = 87/164 (53.05%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 25 LRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSACNGTGTFLGASEVTREESCVKGAQYQNIWMYVIHELEDAIDDCENGDLTANDGGPHAWDEGWAFYAGSLEGTDGEGDGVMIHALADKRCLNFATCTGDDDGSEFTGSSAVNADLLELFQEGQ 516 +RT++GF+TS + + Y+ G++ YAD F +A GTG F G V+REES KG+ Y N WMYV ELEDAIDDC+ G L ND G HAWDE WAFYAGSLEG DG G GV +ALADKRC +F TCT +G SAVNA +L+LF++GQ Sbjct: 70 MRTLQGFATSISAGKADAALYQRFVQYY-GSATYADDFVMAALQGTGVFAGKPAVSREESAAKGSAYGNSWMYVQLELEDAIDDCKAGALADNDRGVHAWDEAWAFYAGSLEGVDGSGSGVQPYALADKRCADFNTCTS-------SGGSAVNAAVLQLFKDGQ 225 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8272.19334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8272.19334.1 >prot_M-pyrifera_M_contig8272.19334.1 ID=prot_M-pyrifera_M_contig8272.19334.1|Name=mRNA_M-pyrifera_M_contig8272.19334.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp GSVKSDDSLRTIRGFSTSAQEKLTGEKWFDVYAAYWDGNSDYADLFTTSAback to top mRNA from alignment at M-pyrifera_M_contig8272:9118..12013+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8272.19334.1 ID=mRNA_M-pyrifera_M_contig8272.19334.1|Name=mRNA_M-pyrifera_M_contig8272.19334.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2896bp|location=Sequence derived from alignment at M-pyrifera_M_contig8272:9118..12013+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8272:9118..12013+ >mRNA_M-pyrifera_M_contig8272.19334.1 ID=mRNA_M-pyrifera_M_contig8272.19334.1|Name=mRNA_M-pyrifera_M_contig8272.19334.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig8272:9118..12013+ (Macrocystis pyrifera P11B4 male)back to top |