prot_M-pyrifera_M_contig82700.19331.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82700.19331.1
Unique Nameprot_M-pyrifera_M_contig82700.19331.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
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BLAST of mRNA_M-pyrifera_M_contig82700.19331.1 vs. uniprot
Match: A0A7S1C2H6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2H6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.710e-14
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 0 
Query:    8 SPHLRNLCLIAAATTFLGRVLARRMFRVDLEL----GGTFSLLLGTFWLLWYHFFVVERPLLEFTRTLGNLHTLSRLSPRLTFRPHPLFNPHLQTVLLNALNALDAYLQPYSGYRRQTIKSADG-NDVHLD 133
            S H+RNL  I+   + +    ARR+  +   L     G F++    FW L+Y +FVVERP++ F R++ N+  + R   R  +     FN H QTVL N LN LD +L P++ YRR+ + + D  N V LD
Sbjct:   61 SKHVRNLGGISLVLSLVTHRAARRLLFLPRGLRDGLSGAFTMWFLVFWFLYYRYFVVERPVILFQRSMWNMAIMERFRVRRFYPVFWGFNFHAQTVLCNGLNVLDEWLTPFAKYRRELLPAHDPPNHVVLD 191
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82700.19331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1C2H6_9STRA4.710e-1437.40Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..38
NoneNo IPR availableTMHMMTMhelixcoord: 41..60
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82700contigM-pyrifera_M_contig82700:17..427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82700.19331.1mRNA_M-pyrifera_M_contig82700.19331.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82700 17..427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82700.19331.1 ID=prot_M-pyrifera_M_contig82700.19331.1|Name=mRNA_M-pyrifera_M_contig82700.19331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
SILVSVRSPHLRNLCLIAAATTFLGRVLARRMFRVDLELGGTFSLLLGTF
WLLWYHFFVVERPLLEFTRTLGNLHTLSRLSPRLTFRPHPLFNPHLQTVL
LNALNALDAYLQPYSGYRRQTIKSADGNDVHLDWVSG
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