prot_M-pyrifera_M_contig82694.19326.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82694.19326.1
Unique Nameprot_M-pyrifera_M_contig82694.19326.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length163
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig82694.19326.1 vs. uniprot
Match: A0A8H7VQF9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VQF9_9FUNG)

HSP 1 Score: 55.1 bits (131), Expect = 5.840e-6
Identity = 35/144 (24.31%), Postives = 70/144 (48.61%), Query Frame = 0 
Query:    9 EGDAVTEVELSTVEPMEDDLGMSTKFSRRPVLG-KALLSASLFEEAAAEVVSVPNDVKVFSLQLMPVMPYLRLNVESTGGSVTVDFHGGLDSFESFDCKKELSFTYHMESFRQAVQGLGFAKDTLLRVNEIGSFALTHRLRDAH 151
            E D  T   L T+EP  ++L +S   +  P L  +A++ +S  +EA +++       +  ++   P  P   L  E   G+  +++    +SF SF C +E +++YH        + L  + +  LRV+  G  ++  R++++H
Sbjct:  124 ENDVSTHCRLVTLEPDSENLELS--LNDEPNLSQRAIMKSSWLKEAMSDL---DKSCEKINMTFSPTDPCFSLTGEGNNGTFEMEYPEHSESFISFHCNEEATYSYHFSHIVYCNKALDQSDEVSLRVSRDGVLSMLFRIQESH 262
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82694.19326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8H7VQF9_9FUNG5.840e-624.31Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003021Rad1/Rec1/Rad17PFAMPF02144Rad1coord: 3..142
e-value: 1.7E-12
score: 47.0
IPR003021Rad1/Rec1/Rad17PANTHERPTHR10870CELL CYCLE CHECKPOINT PROTEIN RAD1coord: 3..163
NoneNo IPR availableGENE3D3.70.10.10coord: 1..163
e-value: 2.3E-24
score: 87.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82694contigM-pyrifera_M_contig82694:244..732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82694.19326.1mRNA_M-pyrifera_M_contig82694.19326.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82694 244..732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82694.19326.1 ID=prot_M-pyrifera_M_contig82694.19326.1|Name=mRNA_M-pyrifera_M_contig82694.19326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
SLLKLIVAEGDAVTEVELSTVEPMEDDLGMSTKFSRRPVLGKALLSASLF
EEAAAEVVSVPNDVKVFSLQLMPVMPYLRLNVESTGGSVTVDFHGGLDSF
ESFDCKKELSFTYHMESFRQAVQGLGFAKDTLLRVNEIGSFALTHRLRDA
HGSAALVSFFLSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003021Rad1_Rec1_Rad17