prot_M-pyrifera_M_contig82685.19323.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82685.19323.1
Unique Nameprot_M-pyrifera_M_contig82685.19323.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82685.19323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 2..35
e-value: 25.0
score: 11.4
coord: 36..69
e-value: 0.88
score: 18.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 36..69
score: 7.788
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 2..35
score: 8.319
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..101
e-value: 1.1E-14
score: 56.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..96
NoneNo IPR availablePFAMPF14559TPR_19coord: 12..68
e-value: 1.2E-5
score: 25.7
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..69
score: 14.852

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82685contigM-pyrifera_M_contig82685:186..488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82685.19323.1mRNA_M-pyrifera_M_contig82685.19323.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82685 186..488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82685.19323.1 ID=prot_M-pyrifera_M_contig82685.19323.1|Name=mRNA_M-pyrifera_M_contig82685.19323.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
DAAFQEKVGHRLFSENQPDDALMYYEIAMDLAPEDTDAYHNAACCYHMLG
RNDEAQTTFLQGIALTPTAAIHIEYAHFLIKQAAYGEALAHIIASEAYEP
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom