mRNA_M-pyrifera_M_contig8264.19317.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8264.19317.1
Unique NamemRNA_M-pyrifera_M_contig8264.19317.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: D7FYW5_ECTSI (Flavine reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW5_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 1.260e-133
Identity = 209/251 (83.27%), Postives = 225/251 (89.64%), Query Frame = 1
Query:    1 SCVRMMASNIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEMA 753
            SCV MMA NIAVFGGNGLTGSEVVYQAL RG KVTAFCRDPSKL  P G G   AGTPL+N+NLKTVQ G+VT+LDDVRKVF++G I+GV +ALGGKT DVG TMLTDGT+NIITAMKE GV KVA VTSIG GDSE QAPFFFKVLMYTAMKSIF DKN+QE LFF GPG+DLDFT+VRPGGLTV+PPTG INVIKGEAGSISRADVADF++GAISD+DFPYLKQAPCISSVGGTSWVKDRS AARGEMA
Sbjct:   34 SCVTMMAGNIAVFGGNGLTGSEVVYQALQRGDKVTAFCRDPSKLVYPPGVGVTKAGTPLSNENLKTVQ-GTVTDLDDVRKVFSNGPITGVAIALGGKTKDVGTTMLTDGTSNIITAMKEKGVKKVATVTSIGTGDSENQAPFFFKVLMYTAMKSIFADKNEQEKLFFDGPGQDLDFTIVRPGGLTVEPPTGVINVIKGEAGSISRADVADFILGAISDKDFPYLKQAPCISSVGGTSWVKDRSGAARGEMA 283          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A836C907_9STRA (Flavine reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C907_9STRA)

HSP 1 Score: 349 bits (896), Expect = 4.010e-111
Identity = 180/242 (74.38%), Postives = 200/242 (82.64%), Query Frame = 1
Query:   25 NIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEM 750
            +IAVFG +GL GSEV YQAL RG  V AF RDPSKL VPAGSGG  AG PL +D LK VQ GSV   DDV K FA GD++GVVVALGGKT DVGKTMLTDGT+NII AMK +GV ++A VTSIGAGDSE QAPFFFKVLM+T MK+IFEDKN QE LF +GPG DL+FT+VRPGGLTV+PPTG INVI GEAGSISRADVADF +GA+ +E FPYL++ PCISSVGGTSW KDRS AARG M
Sbjct:   43 SIAVFGASGLLGSEVTYQALQRGEDVIAFLRDPSKLVVPAGSGGPDAGKPLKSDKLKVVQ-GSVVSYDDVTKAFAGGDVTGVVVALGGKTKDVGKTMLTDGTSNIIKAMKANGVKRIAAVTSIGAGDSENQAPFFFKVLMFTVMKNIFEDKNNQEALFTRGPGSDLEFTIVRPGGLTVEPPTGVINVISGEAGSISRADVADFCLGAVLEEGFPYLRKTPCISSVGGTSWTKDRSAAARGGM 283          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A835Z045_9STRA (Flavine reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z045_9STRA)

HSP 1 Score: 316 bits (810), Expect = 5.560e-99
Identity = 166/243 (68.31%), Postives = 192/243 (79.01%), Query Frame = 1
Query:   28 IAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFK--GPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEM 750
            IAVFG +GL GSEV YQAL +G KV AF RDPSKL+VP GSGG  AG PL  DNLK VQ GSVT L+DV K FADGD++ VVV+LGG+T+ VGKTMLTDGTTNII AMK   V ++AVVTSIG GDS  QAPF F++LM T M+ +  DKN QE LF    G GKDLD+ +VRPGGLTV+ PTG INVI G+AGSI+RADVADF++GA+ D  FPYL++APCISSVGGT W KDRS +ARGEM
Sbjct:    2 IAVFGASGLLGSEVTYQALKQGHKVVAFVRDPSKLTVPKGSGGDEAGKPLTGDNLKIVQ-GSVTNLEDVDKAFADGDVTSVVVSLGGRTSKVGKTMLTDGTTNIINAMKAHNVKRIAVVTSIGVGDSYSQAPFAFRMLMNTVMRVMIADKNNQEALFTSADGIGKDLDYVIVRPGGLTVEKPTGVINVIDGQAGSIARADVADFILGAVLDNAFPYLRKAPCISSVGGTGWTKDRSASARGEM 243          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S4D495_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D495_HETAK)

HSP 1 Score: 317 bits (811), Expect = 1.030e-98
Identity = 160/233 (68.67%), Postives = 187/233 (80.26%), Query Frame = 1
Query:   22 SNIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVK 720
            ++IAVFGG+G TG+E VYQAL++G KVT   RDPS++ +P GSGGA AG+P +ND L  +Q G VT   DV KVFA GDISGVVVALGGKT DVG TMLTDGT+N+I AMKESG  +V+VVTSIGAGDSEKQAP FFK LMYT M+ IF DKN QE LF  GPG DL++ +VRPGGL V PPTG INVI G+AGSI RADVA FL+GA++D +F +L+Q PCISSVGGT WVK
Sbjct:   24 NHIAVFGGSGKTGAECVYQALEQGYKVTVLARDPSRVCIPEGSGGAKAGSPFSNDKLNVIQ-GDVTNAADVSKVFAGGDISGVVVALGGKTKDVGPTMLTDGTSNVIKAMKESGTKRVSVVTSIGAGDSEKQAPIFFKALMYTVMRGIFADKNNQEGLFLNGPGSDLEYCIVRPGGLGVGPPTGVINVIDGKAGSIQRADVATFLLGALADPNFEHLRQTPCISSVGGTGWVK 255          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A0G4GNW0_9ALVE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GNW0_9ALVE)

HSP 1 Score: 312 bits (800), Expect = 5.310e-97
Identity = 159/235 (67.66%), Postives = 185/235 (78.72%), Query Frame = 1
Query:   28 IAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSK 732
            IA+FG +G TG EV Y+ALD+G KV AF RDP+KL +P GSGG  AG PL ND L  V QG VT L+DV+KVF  GD+ GVV+ALGGKT DVGK+MLT GT N+I AM+E GV +VAVV+SIGAGDSEKQAP FFKVLMYT MK IF DKN QE LF  GPG DL++ +VRPGGL V P TG INVI GEAGSI RADVADF +GA+ ++DF Y+++APCISSVGGT WVK + K
Sbjct:   36 IAIFGASGKTGQEVAYRALDQGCKVAAFVRDPAKLCIPQGSGGDLAGQPLKNDGL-AVFQGDVTNLNDVKKVFEKGDVDGVVIALGGKTKDVGKSMLTAGTKNVIEAMREKGVKRVAVVSSIGAGDSEKQAPLFFKVLMYTVMKDIFADKNNQERLFINGPGSDLEWCLVRPGGLGVGPATGVINVIDGEAGSIMRADVADFCLGAVLEKDFEYVRKAPCISSVGGTGWVKQKGK 269          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S4AAM9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAM9_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.370e-96
Identity = 164/241 (68.05%), Postives = 190/241 (78.84%), Query Frame = 1
Query:   28 IAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEM 750
            IAVFG +GLTGSE V+QAL+ G KV    R+PS L VPAGSGGA A  PL N+NL T+  G VT+  DV KVF +G++ GV+VALGGKTADVG+TMLTDGT N+I AMKE GV ++AVVTSIGAGDSE QAPFFFKVLM+TAMK IF DKN QE+         L++ +VRPGGLTVDPPTG +NVI GEAGSI RADVA F + A+  +DFPY+ +APCISSVGGTSW KDRSKAARGEM
Sbjct:   49 IAVFGASGLTGSEAVFQALNEGDKVIGLTRNPSNLKVPAGSGGADADKPLQNENL-TMIAGDVTKKGDVDKVFENGEVDGVIVALGGKTADVGETMLTDGTNNVIAAMKEKGVKRLAVVTSIGAGDSENQAPFFFKVLMWTAMKKIFLDKNSQEEATVNSG---LEYCIVRPGGLTVDPPTGVVNVIDGEAGSIPRADVAQFCLDAVRMDDFPYIGKAPCISSVGGTSWTKDRSKAARGEM 285          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S1TBA0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1TBA0_9CHLO)

HSP 1 Score: 308 bits (789), Expect = 2.460e-95
Identity = 162/240 (67.50%), Postives = 188/240 (78.33%), Query Frame = 1
Query:    7 VRMMASNIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDR 726
            +++ A+ IAV GG G TGSE VYQAL+ G +V    R P+ L VP GSGGA AG+ L ++ L TV QG+VT   DV KV +D D+ GVV+ALGGKT DVG TMLTDGT  +I AM+  GV +V+VVTSIGAGDSEKQAPFFFKVLM+T MKSIF DKN QEDLF  GPGKDL++ +VRPGGL  DPPTG INVI GEAGSI RADVA F +GA++ +DFPYL QAPCISSVGGTSWVKDR
Sbjct:   35 LQVCAAKIAVIGGTGGTGSECVYQALEAGDEVVTLVRTPANLVVPPGSGGAKAGSKLESERL-TVVQGNVTVQSDVDKVISD-DVDGVVIALGGKTKDVGPTMLTDGTRCVINAMQAKGVKRVSVVTSIGAGDSEKQAPFFFKVLMFTVMKSIFNDKNNQEDLFISGPGKDLEYCIVRPGGLLTDPPTGVINVIDGEAGSIPRADVAAFCLGALTQKDFPYLGQAPCISSVGGTSWVKDR 272          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S2Y077_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y077_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.810e-95
Identity = 160/249 (64.26%), Postives = 187/249 (75.10%), Query Frame = 1
Query:    1 SCVRMMASNIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFAD-GDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARG 744
            SC  +  S +A+FGG G TGSE VYQAL++G  V    R PSK+ VP GSGG+ AG PL N  L TV QGSVTE  DV KVFA   D  G ++ALGGKT DVGKTMLTDG++N+I +M   G+ +V+VVTSIGAGDSEKQAP FFK LMYT MK IF DKN QE LF +G GKDLD+ +VRPGGL V PPTG INVI+GEAGSI+RADVA F +GAI+D +FPY+K+ PCISSVGGTSWVK +     G
Sbjct:   33 SCNTLQMSAVAIFGGTGKTGSECVYQALEQGLDVVVLARSPSKMVVPEGSGGSEAGKPLENPKL-TVLQGSVTEAADVEKVFASRDDFIGSIIALGGKTKDVGKTMLTDGSSNVIDSMLAKGIKRVSVVTSIGAGDSEKQAPLFFKALMYTVMKGIFTDKNNQEKLFLEGKGKDLDYCIVRPGGLGVGPPTGVINVIEGEAGSIARADVAAFCLGAITDPEFPYIKKTPCISSVGGTSWVKSKEAGFDG 280          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S3T4L8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T4L8_9SPIT)

HSP 1 Score: 305 bits (780), Expect = 4.400e-94
Identity = 158/241 (65.56%), Postives = 189/241 (78.42%), Query Frame = 1
Query:   25 NIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGE 747
            ++AVFG  G  GSEV +QAL +G  V A  RD S+L+VP GSGGAAAGTPL N+ L TV +G+VT   DV KVF  GD++GVVVALGGK++DVG+TMLTDGTTNII    ++GV +++VVTSIGAGDSE QAPFFFKVLM+T MK IF DKN QE+LFF GPGKDL+FT+VRPGGL+ +PP G INVIKGEAGSISRADVA F + A+   DF YL+ APCISS  GTSWVK++     G+
Sbjct:   32 SLAVFGATGGVGSEVAFQALGKGEVVRALVRDKSRLTVPPGSGGAAAGTPLVNEAL-TVFEGTVTSAADVAKVFESGDVTGVVVALGGKSSDVGETMLTDGTTNIINECIKNGVKRISVVTSIGAGDSENQAPFFFKVLMWTVMKKIFADKNNQEELFFSGPGKDLEFTIVRPGGLSNNPPNGIINVIKGEAGSISRADVAAFCLDAVQKPDFAYLRSAPCISSDKGTSWVKEKGMTIGGK 271          
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Match: A0A7S0LSW5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSW5_9EUKA)

HSP 1 Score: 303 bits (776), Expect = 2.390e-93
Identity = 156/242 (64.46%), Postives = 189/242 (78.10%), Query Frame = 1
Query:   25 NIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAAAGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKTMLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKSIFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSISRADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEM 750
            +IAVFG +G TGSE V+QAL RG KV    R+P++L VPAGSGGAA+ +PL +D+L+ +Q G VT   DV KVF  GD+SGVVVALGGKTADVG++MLTDGT N+I A K  G+ ++AVVTSIGAGDSE QAPFFFKVLM T M+ IFEDKN QE LF  GPG DL+FTVVRPGGL+++PP G +NVIKGEAGSISRADVA F + A++  ++PY+ Q PCISS  GTSWVKD+     G +
Sbjct:   42 SIAVFGASGGTGSEAVFQALGRGQKVNCLVRNPARLLVPAGSGGAASESPLRDDSLRVIQ-GDVTNPVDVAKVFELGDVSGVVVALGGKTADVGESMLTDGTRNVIEACKAGGIKRIAVVTSIGAGDSENQAPFFFKVLMMTVMRKIFEDKNNQEKLFLDGPGSDLEFTVVRPGGLSMEPPNGIVNVIKGEAGSISRADVAAFCLDAVTKAEWPYIGQTPCISSDKGTSWVKDKGMPVGGNI 282          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8264.19317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYW5_ECTSI1.260e-13383.27Flavine reductase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836C907_9STRA4.010e-11174.38Flavine reductase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A835Z045_9STRA5.560e-9968.31Flavine reductase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4D495_HETAK1.030e-9868.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A0G4GNW0_9ALVE5.310e-9767.66NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A7S4AAM9_9STRA1.370e-9668.05Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1TBA0_9CHLO2.460e-9567.50Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S2Y077_9STRA2.810e-9564.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3T4L8_9SPIT4.400e-9465.56Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S0LSW5_9EUKA2.390e-9364.46Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8264contigM-pyrifera_M_contig8264:4282..10998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.0
Seed ortholog evalue1.3e-110
Seed eggNOG ortholog2880.D7FYW5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.NAD(P)H-binding
EggNOG OGs29JK8@1,2RSUR@2759
Ec32 ortholog descriptionFlavine reductase
Ec32 orthologEc-19_002720.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2442
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.1759768-UTR-M-pyrifera_M_contig8264:4281..42931622816733.1759768-UTR-M-pyrifera_M_contig8264:4281..4293Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8264 4282..4293 +
1692278146.3210933-UTR-M-pyrifera_M_contig8264:4281..42931692278146.3210933-UTR-M-pyrifera_M_contig8264:4281..4293Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8264 4282..4293 +
1622816733.272723-UTR-M-pyrifera_M_contig8264:9312..109981622816733.272723-UTR-M-pyrifera_M_contig8264:9312..10998Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8264 9313..10998 +
1692278146.4112942-UTR-M-pyrifera_M_contig8264:9312..109981692278146.4112942-UTR-M-pyrifera_M_contig8264:9312..10998Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8264 9313..10998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.1894386-CDS-M-pyrifera_M_contig8264:4293..44161622816733.1894386-CDS-M-pyrifera_M_contig8264:4293..4416Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 4294..4416 +
1692278146.3318644-CDS-M-pyrifera_M_contig8264:4293..44161692278146.3318644-CDS-M-pyrifera_M_contig8264:4293..4416Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 4294..4416 +
1622816733.2004132-CDS-M-pyrifera_M_contig8264:5735..58041622816733.2004132-CDS-M-pyrifera_M_contig8264:5735..5804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 5736..5804 +
1692278146.3427646-CDS-M-pyrifera_M_contig8264:5735..58041692278146.3427646-CDS-M-pyrifera_M_contig8264:5735..5804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 5736..5804 +
1622816733.212995-CDS-M-pyrifera_M_contig8264:6705..68261622816733.212995-CDS-M-pyrifera_M_contig8264:6705..6826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 6706..6826 +
1692278146.352181-CDS-M-pyrifera_M_contig8264:6705..68261692278146.352181-CDS-M-pyrifera_M_contig8264:6705..6826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 6706..6826 +
1622816733.2228055-CDS-M-pyrifera_M_contig8264:7740..78501622816733.2228055-CDS-M-pyrifera_M_contig8264:7740..7850Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 7741..7850 +
1692278146.3622954-CDS-M-pyrifera_M_contig8264:7740..78501692278146.3622954-CDS-M-pyrifera_M_contig8264:7740..7850Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 7741..7850 +
1622816733.2370138-CDS-M-pyrifera_M_contig8264:8370..84601622816733.2370138-CDS-M-pyrifera_M_contig8264:8370..8460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 8371..8460 +
1692278146.3725636-CDS-M-pyrifera_M_contig8264:8370..84601692278146.3725636-CDS-M-pyrifera_M_contig8264:8370..8460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 8371..8460 +
1622816733.2490194-CDS-M-pyrifera_M_contig8264:8783..88551622816733.2490194-CDS-M-pyrifera_M_contig8264:8783..8855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 8784..8855 +
1692278146.3826385-CDS-M-pyrifera_M_contig8264:8783..88551692278146.3826385-CDS-M-pyrifera_M_contig8264:8783..8855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 8784..8855 +
1622816733.261371-CDS-M-pyrifera_M_contig8264:9153..93121622816733.261371-CDS-M-pyrifera_M_contig8264:9153..9312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 9154..9312 +
1692278146.4006252-CDS-M-pyrifera_M_contig8264:9153..93121692278146.4006252-CDS-M-pyrifera_M_contig8264:9153..9312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8264 9154..9312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8264.19317.1prot_M-pyrifera_M_contig8264.19317.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8264 4294..9312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8264.19317.1

>prot_M-pyrifera_M_contig8264.19317.1 ID=prot_M-pyrifera_M_contig8264.19317.1|Name=mRNA_M-pyrifera_M_contig8264.19317.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MMASNIAVFGGNGLTGSEVVYQALDRGAKVTAFCRDPSKLSVPAGSGGAA
AGTPLANDNLKTVQQGSVTELDDVRKVFADGDISGVVVALGGKTADVGKT
MLTDGTTNIITAMKESGVSKVAVVTSIGAGDSEKQAPFFFKVLMYTAMKS
IFEDKNKQEDLFFKGPGKDLDFTVVRPGGLTVDPPTGTINVIKGEAGSIS
RADVADFLIGAISDEDFPYLKQAPCISSVGGTSWVKDRSKAARGEMA*
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mRNA from alignment at M-pyrifera_M_contig8264:4282..10998+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8264.19317.1 ID=mRNA_M-pyrifera_M_contig8264.19317.1|Name=mRNA_M-pyrifera_M_contig8264.19317.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6717bp|location=Sequence derived from alignment at M-pyrifera_M_contig8264:4282..10998+ (Macrocystis pyrifera P11B4 male)
TCTTGTGTGCGCATGATGGCCTCCAACATCGCCGTTTTCGGTGGCAATGG CCTCACAGGGTCGGAGGTGGTGTACCAGGCGCTCGACCGCGGGGCCAAGG TCACGGCCTTCTGCCGCGACCCTTCCAAGCTATCGGTGCGAGCGTGTCTT GCCATCTCTTGTCATCTCCTTTCTGTTGTATCTTGTCGTCTCGCGTAGGA TGCTATGTGCGCTCCCGACGGTTGCTTTCTTGTGCCGGGATGCTTTTGTC GGTAGGGCCCGTGTTTGTTTTTCTCGCGCGCTATAAACCTGTCTGTACAG TTTGCGCGTATATAGCCGGGGTCGCTTTGACTTCGTTTTGGTGTTGGGTG CAGCCTGAATGCTTACTGTAGTACTGTAGTTGTCGGCGCGCGTTATGCTT CGTTGCACTGTCCCCGGTTACTCCAGTGTCCATTTTTCGTGCCTCGTAAA CGAAGCTGCCGACCGTGCTGGACCCCGACCTTTGCACAACTCATGCGCTG ACACGTGTCAAGCGCGGCGTGCAAACAGCACCTGGTATGTCGGCGTTGTT CGCCAACTACTTTTTCTTGACGTAGATGGCGATATTTGTAAGCACCTTCG GCGTTCTCTGCTTTTCCTTTTTTGTCGTCTAGCGCACATAAAACAAAACC GGGCCTAGCTCAGACACGTTGGTCTCGCATTCGACAAGGGGAACGAAGCG CACAGCGACCCCAGCTCCATCTGAACTTACAGTTTGTGCGAATCAGAGGG TGGGTGCGGCGCCAAAAGATGAAGAGAGATTGCGATGCGTGGCGGTAGGG CGCAGGAAAAAGTCCTTTGGCATGCTTCCCGATAGACGCATGAGACGTAT GTGGGACTGCTCCACTCGTGCATACCGGATCCAGACCTCACCTCCCACGC ATGTAACCCACACTGACGTTTGTTATAGTTTAGGTGTTGCATGCACAAAC TGCGGTGTCTACCTTCTTTCAAGCGCTGCCAGCAACCGGTCATCGTTGAC CCCTCAAAACCACACTGCTGCCGCGTCATGCTTCCACCAGTGTGAAGAGT CCGCTATCCACTCGTTTTCCGCCACTCTAAACTCTCACCGGACTTGTCTT GTCTTACCCTCCGACGACTCTGAATGGGGCAAAAACAAGCCGATGGCGAA AGTGACAAGCCTGCTCAACCCCCAACTGATTAGACAAGGCGGCGATCACA GCATCGGCCACTGCAGGGTTGGAGGGCGATAATGGTTGATATTCCAACTA CACTGGTTGAAAGCAAGAAGTCGTACGACGCGGGCGCAGGCAGCGTGATC CTGCCTGTACCACTGCTGGGCACTCACACTACACGTGGACAGTTGATGAA GTTTTTTTTTTTTTTTTTTCCGGTCGCGATGTCGGGGTCCCAAAAGGAGG CAGTGCGATACGCAACATTTATTCAATGGTCGCCTGCCATGTTGTGAACT TTAGGTGCCGGCAGGGAGCGGCGGAGCAGCGGCGGGGACGCCGCTTGCGA ATGACAACCTCAAGACGGTCCAGGTATGAGACCCTATTGCCATACGAGCG GCATACCGCGATCGACAGGAAAATACCAAACTCAACTAAAACATTTTTGT GTATTTTACGCACGAAACTGATCTTGATGGGGTAGAATTGTTGTATGGTA AGGCACATGACCGAGTGATCCGGTTGCACTTACAGTAAGCCACGTACCCG AGAGGGTTGTCCGGTGGCCGGCTTGCGTGTGTTTCGTGCGCGGCCTTGGT GCCGGCCTCGGTCGTTTCCGCCCGCCAGTTATTCATGGGGAGTGGCGGCC CGACTTGTGGGTTAGGTGTTTGTCAGCCGCTGTGAGTGGTCGCCGTAAAA GTCGACAGTGGGGCCCTTACTTGCGTAGGCTTGGTTTTGTGATCGTTCGC CGTCCTTTTCCCCGAAGCATGTTTCCCGCCCGATGCTTCCGGTCGTAAGA GGGTGCCTTCTGCGGAGTACTGTAAGTAGTTCGGGGGTGCGCGCAGTGTG CAATGTGTGCTGGCGAGCGAGCAAGGGACTTTTTGGTGTTCCTCTGAACG AGTGCTGTTCGGTTCTTGCTTTTCGGTTCTTGCACAAGTGCATGTAGCCA AGTGCACCGCACCGTGCTGGTACCGTACCGTATCGCACTGCACTGGCACC TCTCCTCACAGCACCGTAACGAAGTGGAACCGTACCGCACATGCAACGCA CCGCACAGCACAGACACCTCACTGCATTGACTGCACTGGCACCGTGCTCC ACCTCACCGCACCGCACTAGCCCTGGCGCTGTGTTTGTTGCCGTTGTGTG GCGGCGTGCCCCCGTCGCTCGTGTCGCGACGGGTGCAGCAAGTAGGGCGC CGCTTGTCGCGCCCTCCTCGTAAAATACACCGCCGACCGTTTCCGTCTTG CGCTCGTGGGTGGGTGTTTTCGAGCAGGGTTCGGTGACAGAGCTCGACGA CGTCCGCAAGGTGTTCGCTGACGGCGACATCAGCGGCGTGGTGGTCGCGC TCGGAGGCAAAACCGCCGACGTTGGCAAGACCATGCTCACGGATGGTAAG TGCCTGATGGGCGGCGAGAGCTGGGCTCTCGCGTGGTGTTGACGATCTCG CGGAGGCTCTTGGATTGGATGGCCTGTTCGTCGATCCGATAGGAACGCGG ATGGTATCCCCACCCCCCCCCAACTCTAAAACGCACGACAATTTCAATCT CGACGGTTTTTTCATCTCGTCTCCGGCCTGTATGAATGAGCGTACCAGCG CTGCGGTAAGGTTCTGCGCCTTTGTACCTTTTGCGTGCAATGAGCGGTCG GTATCAACAATTGTTGATTCCCTCCTGACGTGCCGTGCTCAGGTACTTCT TAGGTTTTCAAGGGAGTCCGATTCCACCCGAGCCCAGGGTCGCAGCGCAG GACCACTCCGCCGTGTCTTGTTCGATTCCCCCCCGCCGCCCCCCCCCTCG CGAGTATTGTGGAGCTCCTTCTCGCTTGTCGACGATTGTCGATTTTTTTT TACTTCCTCCTCTCCCGCGTTGAGACCCGTCCGTGTGGCACCTTGGTAGT CCGACACCTTGTCCGCGCTAAGCCTCTGCCTTCGAGAGGCGCGTATCGTG CCCTGAAGCAGAAAATCGTGTCCGGAAGGGAGAGTAGGAGGGAGCTGCGG TAGTTCGTGTGGTTCACGTAGGGTCGGGATTCGACGCGAATCGCGACACT GCCCTGGCGCCAGCATCTCGTGCGGCTTCTAACTATGTATCTAGACCAAC ACGTCCACCGTACATGATCAACACAGGGCGCGGTTGCTGCCTTTCGCGCC TAGGACCGCCGACTATCTCTGCTTTGTGTTTGCTAGTGCTCGTGCAGGCT CGAAAAATTACGCTAAGACCAATCGCTCTACGCTCAGCGGCATCGTCTTA TTGTCCCTTTCTCTCTCTGCCACCGTCTCCCTCTGCTTCTCCCCTCTCCT GATGTGAAGGCACGACGAACATCATCACAGCGATGAAGGAGTCGGGCGTT TCGAAGGTGGCTGTTGTAACCAGCATCGGTGCGGGGGACAGCGAGAAGCA GGCGCCTTTCTTCTTCAAGGTGCAGTTTGCCAGTACTTCAATTTTGCGCT CGCATCAACGATGCTGCGGGTTGTTGACACGATCAATCATATTGACGATG GGTTTGCCATTCTACGTTCAATGCCTCGCTACTCGACTTTTATTCAATGA AAGGCAGCACACCTCCGACAGATCATGATCAATCTATTTATCTGTCTACA GATAGATGATCTAGTTCCTCACCTGCCGTTGTGAGAGGTTAGCTGTGCAG GATATGCCTTGTAGGGCAGATCATCCAACCCAGGAAACATGCGCTTGCTT GGTCGTGCAGATTGTACGGCTCACACCCGGCCGGTAACGTGAGCTGGTTC CTAATAGATGAGGAGTCTATCTTCTCTGAAGTATCTTACAGAAGATGATC AAGTGGAAATCGATGGTCTGCCCGAGGAGTGAAGGTCATTACAGGGTTGT GATTCTCGTCGGCGCATTATCCTCTTTCCCATGTGTCCCGCCCGCAACCC ACGGCTCCATGCACCCGCGTGTCGTCCGCCGCGAACCAGGTGCTCATGTA CACGGCTATGAAGAGCATATTCGAGGACAAGAACAAGCAGGAGGACCTCT TCTTCAAGGGCCCCGGGAAGGACCTCGACGTGAGTGACACGCCGACACTA CACGGTGATGGTGCCGCGCGGTATATCCCGTCGTCGGACAGCGGTGCTGT TTATGATGTTTTGAAGTGAGCGTCAACGTTTACGCACAAAAGGTGCAGTG CCGCCAAGTTGACCCCCTGTCGCGCAAACGACGCCCGACCGCCAGAACTA TTGATCCGAATAGATGGCTTCACCGTCTCGTTCTCCTCGCCCCTCGCAAC TCGTTTCGCTCTTTTCGATGGCATCGCGAATCGTACGCGACGGCGCCCTT ACTATCCCTCTCCTTCGTTGGCGTCACTTCCGTGCGTTTGTGCGGTGTGA AGTTCACGGTGGTGCGACCCGGCGGCCTCACCGTCGACCCCCCCACGGGC ACGATCAACGTCATCAAGGGGGAGGTGAGCCTATCTCGACGGACGTGGTT CGGTATACTTTGATTTTCGTCGGAAATGGGACGTGGAATCTTCCGGCGGT GGTACAGAAAAGTAGTAATGCTTTGACCTTGGGGTAAACGTGATGTAGAT GGAACAAGGGGCCAAGATCAACACGTGCCCGCCAATTCGTGGCCCTCTTC AGCTAGTGCAGTCCCCGGGTGTATCGTTCGCCGGAAGTGACATTCAAGAC CCCCCCCTTCCCTTCATCTCCCCTCCTTCCTTCCGGCCGGTGTTTCCTTG CGCTTTCTGCTCTGTTCCGCAGGCGGGCTCCATCAGCCGTGCTGACGTGG CGGACTTCCTCATTGGAGCAATCTCGGACGAAGACTTCCCGTACCTCAAG CAAGCGCCGTGCATCAGCTCGGTGGGGGGCACGAGCTGGGTTAAGGACCG TTCCAAGGCCGCCCGCGGCGAAATGGCTTAAAATACGTTGACCCGCAATG GAAAATTCATACCCAAAAGTTCTCTTTTTGCGTAAGGTTGGTTGCGCGTG CTCCTATTCATGTTCCCGTTCCTGTTTGGCAGCGCGTTGGATCATCCTCG GGTGTGATGGCCTGGTGTCTGTGCCCGCCCGCCCTTGAGCGATCGCGCGT GGGGTGCTGTGGCACTCGCCGTTATGTTCTCGCTTCGCAACCCAGGGTTT TGTTTTGTTGCTTGCAAGCTGGGTTGAAGGTGGGAATAGGAAGGAGTTGC CATTGTTTTCGTGCGGTTAAAACAGGGGGGCGGAGGAGGAAGGGCCGGAG TCGGCCGAGTTCGCATGTAGCGCGCGGCCTCTCTTTTCGGGGAAGGAGTC CGCCGCTGTTTATTGTCGCGTTTCGTCGTTTTACGTTGTGTAATGAATTC TCACCGTTTCCATGTAGCCTGGGACGTACGAAAGCGCGTGGGCTCAAAGG AGAGATATTATCTAGTATAGAACAGCCAAGGGGGGGTGCAATCCTTCTAT GAATGATTCATTTTCTCAGTTCGTTTGTTTGTTAGTACTCCGCAGTCCAC GGAAGCATTACGTTCGGCTAGAGAACAACTTCGTGCACAGGTCGTCAGGA ATGATGCTACGGTATAGTTCAAGTGGACAGGACGGCTCAGCTCTGCTTGG TTACAGGGGGCGTTGGTATGTCACACCCACCTGCGTTGGCGCTTTCCAAC GTTGCTGTCTGGCCGTTGCGCCGCGCATGTCAGCATCGTCTCCCAGTTTC GTCCACGCTGCGTGCGTTTCTGGCTGTTGCCGGTTTGTCTTCCCGACGGG CTGATCGGACCTTGGGGTGCGAAATAGTGATGTCGGTGTGTTGGGTCGGG AGGGGGGGAGATAATTCTACCAGAGCCTCAAAAGTACGCCCCCTGGTCGC TTAATGTCCAGAGGACGCGGTGTGCTTCCGTTACTCGTACCGGCGCATAG CGTACAGCACAAGGGTTGATTGGGTAAAAGCGCAACTACGCGGAGAGTGG AAGCACCGCTATTTGTGAACGGTTAGATATTAGCAGGCGGGGAACATGGA ACTTGCGCAGGTTACGTTCTACTTCGTTCACCCTTTTTAGTACTCAGAGT CGCACTTAGCACAATGTTAATGTTCCACCCAGCAGTAATGTCAAGCAGCG TGTCCCCGAAACGTGGTTGCGTTTCAAAAGTGTTGAGCTCGTTCGGGGCC GTCAGATCGCCTGGCTTTGTCGTGTCAAGCCTTGTGCCAAGCGCTTGCTG GCGCAAACGGGCGAGCGAGCGAGTGGGGGAGAGGCAGAAGATGACACGAT ATGCTGGGGCTATCGGTGTGTATGTTTACGGTTGCCGCCTCTGTCAGCAT GTTTTACTATGTGACGTGCGCACCGGTACGTGTGCAAACACTGTCCACGC TTTCGCCACCACCACAGCAGTAAAACGTTTTCCTTCCCACACCGCTCATG TGATTGATGAGTGAGACGGGGCCGGCGACTTGCTTTCGGGTTTTTTTGTT TTCACTTCTCTTTTTCGGCCTGTGTGAGTACCTCTTTTTACTGCGTTCCG ACATACATAGCGGGTGGCAATACTTTACGTACGATAGAAGGGTAAGAGGC GATGCCACAAATACATTCAGACACTAATATTTCAGCTCTTGCCGCCCATG CGTGGCGCCGTACCCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8264:4282..10998+

>mRNA_M-pyrifera_M_contig8264.19317.1 ID=mRNA_M-pyrifera_M_contig8264.19317.1|Name=mRNA_M-pyrifera_M_contig8264.19317.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig8264:4282..10998+ (Macrocystis pyrifera P11B4 male)
ATGATGGCCTCCAACATCGCCGTTTTCGGTGGCAATGGCCTCACAGGGTC
GGAGGTGGTGTACCAGGCGCTCGACCGCGGGGCCAAGGTCACGGCCTTCT
GCCGCGACCCTTCCAAGCTATCGATGATGGCCTCCAACATCGCCGTTTTC
GGTGGCAATGGCCTCACAGGGTCGGAGGTGGTGTACCAGGCGCTCGACCG
CGGGGCCAAGGTCACGGCCTTCTGCCGCGACCCTTCCAAGCTATCGGTGC
CGGCAGGGAGCGGCGGAGCAGCGGCGGGGACGCCGCTTGCGAATGACAAC
CTCAAGACGGTCCAGGTGCCGGCAGGGAGCGGCGGAGCAGCGGCGGGGAC
GCCGCTTGCGAATGACAACCTCAAGACGGTCCAGCAGGGTTCGGTGACAG
AGCTCGACGACGTCCGCAAGGTGTTCGCTGACGGCGACATCAGCGGCGTG
GTGGTCGCGCTCGGAGGCAAAACCGCCGACGTTGGCAAGACCATGCTCAC
GGATGCAGGGTTCGGTGACAGAGCTCGACGACGTCCGCAAGGTGTTCGCT
GACGGCGACATCAGCGGCGTGGTGGTCGCGCTCGGAGGCAAAACCGCCGA
CGTTGGCAAGACCATGCTCACGGATGGCACGACGAACATCATCACAGCGA
TGAAGGAGTCGGGCGTTTCGAAGGTGGCTGTTGTAACCAGCATCGGTGCG
GGGGACAGCGAGAAGCAGGCGCCTTTCTTCTTCAAGGCACGACGAACATC
ATCACAGCGATGAAGGAGTCGGGCGTTTCGAAGGTGGCTGTTGTAACCAG
CATCGGTGCGGGGGACAGCGAGAAGCAGGCGCCTTTCTTCTTCAAGGTGC
TCATGTACACGGCTATGAAGAGCATATTCGAGGACAAGAACAAGCAGGAG
GACCTCTTCTTCAAGGGCCCCGGGAAGGACCTCGACGTGCTCATGTACAC
GGCTATGAAGAGCATATTCGAGGACAAGAACAAGCAGGAGGACCTCTTCT
TCAAGGGCCCCGGGAAGGACCTCGACTTCACGGTGGTGCGACCCGGCGGC
CTCACCGTCGACCCCCCCACGGGCACGATCAACGTCATCAAGGGGGAGTT
CACGGTGGTGCGACCCGGCGGCCTCACCGTCGACCCCCCCACGGGCACGA
TCAACGTCATCAAGGGGGAGGCGGGCTCCATCAGCCGTGCTGACGTGGCG
GACTTCCTCATTGGAGCAATCTCGGACGAAGACTTCCCGTACCTCAAGCA
AGCGCCGTGCATCAGCTCGGTGGGGGGCACGAGCTGGGTTAAGGACCGTT
CCAAGGCCGCCCGCGGCGAAATGGCTTAAGCGGGCTCCATCAGCCGTGCT
GACGTGGCGGACTTCCTCATTGGAGCAATCTCGGACGAAGACTTCCCGTA
CCTCAAGCAAGCGCCGTGCATCAGCTCGGTGGGGGGCACGAGCTGGGTTA
AGGACCGTTCCAAGGCCGCCCGCGGCGAAATGGCTTAA
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