mRNA_M-pyrifera_M_contig82592.19307.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82592.19307.1
Unique NamemRNA_M-pyrifera_M_contig82592.19307.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A3B8IXH4_9BACT (Uncharacterized protein (Fragment) n=3 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IXH4_9BACT)

HSP 1 Score: 229 bits (585), Expect = 2.280e-67
Identity = 115/235 (48.94%), Postives = 169/235 (71.91%), Query Frame = 1
Query:  103 PIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGRVFNIYFHLFAYLFFYIVLFDK 807
            P+ DG E +   Y+KY++EGKLPIF MT+ G +A+L+G+GYLMQ++ +  G Y  ++KV +GF+ A +    G  L  + +++REY + ++ L I+LNY++IYFLSDLGNFP LSSS+VGF LI +NT     LAL+FETR+++ L LLGG+ AP Y+ STDDG+ YY YLW L  G+ +VA++I+W+ L+ ++F +S +LLE   F   P   +F +Y+HLFAYLFF ++L +K
Sbjct:  169 PLPDGFEVIRKSYQKYKEEGKLPIFFMTLAGGIALLYGIGYLMQYTLKLTGDYSEIIKVGMGFVAAAAALFIGIRLTKRDDQYREYGAMVMSLGIVLNYVMIYFLSDLGNFPTLSSSLVGFGLIVLNTGAGIGLALRFETRLIATLFLLGGAFAPFYLQSTDDGSSYYGYLWLLTAGTCFVAWRIRWRGLYQLAFGISSVLLEANAFLQEPDSGLFVVYYHLFAYLFFALLLVEK 403          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A315YX86_9BACT (Putative membrane protein DUF2339 n=1 Tax=Sediminitomix flava TaxID=379075 RepID=A0A315YX86_9BACT)

HSP 1 Score: 217 bits (553), Expect = 4.660e-61
Identity = 109/235 (46.38%), Postives = 165/235 (70.21%), Query Frame = 1
Query:  103 PIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGRVFNIYFHLFAYLFFYIVLFDK 807
            PI +    LS +Y +Y++EGKLPI  MT+ G+VA+LFG GYLMQ++    G +  VVKV  GF+   ++   G+ LF + +K+ ++ SAL+GL + LNYL+IYF+S LG FP LSSS++GF L+ +NT L   LAL+ E +++++L L GG+ AP Y+ ST++G LY+LYLWFL +G+  ++ +I W+ L  ++F+ S+ LLE ++F   P+  +F  Y HLFAYLFF+ V+F+K
Sbjct:  143 PISEAFGLLSGIYFRYKKEGKLPILFMTLAGVVAMLFGFGYLMQYALPKFGKWAEVVKVGSGFLSGVAVIVVGFRLFFRDQKYEDFGSALVGLGLALNYLMIYFMSGLGEFPSLSSSLLGFILVVLNTGLGVFLALRLEAKIIAVLFLFGGAYAPFYLSSTENGQLYFLYLWFLTLGAILISERIAWRGLFYLAFLNSVFLLEYSVFEQRPNQLLFVAYDHLFAYLFFFFVVFEK 377          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: UPI0018CB67D4 (DUF2339 domain-containing protein n=1 Tax=Aureivirga marina TaxID=1182451 RepID=UPI0018CB67D4)

HSP 1 Score: 203 bits (517), Expect = 3.620e-56
Identity = 109/243 (44.86%), Postives = 166/243 (68.31%), Query Frame = 1
Query:   82 KLKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGRVFNI-YFHLFAYLFFYIVLFDK 807
            ++   F P   G +    +Y KY+ EGKLPIF MT+ GI+AILFG+GY +Q     LGIY  V++  LGF +A +IG  G  L  + + ++E+ SALI L+I+L YL+ Y+ + + +FP+ SS+ VGF LI   T ++  L+ KFET+++++LSL+GG+LAPL++ ++ +  LY+ YLW L+  +N++A KIKW  L+ ISF++ + ++E +IF + PS  +F I   H FAYLFFYIVLF+K
Sbjct:   87 EISAIFSPFFSGLDLFKQLYSKYKTEGKLPIFFMTIAGIIAILFGLGYFLQSDL--LGIYSDVLRNVLGFGVAITIGFMGIRLQKKEKIYQEFGSALISLAILLGYLVTYYTTQMTSFPIFSSATVGFLLIVATTGISIFLSFKFETKIIALLSLIGGALAPLFLENSGNSDLYFAYLWILIFAANFIANKIKWNELNYISFILFVAIVETSIF-YTPSNSIFFIGILHAFAYLFFYIVLFEK 326          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: UPI0018C95EBC (DUF2339 domain-containing protein n=1 Tax=Aureivirga sp. CE67 TaxID=1788983 RepID=UPI0018C95EBC)

HSP 1 Score: 195 bits (496), Expect = 3.360e-53
Identity = 105/243 (43.21%), Postives = 163/243 (67.08%), Query Frame = 1
Query:   82 KLKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGRVFNI-YFHLFAYLFFYIVLFDK 807
            +L   F P + G +    +Y K++ EGKLPIF MT+ GIVAILFG+GY +Q     LG+Y  +++  LGF +A  +G FG  L  + + ++E+ SALI LSI+L YL+ Y+ + + NFP+ SS+ +GF LI  NT +A   A +FET+++++LSL+GG+L P ++ +  +  LY+ YLW L+  +N++A KIKWK L+ +SF++ + ++E ++F   PS  +F I   H F YLFFYI+LF+K
Sbjct:  144 ELTGIFAPFLSGFDLFKKLYLKFKTEGKLPIFFMTIAGIVAILFGLGYFLQSDL--LGVYSELLRNILGFGVAALVGFFGVRLQKKEKLYQEFGSALISLSILLGYLVTYYTTQMTNFPVFSSAKIGFLLIVANTGIAIFFAFRFETKIIALLSLVGGALTPFFLGNEGNSDLYFAYLWILIFAANFIANKIKWKELNYVSFLLFVAIMETSLFFS-PSASIFFIAIIHAFTYLFFYIILFEK 383          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: UPI0018CC3FB5 (DUF2339 domain-containing protein n=1 Tax=Aureispira sp. CCB-QB1 TaxID=1313421 RepID=UPI0018CC3FB5)

HSP 1 Score: 169 bits (427), Expect = 7.420e-44
Identity = 105/247 (42.51%), Postives = 160/247 (64.78%), Query Frame = 1
Query:   85 LKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFS-FQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGT-LYYLYLWFLVVGSNYVAYKIKWKALHDISFV-VSMILLELAIFNHLP----SGRVFNIYFHLFAYLFFYIVLFD 804
            L+QFF P+I G  F+   Y++Y+ EGKL +F +TV GIV +LFG G+L Q+S   Y G Y   +KV  G I + +    G  L  + +K+ E+  AL+GL + LNYL IYFLS   + PL+SS+I GF LI +NT ++ +L+L++E++++++L+L GG+LAP Y+ ST + T +Y+ YLW L   S Y A ++ W+ L+ ISF+ V++IL     FN+      S  ++ + FH FAY++ YI LFD
Sbjct:  351 LEQFFAPLISGIAFIEEKYDEYKTEGKLSLFFLTVAGIVTLLFGFGFLAQYSAVTYFGDYLTQIKVGFGLICSCAAIGIGGRLIKKDKKFVEFGQALMGLGLSLNYLFIYFLS--ADPPLISSTI-GFLLIFLNTSVSIVLSLRYESKIIALLALSGGALAPSYLQSTGENTHIYFAYLWLLCAASAYSAKRLGWETLNFISFLLVTLILGSSTYFNYADAKGLSDIMYLLLFHAFAYMYAYISLFD 594          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A6S6TLL2_9BACT (Membrane protein DUF2339 (Fragment) n=1 Tax=uncultured Aureispira sp. TaxID=1331704 RepID=A0A6S6TLL2_9BACT)

HSP 1 Score: 169 bits (427), Expect = 7.540e-44
Identity = 99/249 (39.76%), Postives = 162/249 (65.06%), Query Frame = 1
Query:   85 LKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFS-FQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGT-LYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGR-----VFNIYFHLFAYLFFYIVLFDKL 810
            +++FF P++     +   Y +Y++EGKL +F +TV GIV +LFG G+L Q+S   YLG Y   +KV+LGF+ + +    G  L  +  K+ E+  AL+GL + LNYL IYFLS   + PL++S+ VGF LI +NT ++ +L+L++E++++++L+LLGG+LAP Y+ ST + T +Y+ YLW L   S Y A ++ W  L+ +SFV+ +++L  + + +    +     ++ I FH FAYL+ Y+ LFD L
Sbjct:  380 IEEFFAPLVIAVSAVEKKYMEYKKEGKLSLFFLTVAGIVTLLFGFGFLAQYSAVTYLGEYLTQLKVALGFVCSSAAIGIGIRLIKKDRKFAEFGQALMGLGLSLNYLFIYFLS--ADPPLITST-VGFVLIMLNTAVSIVLSLRYESKIIAVLALLGGALAPSYLQSTGESTHIYFAYLWLLCASSAYTAKRLSWDVLNFVSFVLVILILGRSTYFNYADAQGLPDLMYLILFHAFAYLYAYLSLFDGL 625          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A8J7SRN2_9BACT (DUF2339 domain-containing protein n=1 Tax=Aureispira sp. TaxID=1872660 RepID=A0A8J7SRN2_9BACT)

HSP 1 Score: 163 bits (413), Expect = 3.460e-42
Identity = 96/249 (38.55%), Postives = 157/249 (63.05%), Query Frame = 1
Query:   85 LKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFS-FQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGT-LYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGR-----VFNIYFHLFAYLFFYIVLFDKL 810
            +++FF P++     +   Y +Y++EGKL +F +TV GIV +LFG G+L Q+S   Y       +KV  GFI + +    G  L  Q  K+ E+  AL+GL + LNYL IYFLS   + PL++S+ VGF LI +NT ++ +LA+++E++++++L+LLGG+LAP Y+ ST + T +Y+ YLW L   S Y A ++ W  L+ ISF++ +++L  + + +    +     ++ + FH FAYL+ Y+ LFD L
Sbjct:  345 VEEFFTPLVSAVSVVEKKYLEYKKEGKLSMFFLTVAGIVTLLFGFGFLAQYSAVTYFEDSLTQIKVGFGFICSSAAIGIGIRLIKQDRKFEEFGQALMGLGLSLNYLFIYFLS--ADPPLITSA-VGFGLIMLNTAVSVVLAIRYESKIIAVLALLGGALAPSYLQSTGESTHIYFAYLWLLCAASAYTAKRLSWDVLNFISFILVLLILGRSTYFNYADAQGLPDIMYLLLFHAFAYLYAYLSLFDGL 590          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A1I2JJR6_9BACT (Predicted membrane protein n=1 Tax=Thermoflexibacter ruber TaxID=1003 RepID=A0A1I2JJR6_9BACT)

HSP 1 Score: 160 bits (405), Expect = 6.090e-41
Identity = 97/246 (39.43%), Postives = 147/246 (59.76%), Query Frame = 1
Query:   79 AKLKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGR---VFNIYFHLFAYLFFYIVLFDK 807
            A +   F P+    +  ++ Y+ Y+ + +LP+F MT+ G++AIL G  YLMQF      IY    KV  GF+ +F I   G  L  + +K+ E+ SAL+GLSI +N+L++Y+LSD   FP+ ++ IV F LI +NT  A  LAL++ET++V  +S LGG  +P Y+ S      Y+ YLW L V + ++A KIKW+    + F+ + I LE+A F+ L  G    V+ +    FAYLFFY+ LF+ 
Sbjct:  127 AFVTDLFMPLAQFRDLFTATYQHYKAQNRLPVFFMTLGGVIAILLGFTYLMQFIPD---IYFETFKVGGGFLASFGILFSGVVLLRKEQKYHEFGSALLGLSIAINFLILYYLSDSKVFPIFANPIVSFILILLNTAFAKWLALRYETKIVLTISFLGGVFSPFYLSSPATPVFYFAYLWLLCVAAIFIASKIKWQIGDFLVFITASIALEIA-FSSLVEGFPAFVYTLIVMAFAYLFFYVSLFEN 368          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A2E9FX62_9RHOB (Uncharacterized protein n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9FX62_9RHOB)

HSP 1 Score: 152 bits (383), Expect = 5.070e-40
Identity = 98/261 (37.55%), Postives = 154/261 (59.00%), Query Frame = 1
Query:   46 NEKESTLIPKYAKLKQFFHPIIDGTEFLSSVYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQ-YLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVG----FSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIF-NHLPSGRVFNIYF-HLFAYLFFYIVLFDK 807
            +E E  +    + +   FH + D   F+  +Y  Y++E KLP+F MTV GIVAIL G G+L+Q++   Y       +K+  GFI  F++G  G  L+ ++  ++E+ SAL+ L++ILNYL+IY+L+ +        S  G    + LI +NT LA   A+  ET+V+++L+LLGG   P +I S +   +Y++YLWFL V   +++ KI WK L ++ FV   + LE   + ++     V  I F HLFAYLF+Y++LF K
Sbjct:  126 SEFEKAIAAIISSISPIFHDLFD---FIGKIYLHYKKEDKLPVFFMTVGGIVAILLGSGFLLQYALSTYFVNLPQALKIGSGFIPTFALGWLGLFLYKKKSLYQEFGSALVALALILNYLIIYYLAGVET-----GSGYGTWWEYGLIVLNTALALGFAIWMETKVIAVLTLLGGVFCPFFIQSENIPLVYFVYLWFLSVSVVWLSQKIHWKMLRNLMFVTVTLTLEGVFWTDYTQIDTVIQIVFLHLFAYLFYYVLLFKK 378          
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Match: A0A3B1A4N5_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1A4N5_9ZZZZ)

HSP 1 Score: 132 bits (333), Expect = 2.440e-31
Identity = 88/224 (39.29%), Postives = 138/224 (61.61%), Query Frame = 1
Query:  136 VYEKYRQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQ-YLGIYEGVVKVSLGFILAFSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSSSIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDD-GTLYYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFN----HLPSGRVFNIYFHLFAYLFFY 789
            VY++Y+++G+ P FLMT  GI+A++ G G+L+Q+SF  YLG      K++ GFI A +I   G  +   R    E+ +ALIGL IILNYL  YF+S  G+F ++  +I G +L+A+ T  A  LA+ ++T+ V++LSLLGG+  PL++       ++Y++YL FLV    ++AYKIKW  L   + ++S+ + +   F     +L +  VF I  H+  YLF Y
Sbjct:  139 VYQRYQEQGRGPAFLMTAAGILALVMGFGFLLQYSFSNYLGTGG---KIATGFISAIAIVALGIKISNTRSMLSEFGAALIGLGIILNYLCAYFIS--GHFNIVGPTI-GLTLLAVITSAAYWLAVHYDTKTVAVLSLLGGASTPLFLGDLSQVSSIYFVYLGFLVATMLHLAYKIKWPYLIQFTLIISIAMTQYLFFEQGAQYLINNSVFIIVLHVVFYLFSY 356          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82592.19307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B8IXH4_9BACT2.280e-6748.94Uncharacterized protein (Fragment) n=3 Tax=Cytopha... [more]
A0A315YX86_9BACT4.660e-6146.38Putative membrane protein DUF2339 n=1 Tax=Sedimini... [more]
UPI0018CB67D43.620e-5644.86DUF2339 domain-containing protein n=1 Tax=Aureivir... [more]
UPI0018C95EBC3.360e-5343.21DUF2339 domain-containing protein n=1 Tax=Aureivir... [more]
UPI0018CC3FB57.420e-4442.51DUF2339 domain-containing protein n=1 Tax=Aureispi... [more]
A0A6S6TLL2_9BACT7.540e-4439.76Membrane protein DUF2339 (Fragment) n=1 Tax=uncult... [more]
A0A8J7SRN2_9BACT3.460e-4238.55DUF2339 domain-containing protein n=1 Tax=Aureispi... [more]
A0A1I2JJR6_9BACT6.090e-4139.43Predicted membrane protein n=1 Tax=Thermoflexibact... [more]
A0A2E9FX62_9RHOB5.070e-4037.55Uncharacterized protein n=1 Tax=Thalassobius sp. T... [more]
A0A3B1A4N5_9ZZZZ2.440e-3139.29Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82592contigM-pyrifera_M_contig82592:99..908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score169.9
Seed ortholog evalue1.7e-39
Seed eggNOG ortholog1313421.JHBV01000023_gene5139
Preferred nameOtg1
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.membrane
EggNOG OGsCOG5373@1,COG5373@2
COG Functional cat.KLT
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816732.7204528-CDS-M-pyrifera_M_contig82592:98..9081622816732.7204528-CDS-M-pyrifera_M_contig82592:98..908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82592 99..908 +
1692278146.0911534-CDS-M-pyrifera_M_contig82592:98..9081692278146.0911534-CDS-M-pyrifera_M_contig82592:98..908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82592 99..908 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82592.19307.1prot_M-pyrifera_M_contig82592.19307.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82592 99..908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82592.19307.1

>prot_M-pyrifera_M_contig82592.19307.1 ID=prot_M-pyrifera_M_contig82592.19307.1|Name=mRNA_M-pyrifera_M_contig82592.19307.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
PSQNSEEEDLETFVKNEKESTLIPKYAKLKQFFHPIIDGTEFLSSVYEKY
RQEGKLPIFLMTVLGIVAILFGVGYLMQFSFQYLGIYEGVVKVSLGFILA
FSIGTFGYHLFLQREKWREYASALIGLSIILNYLLIYFLSDLGNFPLLSS
SIVGFSLIAINTILAAILALKFETRVVSILSLLGGSLAPLYIHSTDDGTL
YYLYLWFLVVGSNYVAYKIKWKALHDISFVVSMILLELAIFNHLPSGRVF
NIYFHLFAYLFFYIVLFDKL
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mRNA from alignment at M-pyrifera_M_contig82592:99..908+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82592.19307.1 ID=mRNA_M-pyrifera_M_contig82592.19307.1|Name=mRNA_M-pyrifera_M_contig82592.19307.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig82592:99..908+ (Macrocystis pyrifera P11B4 male)
CCGAGCCAGAATAGTGAGGAGGAAGATTTAGAAACCTTTGTTAAAAATGA GAAAGAATCCACTTTAATACCAAAATACGCTAAGCTAAAGCAGTTTTTTC ACCCTATTATAGATGGAACGGAATTCTTATCAAGTGTCTATGAAAAATAT AGACAAGAGGGGAAATTACCTATATTTTTGATGACTGTTTTAGGTATTGT TGCTATCCTTTTTGGAGTTGGGTATTTAATGCAATTTTCGTTTCAGTACC TCGGAATATATGAAGGAGTTGTAAAAGTCTCTTTAGGTTTTATTCTGGCT TTTTCAATTGGTACATTTGGATACCATTTGTTTCTGCAACGTGAGAAGTG GCGAGAATATGCTTCAGCATTAATAGGGCTTTCGATAATATTAAACTATC TATTAATCTATTTCTTATCTGACTTAGGTAATTTTCCCCTTCTTTCTTCG TCCATTGTTGGGTTCAGTCTAATTGCCATTAACACCATACTGGCTGCAAT TCTAGCTTTGAAATTTGAAACAAGGGTTGTTTCTATCTTATCCCTTCTCG GAGGTTCTCTTGCTCCATTGTATATCCATTCTACCGATGATGGTACTTTA TACTATTTGTATTTGTGGTTTTTAGTAGTTGGTTCTAATTACGTCGCGTA CAAAATAAAGTGGAAAGCCCTTCATGATATTTCTTTTGTGGTAAGTATGA TATTACTAGAGCTAGCCATTTTTAATCACCTACCCAGTGGTCGTGTTTTC AACATTTACTTTCATCTATTTGCATATCTGTTTTTTTACATAGTTCTTTT TGATAAGCTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82592:99..908+

>mRNA_M-pyrifera_M_contig82592.19307.1 ID=mRNA_M-pyrifera_M_contig82592.19307.1|Name=mRNA_M-pyrifera_M_contig82592.19307.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig82592:99..908+ (Macrocystis pyrifera P11B4 male)
CCGAGCCAGAATAGTGAGGAGGAAGATTTAGAAACCTTTGTTAAAAATGA
GAAAGAATCCACTTTAATACCAAAATACGCTAAGCTAAAGCAGTTTTTTC
ACCCTATTATAGATGGAACGGAATTCTTATCAAGTGTCTATGAAAAATAT
AGACAAGAGGGGAAATTACCTATATTTTTGATGACTGTTTTAGGTATTGT
TGCTATCCTTTTTGGAGTTGGGTATTTAATGCAATTTTCGTTTCAGTACC
TCGGAATATATGAAGGAGTTGTAAAAGTCTCTTTAGGTTTTATTCTGGCT
TTTTCAATTGGTACATTTGGATACCATTTGTTTCTGCAACGTGAGAAGTG
GCGAGAATATGCTTCAGCATTAATAGGGCTTTCGATAATATTAAACTATC
TATTAATCTATTTCTTATCTGACTTAGGTAATTTTCCCCTTCTTTCTTCG
TCCATTGTTGGGTTCAGTCTAATTGCCATTAACACCATACTGGCTGCAAT
TCTAGCTTTGAAATTTGAAACAAGGGTTGTTTCTATCTTATCCCTTCTCG
GAGGTTCTCTTGCTCCATTGTATATCCATTCTACCGATGATGGTACTTTA
TACTATTTGTATTTGTGGTTTTTAGTAGTTGGTTCTAATTACGTCGCGTA
CAAAATAAAGTGGAAAGCCCTTCATGATATTTCTTTTGTGGTAAGTATGA
TATTACTAGAGCTAGCCATTTTTAATCACCTACCCAGTGGTCGTGTTTTC
AACATTTACTTTCATCTATTTGCATATCTGTTTTTTTACATAGTTCTTTT
TGATAAGCTACCGAGCCAGAATAGTGAGGAGGAAGATTTAGAAACCTTTG
TTAAAAATGAGAAAGAATCCACTTTAATACCAAAATACGCTAAGCTAAAG
CAGTTTTTTCACCCTATTATAGATGGAACGGAATTCTTATCAAGTGTCTA
TGAAAAATATAGACAAGAGGGGAAATTACCTATATTTTTGATGACTGTTT
TAGGTATTGTTGCTATCCTTTTTGGAGTTGGGTATTTAATGCAATTTTCG
TTTCAGTACCTCGGAATATATGAAGGAGTTGTAAAAGTCTCTTTAGGTTT
TATTCTGGCTTTTTCAATTGGTACATTTGGATACCATTTGTTTCTGCAAC
GTGAGAAGTGGCGAGAATATGCTTCAGCATTAATAGGGCTTTCGATAATA
TTAAACTATCTATTAATCTATTTCTTATCTGACTTAGGTAATTTTCCCCT
TCTTTCTTCGTCCATTGTTGGGTTCAGTCTAATTGCCATTAACACCATAC
TGGCTGCAATTCTAGCTTTGAAATTTGAAACAAGGGTTGTTTCTATCTTA
TCCCTTCTCGGAGGTTCTCTTGCTCCATTGTATATCCATTCTACCGATGA
TGGTACTTTATACTATTTGTATTTGTGGTTTTTAGTAGTTGGTTCTAATT
ACGTCGCGTACAAAATAAAGTGGAAAGCCCTTCATGATATTTCTTTTGTG
GTAAGTATGATATTACTAGAGCTAGCCATTTTTAATCACCTACCCAGTGG
TCGTGTTTTCAACATTTACTTTCATCTATTTGCATATCTGTTTTTTTACA
TAGTTCTTTTTGATAAGCTA
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