mRNA_M-pyrifera_M_contig82469.19278.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A7V9A641_9BACT (Protein flp n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V9A641_9BACT) HSP 1 Score: 177 bits (449), Expect = 4.520e-53 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 Query: 1 RHSLKSGTIENMLTPQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 RHSLKSGTIENMLTPQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME Sbjct: 262 RHSLKSGTIENMLTPQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 345
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A7Y8LJE2_9BACT (Beta-lactamase family protein n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y8LJE2_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 1.640e-16 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1 Query: 79 RGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 RGLGWV+ + +T + YHSGSN TGFRC SQFDP+ G+VIMTNG NG ++W+ +++ Sbjct: 116 RGLGWVIDSTITGNIVYHSGSNQTGFRCYSQFDPQEGNGIVIMTNGENGSELWRRLIK 173
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: UPI001F2121C3 (beta-lactamase family protein n=1 Tax=Rubinisphaera sp. JC750 TaxID=2898658 RepID=UPI001F2121C3) HSP 1 Score: 81.6 bits (200), Expect = 2.070e-16 Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 4 HSLKSGTIENMLTPQITLPDNEDRARGLGWVLKT----GVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 HSL S +E ML P I+ + ++ GLGW L+ G P + YHSGSNGTGFRC+S+F P+ G+VIMTN + G++++ A++E Sbjct: 255 HSLNSQMVERMLAP-ISHREEQNADWGLGWGLRNATPKGDQPKLVYHSGSNGTGFRCHSEFQPERGTGLVIMTNAIGGKELYTALVE 340
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: F0SGG4_RUBBR (Beta-lactamase n=2 Tax=Rubinisphaera brasiliensis TaxID=119 RepID=F0SGG4_RUBBR) HSP 1 Score: 81.6 bits (200), Expect = 2.920e-16 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 1 RHSLKSGTIENMLTPQITLPDNEDRARGLGWVLKT----GVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 +HSL S ++ MLTP + + ++ GLGW L+ G P + YHSGSNGTGFRC+S+F P+ G+VIMTN + G++++ A++E Sbjct: 379 KHSLSSQMVDQMLTPN-SHREEQNADWGLGWGLRNTTPKGDQPKLVYHSGSNGTGFRCHSEFQPERGTGLVIMTNAIGGKELYTALVE 465
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A6L3ZW55_9BACT (Serine hydrolase n=2 Tax=Ignavibacteriae TaxID=1134404 RepID=A0A6L3ZW55_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 7.740e-16 Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 1 RHSLKSGTIENMLTPQITLPDNE--DRA---------RGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 +H L I ML Q+ + E DR R LGW + + +T V YHSG+N TGFRC SQF PK G+VIMTNG NG K+WQ +++ Sbjct: 403 KHFLSEKIINEMLKHQVRVDTREVIDRPGRNIGLFAFRNLGWAVDSTITGDVVYHSGANQTGFRCYSQFSPKDGSGIVIMTNGENGSKLWQRIIK 497
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A356ENP8_9PLAN (Beta-lactamase domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356ENP8_9PLAN) HSP 1 Score: 74.3 bits (181), Expect = 2.780e-15 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 4 HSLKSGTIENMLTPQITLPDNEDRAR-----------GLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 HSL T++ MLT + + R GLGW + YH G+NG+GFRC ++FDP+ GVVIMTNG++G K+W+AV+E Sbjct: 24 HSLSRETVKEMLTREFQADGRKPIKRCSPAVSDDVYFGLGWHIDATPLGDRIYHGGTNGSGFRCYNEFDPQRGSGVVIMTNGLSGDKLWEAVVE 117
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A7J4VFZ7_9BACT (Class A beta-lactamase-related serine hydrolase n=1 Tax=Chlorobi bacterium TaxID=2268192 RepID=A0A7J4VFZ7_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 2.630e-14 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 7 SLKSGTIENMLTPQITLPDNEDRAR-----------GLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 SL +GTI+ ML Q+ P E + R LGW + T + YHSGSNG+GF+C QFD T G+VIMTN + G +W A+++ Sbjct: 278 SLAAGTIDTMLARQVESPSREPQKRPGGKNGIKTFRSLGWAIDQTPTGDIHYHSGSNGSGFKCYHQFDRATGSGIVIMTNSLGGLGLWDALIQ 370
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A7W1ZRE9_9BACT (Cyanophycinase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1ZRE9_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 3.370e-14 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 1 RHSLKSGTIENMLTPQI--------TLPDNED-RAR-GLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVW 237 +HSL + T++ MLT +LP+ E +AR GLGW ++ YHSGSNGTGFRC + F P T G+VIM NGVNG K+W Sbjct: 519 KHSLNAKTLDAMLTVSSNSKGNDAESLPNEEGGKARFGLGWRVEMRENGKRVYHSGSNGTGFRCYADFHPPTGNGIVIMANGVNGNKLW 607
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A7X7IPT7_9BACT (Beta-lactamase family protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7IPT7_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 2.080e-13 Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 4 HSLKSGTIENMLT-----------PQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 HSL TIE ML + + ++D GLGW + YH G+NG+GFRC ++FDP+ G+V+MTNG++G K+W+AV+E Sbjct: 353 HSLSRETIEKMLVRAFKADGRKPVKRCSPATSDDVYFGLGWQIDATPLGDRIYHGGTNGSGFRCYNEFDPRRGSGLVLMTNGLSGNKLWEAVVE 446
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Match: A0A2D5S999_9PLAN (PepX_C domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5S999_9PLAN) HSP 1 Score: 64.7 bits (156), Expect = 2.920e-10 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 34 MLTPQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTGFRCNSQFDPKTNVGVVIMTNGVNGRKVWQAVME 252 ML+P I+ D++D GLGW L+ +HSGSNG GFRC S+F P+ G+VIMTN ++G+++ QAV++ Sbjct: 932 MLSP-ISHRDDQDADWGLGWGLQELDGRQRVFHSGSNGAGFRCYSEFFPECGDGLVIMTNALSGKELRQAVID 1003 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82469.19278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82469.19278.1 >prot_M-pyrifera_M_contig82469.19278.1 ID=prot_M-pyrifera_M_contig82469.19278.1|Name=mRNA_M-pyrifera_M_contig82469.19278.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp RHSLKSGTIENMLTPQITLPDNEDRARGLGWVLKTGVTPVVAYHSGSNGTback to top mRNA from alignment at M-pyrifera_M_contig82469:657..908- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82469.19278.1 ID=mRNA_M-pyrifera_M_contig82469.19278.1|Name=mRNA_M-pyrifera_M_contig82469.19278.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig82469:657..908- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82469:657..908- >mRNA_M-pyrifera_M_contig82469.19278.1 ID=mRNA_M-pyrifera_M_contig82469.19278.1|Name=mRNA_M-pyrifera_M_contig82469.19278.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig82469:657..908- (Macrocystis pyrifera P11B4 male)back to top |