mRNA_M-pyrifera_M_contig82307.19250.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82307.19250.1
Unique NamemRNA_M-pyrifera_M_contig82307.19250.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A816AS39_9BILA (Hypothetical protein n=20 Tax=Bdelloidea TaxID=44578 RepID=A0A816AS39_9BILA)

HSP 1 Score: 74.7 bits (182), Expect = 2.860e-11
Identity = 88/325 (27.08%), Postives = 146/325 (44.92%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQ------------HERMS-VAVKEMAPNLVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFL-------TAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEA-LHDDLFRIL----IDRLQDHPRVARQSCFALLCLARVTAGEAE-----DEANA--LTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNF-IFERLNDAINAEVST 876
            EFW  + ++E E+Q             ER S    +   P LVP+ ++ +  +   E+ D+D++       G            L  +++ A+D +        +E     +W+ RE+ +MA    LE        D  + K +A+Q    F+ ELL          D N   RDT  + I  +    F+F+ +A ++D+L R L    ++RL D PRVA   C++   LAR     AE     D  N   L+   ++++K L++T DR D     LRNAA+EA+ E++  +    P+   + V+     + +RLN  I+AE  T
Sbjct:  282 EFWSNVCDEEYELQLLQQEAQDQNRQPERSSRYYARGALPYLVPVLLQRLTMQ---EETDDDDDWNPCKAAGVC----------LMLLANCAEDTIIQYVFPFVSENIKHTNWQHREAAVMAFGSMLEG------PDVASIKPIAEQSIP-FLLELLR---------DSNVAVRDTTAWTIGRI----FEFVSQAVMNDELLRALGNALVNRLADEPRVATNICWSFSSLARAAYDHAECPEDDDTPNTYLLSPFFDEIVKKLIETTDRPDGNQSNLRNAAYEALMEMIRHS----PKDCYVTVQKTTVTVLDRLNRVISAESHT 569          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A819YT04_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A819YT04_9BILA)

HSP 1 Score: 73.2 bits (178), Expect = 8.370e-11
Identity = 86/315 (27.30%), Postives = 141/315 (44.76%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEA-LHDDLFRI----LIDRLQDHPRVARQSCFALLCLARVTAGEAE-----DEANA--LTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNF-IFERLNDAINAE 867
            EFW  + ++E E+Q  +     +   P              LVP+ ++ +  +   E+AD+D++       G   +  +L      +I      F++A      DWR RE+ +MA    LE   +VS    +A + +       F+ ELL          DPN   RDT  + I  +    F+F+ +A + D+L R     L++ L D PRVA   C++   LAR     AE     D  N   L+   +D++K L++T DR D     LRNAA+EA+ E++  +    P+   + V+     + +RLN  I+ E
Sbjct:  223 EFWSNVCDEEYELQLLQQDAQEQNRQPERTNRYYARGALPYLVPVLLQRLTMQ---EEADDDDDWNPCKSAGVCLM--LLANCAENAIIPHVFPFVSAN-IKHTDWRHREAAVMAFGSMLEG-PDVSSIKPIAEQAIP------FLLELLR---------DPNIAVRDTTAWTIGRI----FEFVSQAVMTDELLRAIGSTLVNGLNDVPRVATNICWSFSSLARAAYDNAECSEDDDTPNTYLLSPFFDDIVKKLIETTDRTDGNQSNLRNAAYEALMEMIRHS----PKDCYVTVQKTTVTVLDRLNRVISVE 507          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A814DQI8_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814DQI8_ADIRI)

HSP 1 Score: 73.2 bits (178), Expect = 9.340e-11
Identity = 84/324 (25.93%), Postives = 141/324 (43.52%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERF-------SDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEA-LHDDLFRI----LIDRLQDHPRVARQSCFALLCLARVT---AGEAEDEANALTGSLND----LLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNFIFERLNDAINAEVST 876
            EFW  + ++E E+Q  +     +   P              LVP+ ++ +  +   E+ D+D++       G            L  +S+ A++ +T   F       +  DW+ RE+ +MA    LE        D  + K +A+Q    F+ +LL          DPN   RDT  + I  +    F+F+ +A +  D+ R+    L++ L D PRVA   C++   LAR T   A  ++D+    T  L+     ++K L+ T DR D     LRNAA+EA+ E++  +A    +    +      I +RLN  I+ E  T
Sbjct:  284 EFWSNVCDEEYELQLRQQEAQEQNRQPERTSRYYARGALQYLVPVLLQRLTMQ---EETDDDDDWNPCKAAGVC----------LMLLSNCAENAITQHVFPFVSGNINHADWKFREAAVMAFGSILEG------PDATSLKPVAEQAVP-FLLKLLQ---------DPNIAVRDTTAWTIGRI----FEFVSQAVMTSDMIRVIAEALVNGLNDLPRVATNICWSFSSLARATYEFAESSDDDDTPKTYLLSPYFEVIVKKLIATTDRPDGNQSNLRNAAYEALMEMIRHSA---KDCYNTVQSTTITILDRLNRVISVENQT 571          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A818USG6_9BILA (Hypothetical protein n=16 Tax=Rotaria TaxID=231623 RepID=A0A818USG6_9BILA)

HSP 1 Score: 71.6 bits (174), Expect = 3.090e-10
Identity = 85/318 (26.73%), Postives = 141/318 (44.34%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEA-LHDDLFRI----LIDRLQDHPRVARQSCFALLCLARVTAGEAE----DEAN---ALTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNF-IFERLNDAINAEVST 876
            EFW  + ++E E+Q  +     +   P              LVP+ ++ +  +   E+ D+D++       G   +  +L      +I      F++       DWR RE+ +MA    LE        D  + K +A+Q    F+ ELL          DPN   RDT  + I  +    F+F+ +A +++DL R     L++ L D PRVA   C++   LAR     AE    DE      L+   ++++K L++T DR D     LRNAA+EA+ E++  +    P+   + V+     + +RLN  I+ E  T
Sbjct:  334 EFWSNVCDEEYELQLLQQEAQEQNRQPERTSRYYARGALQYLVPVLLQRLTMQ---EETDDDDDWNPCKSAGVCLM--LLANCAENAIIQYVFPFVSTN-IKHTDWRHREAAVMAFGSMLEG------PDVASIKPIAEQAIP-FLLELLR---------DPNIAVRDTTAWTIGRI----FEFVSQAVMNEDLLRAIGSTLVNGLNDVPRVATNICWSFSSLARAAYDHAECSEDDETPNTYLLSPFFDEIVKKLIETTDRPDGNQSNLRNAAYEALMEMIRHS----PKDCYVTVQKTTVTVLDRLNRVISVESHT 621          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A0D9QF28_PLAFR (Importin N-terminal domain-containing protein n=58 Tax=Plasmodium TaxID=5820 RepID=A0A0D9QF28_PLAFR)

HSP 1 Score: 69.7 bits (169), Expect = 1.330e-9
Identity = 73/274 (26.64%), Postives = 117/274 (42.70%), Query Frame = 1
Query:    1 EFWIVIAEKEL-----EMQHERMSVAVKEMAPNLVPLFMECIQARDPEEDADEDEEQATLTVMGASALR---SVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEAL-----HDDLFRILIDRLQDHPRVARQSCFALLCLARVTAGEAEDEANALTGSLND----LLKVLVDTYDRDDAGVFGLRNAAFEAMNELL 771
            EFW  + E+E      E+Q  + +  + + A  +V L  +   A   +E  D D +  TL++  A+ L     +LK D +  +    +     E F  EDWR R++ ++A    +E        D    K + ++      E L           DP+   RDT  + I  +  +  + I   L      + L+ IL++RL D+PRVA   C+    LA           N+ T  L+D    L K L+D   R+DA    LR AAF A+N ++
Sbjct:  293 EFWNTVCEEETFIDQYELQEGKKNHNIVKQA--MVFLLPKIFNAMITQESEDLDIDAWTLSMASATFLALSAQLLKNDIVEPVISFVE-----ENFIHEDWRRRDAAVLAYGSIMEG------PDTEKLKPLVEESVGQLSEVLR----------DPSVSVRDTAAWTIGKITTYHSEIIYNVLGNYNDSNSLYGILLERLNDYPRVAANVCWVFNQLAANKRSSFNKMTNSCTTELDDSFCVLCKKLIDVSSREDADTRNLREAAFNALNVVI 543          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A098BVE9_9APIC (Putative importin beta (Fragment) n=7 Tax=Plasmodium TaxID=5820 RepID=A0A098BVE9_9APIC)

HSP 1 Score: 66.6 bits (161), Expect = 3.380e-9
Identity = 55/181 (30.39%), Postives = 78/181 (43.09%), Query Frame = 1
Query:  256 ERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEALH-----DDLFRILIDRLQDHPRVARQSCFALLCLARVTAGEAEDEANALTGSLND----LLKVLVDTYDRDDAGVFGLRNAAFEAMNELL 771
            E F  EDWR RE+ ++A    +E        D    K + K+      E L           DP+   RDT  + I  +  F  + I   L      + L+ IL++RL D+PRVA   C+    LA           N+ T  L+D    L K L+D   R+DA    LR AAF A+N ++
Sbjct:    6 ENFIHEDWRRREAAVLAYGSIMEG------PDTEKLKPLVKESVGQLSEVLR----------DPSVSVRDTAAWTIGKITTFHSEIIYNVLGSYNDTNSLYGILLERLNDYPRVAANVCWVFNQLAVNKKSSFNKVTNSYTTDLDDSFCVLCKKLIDVTSREDADTRNLREAAFNALNVVI 170          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A7I6IQ26_HALDI (Importin subunit beta-1-like n=5 Tax=Haliotis TaxID=6452 RepID=A0A7I6IQ26_HALDI)

HSP 1 Score: 67.8 bits (164), Expect = 5.760e-9
Identity = 81/318 (25.47%), Postives = 136/318 (42.77%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEALHDD----LFRILIDRLQDHPRVARQSCFALLCLARV------TAGE-AEDEANALTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNFIF-ERLNDAINAEVSTE 879
            EFW  + ++E+++  E    A +   P              L+P+ +  +  +D   + D+D+E       G   +      +    +      F+  E   + DWR R++ +MA    LE         G    ++ KQI ++ M +L+          DP+   RDT  + +  V     + +P+A+ +D    L + L++ L   PRVA   C+A   LA        TA E AE E   L+ S   +++ L+ T DR D     LRNAA+EA+ EL+      +P+   L V+    I  ERL   ++ E S +
Sbjct:  282 EFWSTVCDEEVDLAIELSEAAEQGRPPERTSMFYAKGALQYLIPVLLISLAKQD---EGDDDDEWNPCKAAGVCLMLMASCCED--EVVQYVLPFVQ-EMIDNPDWRNRDAAVMAFGSILE---------GPDPAKL-KQIVEHAMPKLISLLK------DPSVVVRDTAAWTVGRVC----EILPDAVINDHLPTLLQALVEGLSAEPRVASNVCWAFSSLAEAAFENAETADENAEPETYCLSASFEQIVQQLLQTTDRPDGNQHNLRNAAYEALMELVK----NSPKDCYLTVQKTTMIILERLERVLSMEGSVQ 569          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A813QLB5_9BILA (Hypothetical protein n=2 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813QLB5_9BILA)

HSP 1 Score: 67.8 bits (164), Expect = 5.780e-9
Identity = 83/318 (26.10%), Postives = 134/318 (42.14%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEALHDD-----LFRILIDRLQDHPRVARQSCFALLCLARVTAGEAE-----DEANA--LTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNF-IFERLNDAINAEVST 876
            EFW  + ++E E+Q  +   A +   P              LVP+ ++ +  +   E+ D+D++       G   L  +        I H+      +E     DWR RE+ +MA    +E        D  + K +A+Q    F+ ELL          D     RDT  + I  +    F+F+ +A+ DD     +   L+  L D PRVA   C++   LAR     AE     D  N   L+     +++ L+ T DR+D     LRNAA+EA+ E++  +    P+     V+     + ERLN+ I+ E  T
Sbjct:  284 EFWSNVCDEEYELQLMQQEAAEQNRQPERTSRYYARGALQYLVPVLLQRLTVQ---EETDDDDDWNPCKAAGV-CLMLLASCAENTIIQHVFP--FVSENIKHTDWRHREAAVMAFGSMMEG------PDVQSIKPIAEQAVP-FLIELL---------HDQRVAVRDTTAWTIGRI----FEFVSQAVMDDNLLRGILTALVAGLADVPRVATNICWSFSSLARAAYENAECPEDDDTPNTYILSQYFEGIVQKLILTTDRNDGNQSNLRNAAYEALMEMIRHS----PKDCYATVQRTTMTVLERLNNVISMESHT 571          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A0N7ZD08_SCYOL (Importin N-terminal domain-containing protein n=26 Tax=Decapoda TaxID=6683 RepID=A0A0N7ZD08_SCYOL)

HSP 1 Score: 67.0 bits (162), Expect = 1.040e-8
Identity = 75/283 (26.50%), Postives = 115/283 (40.64%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASA-LRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFIPEALHDD-----LFRILIDRLQDHPRVARQSCFALLCLARVTA-------GEAEDEANALTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELL 771
            EFW  + ++E+++  E    A     P              LVP+ M  +  +   E+AD+D+E       G    L +    D +  + H+       E    ++WR+R++ IMA    LE        D    K M +Q     +E L           D +   RDT  + +  V     + IP+A  +D     L   L+  L+  PRVA   C+AL  LA           G+ E     L+   + L+ VL+ T DR D     LRNAA+EA+ EL+
Sbjct:  282 EFWSNVCDEEVDLAIEASEAAELGRPPERTSRFYAKGALQYLVPVLMMTLSKQ---EEADDDDEWNPCKAAGVCIMLLATCTEDDI--VPHVLP--FVKENIKHQNWRLRDAAIMAFGSILEG------PDPTNLKPMVEQAMPTLIEALN----------DESVVVRDTTAWTLGRVC----ELIPDAACNDTYLKLLLEALVHSLKGEPRVASNVCWALSSLAEAAYEQADTGDGDGEPPTYCLSAFFDPLVDVLLQTTDRADGNQCNLRNAAYEALMELM 537          
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Match: A0A814VNU7_9BILA (Hypothetical protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A814VNU7_9BILA)

HSP 1 Score: 66.6 bits (161), Expect = 1.410e-8
Identity = 82/312 (26.28%), Postives = 136/312 (43.59%), Query Frame = 1
Query:    1 EFWIVIAEKELEMQHERMSVAVKEMAPN-------------LVPLFMECIQARDPEEDADEDEEQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTIMAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPNPQARDTNTFVIAIVIRFFFDFI-PEALHDDLFRILIDRLQDHPRVARQSCFALLCLARVTAGEAE---DEANA-----LTGSLNDLLKVLVDTYDRDDAGVFGLRNAAFEAMNELLAAAAVGAPEPRELLVEFLNF-IFERLNDAINAE 867
            EFW  + ++E E+Q  +     +   P              LVP+ ++ +  +  EE  DED+            L +    D +  I H+   F+TA   +  DW+ RE+ +MA    LE        D  + K + +Q    F+ +LL          D N   RDT  + I  + +F    +  + L  ++ + L++ L D PRVA   C++   LA      AE   DE +      L+   +D++K L++T DR D     LRNAA+EA+ E++  +    P+   + V+     I +RLN  I+ E
Sbjct:  321 EFWSNVCDEEYELQILQQEAQEQNRQPERTSRYYARGALQYLVPVLLQRLTMQ--EESDDEDDWNPFKAAGVCLMLLANCAEDAI--IPHVLP-FITAN-INHADWKYREAAVMAFGSMLEG------PDAASIKPVVEQAIP-FLLQLLR---------DSNIAVRDTTAWTIGRIFKFVTQAVLTDGLIGEIGKTLVNGLNDVPRVATNICWSFSSLASAAYEHAESLDDEDDTPKTYLLSPFFDDIVKKLIETTDRPDGNQSNLRNAAYEALMEMIRYS----PKDCYVTVQKTTLTIVDRLNRVISIE 606          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82307.19250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A816AS39_9BILA2.860e-1127.08Hypothetical protein n=20 Tax=Bdelloidea TaxID=445... [more]
A0A819YT04_9BILA8.370e-1127.30Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A814DQI8_ADIRI9.340e-1125.93Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]
A0A818USG6_9BILA3.090e-1026.73Hypothetical protein n=16 Tax=Rotaria TaxID=231623... [more]
A0A0D9QF28_PLAFR1.330e-926.64Importin N-terminal domain-containing protein n=58... [more]
A0A098BVE9_9APIC3.380e-930.39Putative importin beta (Fragment) n=7 Tax=Plasmodi... [more]
A0A7I6IQ26_HALDI5.760e-925.47Importin subunit beta-1-like n=5 Tax=Haliotis TaxI... [more]
A0A813QLB5_9BILA5.780e-926.10Hypothetical protein n=2 Tax=Didymodactylos carnos... [more]
A0A0N7ZD08_SCYOL1.040e-826.50Importin N-terminal domain-containing protein n=26... [more]
A0A814VNU7_9BILA1.410e-826.28Hypothetical protein n=7 Tax=Adineta steineri TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82307contigM-pyrifera_M_contig82307:1..885 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score93.2
Seed ortholog evalue2.2e-16
Seed eggNOG ortholog13333.ERM97413
KEGG koko:K14293
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000060,GO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005737,GO:0005783,GO:0005829,GO:0006606,GO:0006607,GO:0006610,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007079,GO:0007080,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008092,GO:0008104,GO:0008139,GO:0008150,GO:0008565,GO:0009987,GO:0010494,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019894,GO:0019899,GO:0019904,GO:0022402,GO:0022607,GO:0023052,GO:0030953,GO:0031072,GO:0031090,GO:0031122,GO:0031291,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0035556,GO:0035770,GO:0036464,GO:0040001,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0046907,GO:0048285,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051225,GO:0051234,GO:0051276,GO:0051293,GO:0051303,GO:0051305,GO:0051310,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051716,GO:0051879,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071782,GO:0071840,GO:0072594,GO:0090307,GO:0097435,GO:0098813,GO:0098827,GO:0140014,GO:1902850,GO:1903047,GO:1990904
EggNOG free text desc.ribosomal protein import into nucleus
EggNOG OGs37NAJ@33090,3GG89@35493,COG5215@1,KOG1241@2759
COG Functional cat.U
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036
Exons1
Model size885
Cds size885
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816730.077704-CDS-M-pyrifera_M_contig82307:0..8851622816730.077704-CDS-M-pyrifera_M_contig82307:0..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82307 1..885 +
1692278144.7393024-CDS-M-pyrifera_M_contig82307:0..8851692278144.7393024-CDS-M-pyrifera_M_contig82307:0..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82307 1..885 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82307.19250.1prot_M-pyrifera_M_contig82307.19250.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82307 1..885 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82307.19250.1

>prot_M-pyrifera_M_contig82307.19250.1 ID=prot_M-pyrifera_M_contig82307.19250.1|Name=mRNA_M-pyrifera_M_contig82307.19250.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
EFWIVIAEKELEMQHERMSVAVKEMAPNLVPLFMECIQARDPEEDADEDE
EQATLTVMGASALRSVLKLDGLRSISHLADDFLTAERFSDEDWRIRESTI
MAMSLALEALAEVSDADGVAAKRMAKQICDNFMEELLVRCDENAERFDPN
PQARDTNTFVIAIVIRFFFDFIPEALHDDLFRILIDRLQDHPRVARQSCF
ALLCLARVTAGEAEDEANALTGSLNDLLKVLVDTYDRDDAGVFGLRNAAF
EAMNELLAAAAVGAPEPRELLVEFLNFIFERLNDAINAEVSTEGE
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mRNA from alignment at M-pyrifera_M_contig82307:1..885+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82307.19250.1 ID=mRNA_M-pyrifera_M_contig82307.19250.1|Name=mRNA_M-pyrifera_M_contig82307.19250.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig82307:1..885+ (Macrocystis pyrifera P11B4 male)
GAGTTTTGGATTGTCATTGCAGAGAAGGAACTCGAAATGCAGCATGAACG AATGAGCGTTGCTGTGAAGGAAATGGCACCAAACTTGGTTCCATTGTTCA TGGAATGCATCCAAGCAAGAGATCCTGAGGAGGATGCAGATGAGGATGAG GAGCAAGCCACTCTGACTGTCATGGGTGCAAGTGCATTGCGCTCTGTTCT CAAGTTAGATGGGCTTCGCTCCATCTCACACCTTGCGGATGACTTCCTCA CTGCCGAGCGGTTTTCTGATGAAGACTGGAGAATCCGGGAATCCACTATA ATGGCAATGAGTCTTGCTCTGGAAGCACTCGCTGAGGTTTCTGACGCTGA TGGTGTTGCTGCAAAGAGGATGGCAAAACAAATTTGTGACAATTTCATGG AGGAGTTGCTGGTGCGATGTGATGAAAACGCGGAGCGGTTTGATCCCAAT CCACAAGCACGGGACACAAACACGTTTGTCATTGCAATTGTGATTCGATT CTTTTTCGACTTCATTCCTGAAGCTTTGCATGATGATCTCTTCCGCATTT TGATCGATCGCCTGCAAGATCATCCACGAGTTGCGCGACAATCTTGCTTT GCGCTGCTGTGCCTTGCTCGTGTGACTGCAGGTGAAGCAGAAGACGAAGC CAACGCATTGACTGGAAGCTTGAATGATTTGCTAAAGGTGCTGGTGGATA CATACGACCGTGATGATGCAGGAGTATTTGGATTACGCAATGCTGCTTTT GAAGCTATGAATGAACTGCTTGCAGCTGCTGCTGTCGGAGCTCCAGAACC ACGAGAACTCTTGGTGGAATTCCTCAACTTTATCTTTGAACGCCTCAACG ATGCAATCAATGCTGAAGTTTCCACCGAAGGAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82307:1..885+

>mRNA_M-pyrifera_M_contig82307.19250.1 ID=mRNA_M-pyrifera_M_contig82307.19250.1|Name=mRNA_M-pyrifera_M_contig82307.19250.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig82307:1..885+ (Macrocystis pyrifera P11B4 male)
GAGTTTTGGATTGTCATTGCAGAGAAGGAACTCGAAATGCAGCATGAACG
AATGAGCGTTGCTGTGAAGGAAATGGCACCAAACTTGGTTCCATTGTTCA
TGGAATGCATCCAAGCAAGAGATCCTGAGGAGGATGCAGATGAGGATGAG
GAGCAAGCCACTCTGACTGTCATGGGTGCAAGTGCATTGCGCTCTGTTCT
CAAGTTAGATGGGCTTCGCTCCATCTCACACCTTGCGGATGACTTCCTCA
CTGCCGAGCGGTTTTCTGATGAAGACTGGAGAATCCGGGAATCCACTATA
ATGGCAATGAGTCTTGCTCTGGAAGCACTCGCTGAGGTTTCTGACGCTGA
TGGTGTTGCTGCAAAGAGGATGGCAAAACAAATTTGTGACAATTTCATGG
AGGAGTTGCTGGTGCGATGTGATGAAAACGCGGAGCGGTTTGATCCCAAT
CCACAAGCACGGGACACAAACACGTTTGTCATTGCAATTGTGATTCGATT
CTTTTTCGACTTCATTCCTGAAGCTTTGCATGATGATCTCTTCCGCATTT
TGATCGATCGCCTGCAAGATCATCCACGAGTTGCGCGACAATCTTGCTTT
GCGCTGCTGTGCCTTGCTCGTGTGACTGCAGGTGAAGCAGAAGACGAAGC
CAACGCATTGACTGGAAGCTTGAATGATTTGCTAAAGGTGCTGGTGGATA
CATACGACCGTGATGATGCAGGAGTATTTGGATTACGCAATGCTGCTTTT
GAAGCTATGAATGAACTGCTTGCAGCTGCTGCTGTCGGAGCTCCAGAACC
ACGAGAACTCTTGGTGGAATTCCTCAACTTTATCTTTGAACGCCTCAACG
ATGCAATCAATGCTGAAGTTTCCACCGAAGGAGAGGAGTTTTGGATTGTC
ATTGCAGAGAAGGAACTCGAAATGCAGCATGAACGAATGAGCGTTGCTGT
GAAGGAAATGGCACCAAACTTGGTTCCATTGTTCATGGAATGCATCCAAG
CAAGAGATCCTGAGGAGGATGCAGATGAGGATGAGGAGCAAGCCACTCTG
ACTGTCATGGGTGCAAGTGCATTGCGCTCTGTTCTCAAGTTAGATGGGCT
TCGCTCCATCTCACACCTTGCGGATGACTTCCTCACTGCCGAGCGGTTTT
CTGATGAAGACTGGAGAATCCGGGAATCCACTATAATGGCAATGAGTCTT
GCTCTGGAAGCACTCGCTGAGGTTTCTGACGCTGATGGTGTTGCTGCAAA
GAGGATGGCAAAACAAATTTGTGACAATTTCATGGAGGAGTTGCTGGTGC
GATGTGATGAAAACGCGGAGCGGTTTGATCCCAATCCACAAGCACGGGAC
ACAAACACGTTTGTCATTGCAATTGTGATTCGATTCTTTTTCGACTTCAT
TCCTGAAGCTTTGCATGATGATCTCTTCCGCATTTTGATCGATCGCCTGC
AAGATCATCCACGAGTTGCGCGACAATCTTGCTTTGCGCTGCTGTGCCTT
GCTCGTGTGACTGCAGGTGAAGCAGAAGACGAAGCCAACGCATTGACTGG
AAGCTTGAATGATTTGCTAAAGGTGCTGGTGGATACATACGACCGTGATG
ATGCAGGAGTATTTGGATTACGCAATGCTGCTTTTGAAGCTATGAATGAA
CTGCTTGCAGCTGCTGCTGTCGGAGCTCCAGAACCACGAGAACTCTTGGT
GGAATTCCTCAACTTTATCTTTGAACGCCTCAACGATGCAATCAATGCTG
AAGTTTCCACCGAAGGAGAG
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