prot_M-pyrifera_M_contig82234.19229.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82234.19229.1
Unique Nameprot_M-pyrifera_M_contig82234.19229.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length304
Homology
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A1G0G7U0_9GAMM (SSD domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G7U0_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 3.430e-47
Identity = 111/307 (36.16%), Postives = 166/307 (54.07%), Query Frame = 0
Query:    1 FFRSVVLALCVACGIGLSVLYALXXXXXXXXXINLLTLLLLPLVFCVGLTTAVHLFSRRAGERWDYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLVTRGRPLPPL-RGYTPAIAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVSGYGLQRLTRFAGPAAL--LGGTFFNADQRATRITLRIRNLGGRPYDAIAADVAAIWAAADTRG 304
            F RS V+  CV  GIG+S+   L          NLLTL+L PL+F +G+TTA+H FSRR G  WD   A     RP+ IA VT+ +GC  F  +PQ ++  MGIV P G+  +FV  ++FVP+   L+     LP L R  + A      + + + L   A+ A  LLPR+   PDA++FF DDS +I+SY  IE  L G+LV D+V+   NDG  +  + N  ++R V++  R +P ++ +++   L  L  +     +  L   + + D+   R+T R RN+ G PY     D+  +W  +  RG
Sbjct:  218 FLRSPVVVTCVMTGIGISLFCTLAFASGMDIQFNLLTLILYPLIFYMGITTAIHFFSRRDGGVWDLELAYAKTFRPSLIAMVTSVIGCCGFVFSPQTIMRDMGIVFPVGIFITFVVMMVFVPAAWCLLAGNGNLPCLPRAASSATVSSRSKGISLCLFAAAIVAVLLLPRLRTEPDAIYFFRDDSELIQSYRFIEDRLAGLLVMDMVVET-NDGTAITTEKNIVQIRGVVNNARSLPGLTTIITP--LDWLDGYREEVIMPELKQAYISGDKSKLRLTFRFRNISGSPYSGHMTDLKRLWNESAHRG 521          
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A7C1YYM5_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1YYM5_9GAMM)

HSP 1 Score: 174 bits (442), Expect = 5.080e-46
Identity = 111/273 (40.66%), Postives = 158/273 (57.88%), Query Frame = 0
Query:   37 TLLLLPLVFCVGLTTAVHLFSRRAGERW--DYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLVTRGRPLPPLRGYTPA---IAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVSGYGLQRLTRFAGPAALLGGTFFNADQRATRITLRIRNLGGRPYDAIAADVAAIWAAADTRG 304
            TL+L PL+FCVGLTTA+H FSRR   RW  D+AYA   + RPA +A  TTA+G  AF  APQP I  MGI+LP G++ ++VS +LF P+L R ++ G  LPP R    A   + PR RR V + L   ALG+A L   I +NPDA+FFF  DS ++RSY +IE  L G++  +L+I     G +V+D     ++   +  +  +P +++  SG  L+       PA L        D+RA RI+L  RNL  + +  +  D+   WA+ +  G
Sbjct:  269 TLILFPLLFCVGLTTAIHFFSRRQNGRWTPDHAYA--RVLRPATMAMATTAIGTGAFLFAPQPAIRDMGILLPLGIVLTYVSVMLFTPALFRWISGGWRLPPARHGQAADSPLGPRLRRGVSLLLAAAALGSAFLAGNIRINPDAIFFFQPDSELVRSYRQIEDRLVGLMTVELMITAAP-GTSVLDAERRGRIESFLAAIDGMPSLTSRASGLDLR------SPAYLA------EDRRALRISLHYRNLASQDFSRVERDLRRNWASVNGEG 526          
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A3M1DPZ8_9GAMM (SSD domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DPZ8_9GAMM)

HSP 1 Score: 167 bits (424), Expect = 1.420e-43
Identity = 110/303 (36.30%), Postives = 158/303 (52.15%), Query Frame = 0
Query:    1 FFRSVVLALCVACGIGLSVLYALXXXXXXXXXINLLTLLLLPLVFCVGLTTAVHLFSRRAGERWDYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLVTRGRPLPPLRGYTPAIAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVSGYGLQRLTRFA-GPAALLGGTFFNADQRATRITLRIRNLGGRPYDAIAADVAAIWAAADT 302
            F RS   ++ V    GL + Y L         +NL  L++ PL+FCV +T A+HLFS   G   +    +  + RPA IA +TT LG      APQ  + + G VLP G+  +F   LLF+P+  RL+  G  LPPL    PA  P  R+ VG+ L++    +   LPR+  +PDA+ FF +DSPV R Y  IE  L G+ V D VI    +G  + D  N A++   +  L R+P ++ V+ G G ++L+    GP   L   F + D R+ R+TL  R +GG  Y A+   V   W A +T
Sbjct:  207 FLRSWQASVAVLAASGLGLWYTLIWAGLLGYSLNLPMLVVFPLLFCVAVTLAIHLFSGHGGRERELPEVLPRLLRPALIAMLTTLLGSLTLLLAPQRALYQAGAVLPVGIGVTFALVLLFMPAAYRLLRGGWTLPPLVARPPASGPLSRQLVGLGLLLATAASLFALPRLQTDPDALNFFPEDSPVTRGYDYIEHRLCGLFVIDAVI-TAREG-RLTDPENGARIGRFLQRLARLPRLTTVLPGAGWRQLSDIVDGPGRQLRDAFLSDDGRSLRLTLHFREVGGDGYLAVERSVREAWQAGET 507          
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A2N1XP51_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XP51_9GAMM)

HSP 1 Score: 160 bits (406), Expect = 4.830e-41
Identity = 108/285 (37.89%), Postives = 152/285 (53.33%), Query Frame = 0
Query:    9 LCVACGIGLSVLYALXXXXXXXXXINLLTLLLLPLVFCVGLTTAVHLFSRRAGERWDYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLVTRGRPLPPLRGYTPAIAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVSGYGLQRLTRFAGPAALLGGTFFNADQRATRITLRIRNLGGRPYDAIAADV 293
            L V  GI LS+++ L         + LL+L++ PLVFCVGLTTA+HLFS+     W  A A H I +PA IA +TTA+GCA+FA APQ  +A MG+VLP  V+ SF+ TL   P+L  L+ + R L   R       PR RR +   L+  A  AA L   I  NPDA +FF  DS V++SY  IE  LTG+L  +L++    D   + +      +   + +LR++P +++ VS +    LT        +  +  N      RITLR +N  G  Y    A +
Sbjct:  226 LSVFAGIALSLVFTLALAGAWGLKMTLLSLIIFPLVFCVGLTTAIHLFSKTTEGVWQAADAYHKIRKPAFIAMLTTAIGCASFAFAPQMTVADMGLVLPVAVILSFLCTLFVTPALFVLIDKNRILADSRRKQLNPLPRLRRWLSWMLLAGAAAAAYLALDIKTNPDAFYFFKPDSDVVKSYQLIENQLTGLLAIELILHS-EDRHKLTEAPLRPAIAAWLTQLRKLPGLTSAVSVFDALSLTSADNLPDDIRKSLLNEQATEARITLRFKNSAGFHYQETLAQI 509          
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A1G3AU24_9BACT (Uncharacterized protein n=3 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3AU24_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 3.720e-7
Identity = 61/264 (23.11%), Postives = 116/264 (43.94%), Query Frame = 0
Query:    2 FRSVVLALCVACGIGLSVLYALXXXXXXXXXINLLTLLLLPLVFCVGLTTAVHLFSRRAGE-------RWDYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLV---------------TRGRPLPPLRGYTPAIAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVS 243
            FR++   L  A  I +++++A+          N+++ +++PL+F + LTT VH+ +R   E       R      + HI  P  +  +TTA+G  +   +    +   GI +  G++ SF   +  VP +L L                T  R    + G+      +    + +  +V    A   + +     +    F ++S + RS   IE++L G+L  ++VI  VN G     +   AK+ ++ D L+ IPE++  +S
Sbjct:  248 FRNISGVLIPAITISINIIWAVGLFVIFNNKTNMVSGMIIPLIFIISLTTTVHILNRFYQEVKLTGDSRKSTLETVKHICVPCFLMCLTTAIGFLSLMVSDVTPVKITGIFMAAGIMMSFFVCITLVPCILSLFPGLMSSSATIQKDDGTSNREFRGIYGFIGRFVKKNTIYILILSLVFVGFAIYGITKTRAESNVFESFPENSEISRSTKHIEQNLMGLLPMEIVINAVNGGGVFQPEV-LAKMENLQDYLKEIPEVTKSMS 510          
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Match: A0A7K3WLI6_9FLAO (RND family transporter n=1 Tax=Cryomorpha ignava TaxID=101383 RepID=A0A7K3WLI6_9FLAO)

HSP 1 Score: 59.3 bits (142), Expect = 3.740e-6
Identity = 59/227 (25.99%), Postives = 109/227 (48.02%), Query Frame = 0
Query:   33 INLLTLLLLPLVFCVGLTTAVHLFSRRAGERWD---YAYAIHHIARPAAIAA----VTTALGCAAFAAAPQPVIARMGIVLPCGVLFSFVSTLLFVPSLLRLVT---------RGRPLPPLRGYTPAIAPRGRRRVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGMLVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVS 243
            I++L  +L P++F VG++ AVHL+SR   E  D    A+AIH +     +AA    +TTA+G A+      P +   G++   GV+ ++V ++  +P+ L L           +G     L G    I  R R+ V +  +V+ALG      R+ LN   +     D P+ + +A  + +  G+   +L +++    D+ +   N  K+  + + L+    + A++S
Sbjct:  253 ISILLNMLPPVIFVVGMSDAVHLYSRFLEELRDGATKAHAIHQMIFDTGLAALFTSITTAIGFASLYLTGIPALQEFGVITASGVIAAYVISITMLPAWLVLTEPPHKVINNEKGNWQRQLDGILIPII-RHRKWVFIGTIVIALGFGFAASRLELNNFILEDLKPDEPLRKDFAFFDVNFAGVRPFELGLKLKEQDDSFLTPQNIGKLNKLENYLKSTYGVHAILS 478          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82234.19229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A1G0G7U0_9GAMM3.430e-4736.16SSD domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A7C1YYM5_9GAMM5.080e-4640.66Uncharacterized protein n=1 Tax=Sedimenticola sp. ... [more]
A0A3M1DPZ8_9GAMM1.420e-4336.30SSD domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A2N1XP51_9GAMM4.830e-4137.89Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A1G3AU24_9BACT3.720e-723.11Uncharacterized protein n=3 Tax=unclassified Planc... [more]
A0A7K3WLI6_9FLAO3.740e-625.99RND family transporter n=1 Tax=Cryomorpha ignava T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10coord: 1..134
e-value: 3.3E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR33406:SF2coord: 69..245
coord: 1..133
NoneNo IPR availablePANTHERPTHR33406FAMILY NOT NAMEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR33406FAMILY NOT NAMEDcoord: 69..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..103
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 1..130
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 5..25
NoneNo IPR availableTMHMMTMhelixcoord: 152..171
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82234contigM-pyrifera_M_contig82234:3..914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82234.19229.1mRNA_M-pyrifera_M_contig82234.19229.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82234 3..914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82234.19229.1 ID=prot_M-pyrifera_M_contig82234.19229.1|Name=mRNA_M-pyrifera_M_contig82234.19229.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=304bp
FFRSVVLALCVACGIGLSVLYALAVCMALGLTINLLTLLLLPLVFCVGLT
TAVHLFSRRAGERWDYAYAIHHIARPAAIAAVTTALGCAAFAAAPQPVIA
RMGIVLPCGVLFSFVSTLLFVPSLLRLVTRGRPLPPLRGYTPAIAPRGRR
RVGMALVVLALGAAALLPRITLNPDAMFFFADDSPVIRSYARIERDLTGM
LVADLVIRVVNDGDTVVDDANTAKVRHVIDELRRIPEMSAVVSGYGLQRL
TRFAGPAALLGGTFFNADQRATRITLRIRNLGGRPYDAIAADVAAIWAAA
DTRG
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