mRNA_M-pyrifera_M_contig82233.19228.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82233.19228.1
Unique NamemRNA_M-pyrifera_M_contig82233.19228.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A0S8CJP3_9BACT (HlyD_D23 domain-containing protein n=1 Tax=Nitrospira bacterium SG8_3 TaxID=1704023 RepID=A0A0S8CJP3_9BACT)

HSP 1 Score: 291 bits (745), Expect = 2.460e-94
Identity = 152/293 (51.88%), Postives = 213/293 (72.70%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALP 879
            E+AAGT++AK ET+IS  ITA I  + VRAGD V+ G+ L +LD+REL+ARV Q R+ V AA A+LA A +D+ER++ I+   P A+S+SD+D   A+LR A+A+  G+++  DEA T LSY+ + API+G ++ER+ADPGDTA  G  LL++Y+P  LRLEA VRE++A+++  G  L+  +DALD    + VEEIVPSADPGSR+FLVKV L  +  LYPGMFGRLLIP  + ++ Y+P  AV ++GQL FV+  + +G VRRYVR GA     R++V+SGL  G+++ +P
Sbjct:   49 EQAAGTIRAKVETVISPIITAKISTISVRAGDEVKRGEVLAELDSRELEARVGQARQAVVAAKAKLALAEKDSERLQRIYRAEPGAISKSDMDRVQASLRTARAQLVGSQRQEDEAKTALSYSTLAAPISGRIVERYADPGDTARQGQALLRMYDPDTLRLEASVRESVASKLTRGQSLKARVDALDEVFQAEVEEIVPSADPGSRSFLVKVGLKGSSGLYPGMFGRLLIPIGQTKKIYIPLKAVTQVGQLHFVIVKTERGDVRRYVRLGARADPDRVQVISGLSAGEKILVP 341          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A6J4WY14_9DELT (HlyD_D23 domain-containing protein n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4WY14_9DELT)

HSP 1 Score: 281 bits (719), Expect = 3.250e-90
Identity = 151/294 (51.36%), Postives = 208/294 (70.75%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALPE 882
            ERAAGT++AK ET+IS  I+ATI ++ V AGD VQ G+ LV+LDAREL ARV Q  + V +A A L +  ++ +R++ IF   P A+S+++ D    AL   +A++  +K+  DEA T LSY+ + +PI G +++R+ADPGDTA PG P+L+LYNP+ LRLE  VRE++A+++     L   IDALD   D VV+EIVPSADPGSR FLVKV+L  +  LYPGMFGRLLIP  + E+ Y+P  AV  +GQL+FV+  + QG VRRYVR G   +D R+EV+SGL+ G++V L +
Sbjct:   60 ERAAGTLRAKVETVISPLISATISSITVWAGDEVQPGEVLVNLDARELKARVDQAHQAVVSARAMLTQTEKEAKRVQRIFKADPGAISKAERDRIQTALSTTRAQHVSSKRHEDEARTALSYSKLTSPIAGRIVDRYADPGDTARPGVPVLRLYNPATLRLETSVRESVASKLKENQNLTAEIDALDKRFDGVVDEIVPSADPGSRTFLVKVSLTGDVGLYPGMFGRLLIPIGQIEKIYIPTAAVTHVGQLDFVIVKTEQGAVRRYVRLGQRGSDERIEVVSGLKAGEQVLLKQ 353          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A0A0DJG1_9SPIO (HlyD_D23 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A0A0DJG1_9SPIO)

HSP 1 Score: 278 bits (712), Expect = 1.800e-89
Identity = 152/292 (52.05%), Postives = 206/292 (70.55%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVAL 876
            ERAAGT++AK ET+IS  I+ATI ++ V AGD VQ G  LVDLDAREL ARV Q  + V +A A L +  ++ +R++ IF   P A+S+++ D    AL   +A+   AK+  DEA T LS++ + +PI G ++ER+ADPGDTA  G P+L+LYNP+ LRLE  VRE++A+++     L   IDAL    + VV+EIVPSADPGSR FLVKV+L  ++ LYPGMFGRLLIP  + E+ Y+P  A  R+GQL+FV+  S QG VRRYVR G  + DGR+EV+SGL+PG++V +
Sbjct:   40 ERAAGTLRAKVETVISPLISATISSIAVWAGDEVQPGDVLVDLDARELKARVDQAHQAVISAQAILTRTEKEAKRVQRIFKADPGAISKAERDRIQTALSTGRAQLVSAKRFEDEAKTALSHSQLTSPIAGRIVERYADPGDTARLGVPVLRLYNPATLRLETSVRESVASKLKENQDLIAEIDALGKRYEGVVDEIVPSADPGSRTFLVKVSLTGDEGLYPGMFGRLLIPIGQIEKIYIPTVAATRVGQLDFVVVKSEQGAVRRYVRLGEPKVDGRIEVVSGLKPGEQVLV 331          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A7Y3DQB0_9DELT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3DQB0_9DELT)

HSP 1 Score: 278 bits (711), Expect = 4.780e-89
Identity = 154/294 (52.38%), Postives = 204/294 (69.39%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALPE 882
            E+AAGT+ AK ET+IS  ITATI ++ V +GD V+ G+ LV LD+REL ARV Q  + V AA ARL +  +D  RI+ I      AVSR++ D    AL  AQAE  G ++  DEA T LSY+ + API G ++ER ADPGDTA  G PLL++Y+P+ LRLEA VRE++A+++ IG RL   +DAL      V++EIVPSADPGSR+FLVKV+L     LYPGMFGRL+IP  + E+ Y+P  AV  +GQL+FV+  + QG VRRYVR G   +D R+EV+SGL PG++V + +
Sbjct:   60 EQAAGTLHAKVETVISPLITATISSMGVWSGDDVKAGEMLVTLDSRELKARVDQAHQAVVAAKARLTQTEKDLGRIQRIMKADSGAVSRAERDRMQTALNTAQAELLGLRRRRDEAKTELSYSKLTAPIAGRIVERLADPGDTARKGEPLLRMYDPATLRLEASVRESVASKLAIGHRLTAEVDALKKKYPVVIDEIVPSADPGSRSFLVKVSLTGGAGLYPGMFGRLMIPIGKLEKIYIPLTAVIPVGQLDFVIVKTEQGAVRRYVRLGQRSSDDRVEVISGLAPGEQVLIAD 353          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A7V7DXD0_9DELT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7DXD0_9DELT)

HSP 1 Score: 261 bits (668), Expect = 1.480e-82
Identity = 146/292 (50.00%), Postives = 202/292 (69.18%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVAL 876
            E+AAGTV+AK ET+IS  +TA I ++ VR+GD+V+ G  LV LD+REL ARV Q  + + AA AR  +A ++ +R + I+     AVS+S +D   +   AA+AE   A++  DEA T LS++ + API+G V+ER+A+PGDTA  G PLL+LY+P  LRLEA VRE++A+++    RL   IDA+D    SV++EIVPSADPGSR+FLVKV L     L+PGMFGRLLIP  + ++ YVP  AV R+GQL+FV+  S +G  RRYVR G    D R++V+SGL  G+ + +
Sbjct:   60 EKAAGTVRAKVETVISPLVTARISSISVRSGDQVKKGAVLVQLDSRELKARVDQAHQEMIAAKARYDQAEKEYKRFQNIYKAGGGAVSKSKLDQVESVYTAARAELTRARRQEDEAETALSHSTLKAPISGRVVERYAEPGDTAGQGVPLLRLYDPDSLRLEASVRESVASKLSKAQRLTTEIDAIDKRFTSVLDEIVPSADPGSRSFLVKVDLKDKSGLFPGMFGRLLIPIGQTKKIYVPIEAVTRVGQLDFVIVKSEKGPTRRYVRLGTAEDD-RVQVVSGLSQGEEILV 350          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A3A4WZI4_9DELT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4WZI4_9DELT)

HSP 1 Score: 258 bits (658), Expect = 4.470e-81
Identity = 139/290 (47.93%), Postives = 196/290 (67.59%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRV 870
            E+AAGT++AK ET+IS  ITA + ++ VR GD V+ G  LV LD+REL AR+ Q  + V AA A   +A +D +R++ I+   P A+S++++D   AA+  A+A+    ++  DE  T   ++ I API+G ++ R+ADPGDTA  G PLL +Y+P  LRLEA VRE++A+ +     L   +DA++   D VV+EIVPSADPGSR+F+VKV L    SLYPGMFGRLLIP+   E+ Y+P  AV  +GQL+FV+  S QG  RR+VR G  + + R+EV+SGL PGD +
Sbjct:   60 EQAAGTLRAKIETVISPLITAAVSSIAVRPGDEVKEGDVLVKLDSRELKARLDQAHQGVAAAKAGFEQAEKDYQRVQRIYKADPGAISKAELDRIGAAMETARADLMRLQRQEDEVKTAFGFSTISAPISGRIVNRYADPGDTARKGEPLLGMYDPGSLRLEASVRESVASSLSKAQELIAEVDAVNRRFDGVVDEIVPSADPGSRSFIVKVRLKGEYSLYPGMFGRLLIPTGHIEKMYIPEKAVTNVGQLDFVMVKSHQGPTRRFVRLGGRKGEDRIEVISGLSPGDII 349          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: UPI0008D984D7 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008D984D7)

HSP 1 Score: 244 bits (622), Expect = 1.220e-75
Identity = 136/291 (46.74%), Postives = 191/291 (65.64%), Query Frame = 1
Query:    7 AAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALP 879
            A GTV+A+ E ++S RITA I  VHVRAGD V+ G  LV+LD R+L++R+ Q R+   AA ARL +A +  +R++ ++                       AE A A   V+EA T LS+  I AP+ G VI+R A+PGDTA PG PLL++Y+P  L+L+A+VRE++A R+  G  L   IDA+D  L+  ++EIVPSA+PGSR F+V+  LP + +LYPGMFGRL+I +   +R  VPA A+ R+GQLEFV   + +G VRR++RTG    DGR+EV+SGL  G+R+ +P
Sbjct:   64 APGTVEARHEAVLSPRITARITAVHVRAGDAVEAGAVLVELDERDLESRLRQTRDRAAAAQARLDEAERHFQRMRDLYERXXXXXXXXXXXXXXXXXX--XAELARASDAVEEARTALSHATIRAPMTGRVIDRLAEPGDTARPGVPLLRIYDPGSLQLDAHVRESIAARMERGQSLNARIDAVDANLEVTIKEIVPSAEPGSRTFIVRAGLPGHANLYPGMFGRLIIVTGSEQRIEVPAAAIERVGQLEFVRVVTERGPVRRHIRTGETTPDGRVEVMSGLVAGERIVIP 352          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A3M0Y1I1_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0Y1I1_9PROT)

HSP 1 Score: 244 bits (623), Expect = 3.380e-75
Identity = 140/294 (47.62%), Postives = 194/294 (65.99%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFV-LADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALP 879
            E A+GTV +   T++++R+ A I  V VRAGD V  G  +V L+++++ ARVAQ R+ + AA ARLA AR +  R++ +F       +R   D ALA L+AA AE    KQ++ EA T LS+T I AP++G VI+R A+PG+TA PG PLL++Y+P  LR+EA VRETLA R+ +G RLR+ I AL+   +  +EEIVP A+PG+R  LVKV LP       GMF R+ +P+ +  R  +P  A+ R+GQLEFV + D AQG+ RR V TG +R   R+EVLSGL  G+ V +P
Sbjct:  107 EWASGTVASATRTVVASRLLARIEEVRVRAGDTVAKGDVVVVLESQDIRARVAQARDALEAAEARLALARSEKARVEALFKK--GVATRQRYDQALAELQAATAEVNRLKQSLREAETELSFTRIRAPVSGRVIDRLAEPGETATPGRPLLRIYDPDALRVEAPVRETLAVRLRLGQRLRIDIPALERTFEGTIEEIVPFAEPGARTLLVKVGLPPASGAVAGMFARIAVPAGKRTRLLMPVAALERVGQLEFVRVRDPAQGIERRLVTTGRYRDGDRIEVLSGLAEGEHVLVP 398          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A4R2KX59_9GAMM (RND family efflux transporter MFP subunit n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2KX59_9GAMM)

HSP 1 Score: 233 bits (595), Expect = 1.530e-71
Identity = 129/294 (43.88%), Postives = 187/294 (63.61%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALPE 882
            E    +VQA + T++S+R+ A +  + VR+GD V+ G  LV L+  +L A+  Q RE V +  ARL +A ++ +R   +       ++ +D+DAA++A R  +AE   A++ V+E+   LSY  + API G V+ERF +PGDT  PG P++ LYNP  LR+EA+VRE+LA  +  G  L V I ALD  L+  +EEIVP+ADPG+RAF+V+V LP  DSL PGM+ R+ IP+   ER  +P   VR +GQL+ +      G  RR+VR G  R D  +EV++GL PGDRV +P+
Sbjct:   59 EAVPASVQAVERTVVSSRLLARVSRLLVRSGDTVEAGALLVALEDDDLTAQTRQARESVNSIQARLDEASRNLQRASSMHER--GLIADTDLDAAISAARTLEAELQRARRRVEESEAALSYAQVRAPIGGRVVERFVEPGDTVSPGEPMVSLYNPVSLRVEAWVRESLALSLTEGDTLAVAIPALDRGLEGTIEEIVPAADPGARAFMVRVRLPPGDSLQPGMYARMQIPAGSVERLLIPQARVRSIGQLDVLWVQGESGPERRFVRLGPARDDNTVEVVAGLSPGDRVLVPQ 350          
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Match: A0A5C9A817_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A817_9GAMM)

HSP 1 Score: 233 bits (594), Expect = 1.820e-71
Identity = 137/294 (46.60%), Postives = 188/294 (63.95%), Query Frame = 1
Query:    1 ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDARVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALRAAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPLLKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPSADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQLEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALPE 882
            E  +G+V+AK  TIIS+R  A I  VHVRAGD VQ G  LV+L+  +L ARV Q  +   A AARL +A +   R   +       ++ +D+DAA A+  A QAE   A+Q   EA+  L+Y  I +PI+G +++RFA+PGDTA PG  LL LYNP  LR+EA VRE LA  +  G +L V + ALD+ +++ +EEIVP+A  GSR FLVK+ LP ++ L PGM+ R+LIP+    +  +P + V ++GQL  VL     G  RR+VR G+   DGR+E+LSGLEPG+ V  PE
Sbjct:   59 EPVSGSVEAKQATIISSRTLARIERVHVRAGDSVQRGDLLVELEQEDLAARVKQASQRSDAVAARLREAERSLSR--ALELQAKGLLAVADLDAAQASRDALQAELQSARQGEREASAALAYAEIRSPIDGRIVDRFAEPGDTATPGQKLLSLYNPLSLRVEAAVREQLALALQPGQQLAVELPALDSQVEATIEEIVPAAQTGSRTFLVKLHLPYDNKLLPGMYARVLIPAGSENKVLLPRDWVAQVGQLSVVLVAGPGGAQRRFVRVGSTLDDGRVEILSGLEPGEWVVAPE 350          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82233.19228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8CJP3_9BACT2.460e-9451.88HlyD_D23 domain-containing protein n=1 Tax=Nitrosp... [more]
A0A6J4WY14_9DELT3.250e-9051.36HlyD_D23 domain-containing protein n=1 Tax=Olavius... [more]
A0A0A0DJG1_9SPIO1.800e-8952.05HlyD_D23 domain-containing protein n=2 Tax=Bacteri... [more]
A0A7Y3DQB0_9DELT4.780e-8952.38Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7V7DXD0_9DELT1.480e-8250.00Efflux RND transporter periplasmic adaptor subunit... [more]
A0A3A4WZI4_9DELT4.470e-8147.93Efflux RND transporter periplasmic adaptor subunit... [more]
UPI0008D984D71.220e-7546.74efflux RND transporter periplasmic adaptor subunit... [more]
A0A3M0Y1I1_9PROT3.380e-7547.62Efflux RND transporter periplasmic adaptor subunit... [more]
A0A4R2KX59_9GAMM1.530e-7143.88RND family efflux transporter MFP subunit n=1 Tax=... [more]
A0A5C9A817_9GAMM1.820e-7146.60Efflux RND transporter periplasmic adaptor subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82233contigM-pyrifera_M_contig82233:2..886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score228.4
Seed ortholog evalue4.3e-57
Seed eggNOG ortholog472759.Nhal_0824
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EggNOG OGs1MXGH@1224,1SYRU@1236,1X2JA@135613,COG0845@1,COG0845@2
COG Functional cat.M
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
Exons1
Model size885
Cds size885
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816729.1650896-CDS-M-pyrifera_M_contig82233:1..8861622816729.1650896-CDS-M-pyrifera_M_contig82233:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82233 2..886 +
1692278144.358634-CDS-M-pyrifera_M_contig82233:1..8861692278144.358634-CDS-M-pyrifera_M_contig82233:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82233 2..886 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82233.19228.1prot_M-pyrifera_M_contig82233.19228.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82233 2..886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82233.19228.1

>prot_M-pyrifera_M_contig82233.19228.1 ID=prot_M-pyrifera_M_contig82233.19228.1|Name=mRNA_M-pyrifera_M_contig82233.19228.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
ERAAGTVQAKDETIISARITATIGNVHVRAGDRVQLGQRLVDLDARELDA
RVAQQREVVTAAAARLAKARQDNERIKGIFTTTPDAVSRSDVDAALAALR
AAQAEYAGAKQTVDEANTRLSYTAIDAPINGTVIERFADPGDTAVPGAPL
LKLYNPSLLRLEAYVRETLATRIVIGARLRVHIDALDTYLDSVVEEIVPS
ADPGSRAFLVKVTLPQNDSLYPGMFGRLLIPSTEAERYYVPANAVRRMGQ
LEFVLADSAQGLVRRYVRTGAHRTDGRLEVLSGLEPGDRVALPE*
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mRNA from alignment at M-pyrifera_M_contig82233:2..886+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82233.19228.1 ID=mRNA_M-pyrifera_M_contig82233.19228.1|Name=mRNA_M-pyrifera_M_contig82233.19228.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig82233:2..886+ (Macrocystis pyrifera P11B4 male)
GAACGCGCGGCCGGCACCGTGCAGGCGAAAGACGAAACGATCATTTCCGC GCGCATCACCGCGACAATCGGCAACGTGCACGTGCGCGCCGGTGATCGGG TGCAACTCGGTCAGCGTCTCGTCGATCTCGATGCACGCGAACTCGATGCG CGGGTCGCGCAGCAGCGCGAAGTGGTCACCGCGGCCGCGGCCCGGCTCGC GAAGGCGCGCCAGGATAACGAGCGGATCAAGGGCATATTCACGACGACCC CGGATGCCGTGTCGCGATCCGACGTCGATGCGGCGCTCGCCGCGTTGCGC GCGGCCCAGGCCGAGTACGCCGGTGCGAAACAGACCGTTGATGAGGCGAA CACGCGCTTGAGTTACACCGCCATCGATGCCCCGATCAACGGCACGGTGA TCGAACGCTTCGCCGATCCCGGTGACACGGCCGTCCCCGGCGCGCCGCTG TTGAAACTGTACAACCCGAGTCTGTTACGCCTGGAAGCCTACGTGCGCGA GACGCTCGCAACCCGTATCGTGATCGGCGCGCGCCTGCGCGTACACATCG ACGCGCTCGACACGTATCTCGATAGCGTGGTCGAAGAGATCGTGCCGTCG GCCGACCCGGGTTCGCGGGCGTTCCTGGTCAAGGTCACGCTACCGCAAAA CGACTCCTTGTATCCGGGCATGTTCGGTCGGCTGCTGATCCCGAGCACGG AAGCCGAGCGCTACTACGTGCCCGCGAACGCGGTGCGGCGCATGGGTCAG CTCGAGTTCGTGCTCGCCGACAGCGCACAGGGACTCGTGCGCCGCTACGT GCGCACCGGCGCGCACCGCACGGACGGCCGGCTCGAAGTGTTGAGCGGGC TCGAACCGGGCGATAGGGTGGCGCTGCCGGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82233:2..886+

>mRNA_M-pyrifera_M_contig82233.19228.1 ID=mRNA_M-pyrifera_M_contig82233.19228.1|Name=mRNA_M-pyrifera_M_contig82233.19228.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig82233:2..886+ (Macrocystis pyrifera P11B4 male)
GAACGCGCGGCCGGCACCGTGCAGGCGAAAGACGAAACGATCATTTCCGC
GCGCATCACCGCGACAATCGGCAACGTGCACGTGCGCGCCGGTGATCGGG
TGCAACTCGGTCAGCGTCTCGTCGATCTCGATGCACGCGAACTCGATGCG
CGGGTCGCGCAGCAGCGCGAAGTGGTCACCGCGGCCGCGGCCCGGCTCGC
GAAGGCGCGCCAGGATAACGAGCGGATCAAGGGCATATTCACGACGACCC
CGGATGCCGTGTCGCGATCCGACGTCGATGCGGCGCTCGCCGCGTTGCGC
GCGGCCCAGGCCGAGTACGCCGGTGCGAAACAGACCGTTGATGAGGCGAA
CACGCGCTTGAGTTACACCGCCATCGATGCCCCGATCAACGGCACGGTGA
TCGAACGCTTCGCCGATCCCGGTGACACGGCCGTCCCCGGCGCGCCGCTG
TTGAAACTGTACAACCCGAGTCTGTTACGCCTGGAAGCCTACGTGCGCGA
GACGCTCGCAACCCGTATCGTGATCGGCGCGCGCCTGCGCGTACACATCG
ACGCGCTCGACACGTATCTCGATAGCGTGGTCGAAGAGATCGTGCCGTCG
GCCGACCCGGGTTCGCGGGCGTTCCTGGTCAAGGTCACGCTACCGCAAAA
CGACTCCTTGTATCCGGGCATGTTCGGTCGGCTGCTGATCCCGAGCACGG
AAGCCGAGCGCTACTACGTGCCCGCGAACGCGGTGCGGCGCATGGGTCAG
CTCGAGTTCGTGCTCGCCGACAGCGCACAGGGACTCGTGCGCCGCTACGT
GCGCACCGGCGCGCACCGCACGGACGGCCGGCTCGAAGTGTTGAGCGGGC
TCGAACCGGGCGATAGGGTGGCGCTGCCGGAGTGAGAACGCGCGGCCGGC
ACCGTGCAGGCGAAAGACGAAACGATCATTTCCGCGCGCATCACCGCGAC
AATCGGCAACGTGCACGTGCGCGCCGGTGATCGGGTGCAACTCGGTCAGC
GTCTCGTCGATCTCGATGCACGCGAACTCGATGCGCGGGTCGCGCAGCAG
CGCGAAGTGGTCACCGCGGCCGCGGCCCGGCTCGCGAAGGCGCGCCAGGA
TAACGAGCGGATCAAGGGCATATTCACGACGACCCCGGATGCCGTGTCGC
GATCCGACGTCGATGCGGCGCTCGCCGCGTTGCGCGCGGCCCAGGCCGAG
TACGCCGGTGCGAAACAGACCGTTGATGAGGCGAACACGCGCTTGAGTTA
CACCGCCATCGATGCCCCGATCAACGGCACGGTGATCGAACGCTTCGCCG
ATCCCGGTGACACGGCCGTCCCCGGCGCGCCGCTGTTGAAACTGTACAAC
CCGAGTCTGTTACGCCTGGAAGCCTACGTGCGCGAGACGCTCGCAACCCG
TATCGTGATCGGCGCGCGCCTGCGCGTACACATCGACGCGCTCGACACGT
ATCTCGATAGCGTGGTCGAAGAGATCGTGCCGTCGGCCGACCCGGGTTCG
CGGGCGTTCCTGGTCAAGGTCACGCTACCGCAAAACGACTCCTTGTATCC
GGGCATGTTCGGTCGGCTGCTGATCCCGAGCACGGAAGCCGAGCGCTACT
ACGTGCCCGCGAACGCGGTGCGGCGCATGGGTCAGCTCGAGTTCGTGCTC
GCCGACAGCGCACAGGGACTCGTGCGCCGCTACGTGCGCACCGGCGCGCA
CCGCACGGACGGCCGGCTCGAAGTGTTGAGCGGGCTCGAACCGGGCGATA
GGGTGGCGCTGCCGGAGTGA
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