mRNA_M-pyrifera_M_contig82087.19199.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A2E0YWD5_9GAMM (SAM-dependent methyltransferase n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YWD5_9GAMM) HSP 1 Score: 263 bits (673), Expect = 3.270e-86 Identity = 121/205 (59.02%), Postives = 158/205 (77.07%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRRNKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTAVVH 615 AG+GSYEP +PT+A+EP+ +MI+QRR+ RN VQA+AE++P +D AVD +A+LTVHHWS+LAQGL+ECAR ++R+V + TWDP+ PGFW T++YFPE+L DR +R+ LG ++V PV IPADC DGFLGAYWRRP AYL EVR+G+SSFS I +LP RL+QL DLA G W R + +++ DLGYRLVTAVV+ Sbjct: 44 AGTGSYEPDDIPTIAIEPSARMIRQRRDTRNAVQANAEAIPLRDDAVDCTMAILTVHHWSSLAQGLAECARIARRKVIIFTWDPEAPGFWLTRDYFPEILALDRXXXXXXQAIRRCLGPVQVRPVPIPADCRDGFLGAYWRRPRAYLDREVRAGISSFSLIDDLPARLEQLESDLADGTWRRVQGEMLPRDNLDLGYRLVTAVVN 248
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A3D4YN04_9BACT (SAM-dependent methyltransferase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3D4YN04_9BACT) HSP 1 Score: 231 bits (588), Expect = 3.260e-73 Identity = 109/206 (52.91%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTAVVH 615 AG+GSYEP+ VAVEP+ M+ QRR + V+A AE+LPF+D A D VLA+LTVHHW++ +GL ECAR ++ V +LTWDPD GFW ++YFPE+L DR IFP M+ L G I+V P+ IP DCVDGFLGAYW RP+AYL +E+RSG+S+F R+ + +L++L +DL SG W R + L+ + D+GYRLV A H Sbjct: 40 AGTGSYEPVRSGVVAVEPSAVMLSQRRPSAAPAVRAVAEALPFQDQAFDVVLAILTVHHWNDQRRGLEECARVARDRVVILTWDPDAEGFWLVRDYFPEILAIDRRIFPPMELLSAVFGPIDVQPLPIPGDCVDGFLGAYWLRPEAYLDEEIRSGISTFGRLTSTDPQLERLERDLTSGNWERRNAELRHRADLDVGYRLVIAERH 245
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A1Q7PEE9_9BACT (Methyltransf_11 domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8 TaxID=1805354 RepID=A0A1Q7PEE9_9BACT) HSP 1 Score: 230 bits (586), Expect = 4.920e-73 Identity = 112/203 (55.17%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP VAVEPA MI+QRR VVQASA LPF+D A + LA+LTVHHW + A+GL E AR ++R V ++TWDP T GFW T +YFPE+ E DR +FPS++ R G +EV P IP DCVDGFLGAYWRRP AYL VR +S+F+++ + RLD+LR+DLA G W R H L + DLGYR+V A Sbjct: 41 AGAGSYEPSDRAVVAVEPAMTMIRQRRPGGAPVVQASATELPFRDDAFAAALAILTVHHWPDQARGLDEMARVARRRVVVVTWDPSTSGFWLTDDYFPEIFEIDRPLFPSIEAFRLAWGHVEVHPFSIPHDCVDGFLGAYWRRPHAYLDAGVRGAISTFAKLREVEPRLDRLRRDLADGTWTRRHGHLLSRSEIDLGYRIVIA 243
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A1Q7FT35_9BACT (Methyltransf_11 domain-containing protein n=3 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7FT35_9BACT) HSP 1 Score: 229 bits (584), Expect = 6.100e-73 Identity = 114/203 (56.16%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP P VAVEPA MI+QRR VVQA + LPF DAA + LAVLTVHHWS QGL+E AR ++R V ++TWDP T GFW ++YFP ++ DR IFPS++E R LG +EV P+ +P DC DGFLGAYWRRP AYL VRS +S+FS+I + L +LR+DL G W R + L Q DLGYRLVTA Sbjct: 20 AGAGSYEPTDRPVVAVEPALSMIRQRRAGSAPVVQAVSTHLPFPDAAFSAALAVLTVHHWSERTQGLAELARVARRRVVVVTWDPATSGFWLVEDYFPAIVAIDRRIFPSIEEFRCVLGEVEVRPLLVPHDCADGFLGAYWRRPYAYLDPGVRSAISTFSKIDEVDPGLARLRRDLEDGTWTRRYGHLLSQSELDLGYRLVTA 222
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A2V7C4K4_9BACT (SAM-dependent methyltransferase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7C4K4_9BACT) HSP 1 Score: 227 bits (579), Expect = 5.660e-72 Identity = 109/203 (53.69%), Postives = 140/203 (68.97%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP VAVEPA MI QRR VVQASA LPF+D + LA+LTVHHW + A+GL E AR ++R + ++TWDP T GFW +YFPE++E DR IFPS++ ++ G +EV P+ IP DCVDGFLGAYWRRP AYL VR +S+F+++ +L LD+LR+DLA G W R H L ++ DLGYR+V A Sbjct: 41 AGAGSYEPADRSVVAVEPAMTMIHQRRPGSAPVVQASATELPFRDDGFAAALAILTVHHWPDQARGLDELARVARRRIVVVTWDPSTSGFWLVDDYFPEIVELDRPIFPSIEAFKRAFGRVEVHPLPIPHDCVDGFLGAYWRRPHAYLDVGVRGAISTFAKLRDLEPGLDRLRRDLADGTWVRRHGDLLDRSEMDLGYRIVIA 243
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A2V6UXJ4_9BACT (SAM-dependent methyltransferase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6UXJ4_9BACT) HSP 1 Score: 226 bits (575), Expect = 3.040e-71 Identity = 113/204 (55.39%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPG-FWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP P VAVEP+ M++QRR VQASA LPF+DAA + LAVLTVHHW + A+GL E AR ++ V +LTWDP FW +YFPEL+ DR IFP+++ELR+ LG IEV PV +P DCVDGFLGAYWRRP AYL VR +S+F+++A+ L +LR DLA G W R H L+ +++ DLGYRLV A Sbjct: 47 AGAGSYEPADRPVVAVEPSPAMLRQRRPGAAPAVQASATDLPFRDAAFGAALAVLTVHHWPDRARGLGELARVTRERVVILTWDPAAVSRFWLIDDYFPELMTLDRDIFPTLEELRRALGRIEVRPVLVPHDCVDGFLGAYWRRPQAYLDAGVRGAISTFTKLADAEPGLARLRADLADGTWERRHGHLRARDAIDLGYRLVVA 250
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A2V7DHC3_9BACT (SAM-dependent methyltransferase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7DHC3_9BACT) HSP 1 Score: 224 bits (571), Expect = 9.850e-71 Identity = 107/205 (52.20%), Postives = 141/205 (68.78%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIA--NLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP+ P VAVEPA MI+QRR VQASA LPF+D LA+LTVHHW + A+GL E AR ++R V ++TWDP + GFW +YFPE+++ DR IFP++++ R+ G +EV P++IP DC+DGFLGAYWRRP AYL VRS +S+F++ L L++LR+DLA G W R H L+ DLGYR+V A Sbjct: 41 AGTGSYEPVDRPVVAVEPAMTMIRQRRAGSAPAVQASATELPFRDDGFAGALAILTVHHWPDRARGLDELARVARRRVVVVTWDPSSSGFWLVDDYFPEIMDIDRRIFPTIEDFRRAFGRVEVQPLQIPHDCLDGFLGAYWRRPHAYLDAGVRSAISTFAKAQPRELQSGLERLRRDLADGTWERRHAGLRALTEIDLGYRIVIA 245
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A2L0EYM1_SORCE (MerR family transcriptional regulator n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0EYM1_SORCE) HSP 1 Score: 224 bits (570), Expect = 1.800e-70 Identity = 112/203 (55.17%), Postives = 140/203 (68.97%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRRNKR-NVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG GSYEP VAVEP+ MI QRR VVQASAE LPF DAA D+ +A+LTVHHW++ +GL E R + R + +LTWD + GFW TQ+YFPEL+ DR +FP++++LR LG V PV IP+DC DGFLGAYW RP AYL VR +SSFSR+ ++ L +L DL SG WHR H +L E++S DLGYRLV + Sbjct: 39 AGVGSYEPTDRRVVAVEPSATMIAQRRTPDVEVVQASAEGLPFPDAAFDAAMAILTVHHWADWRKGLDEMRRVASR-IVVLTWDSSSDGFWLTQDYFPELIALDRALFPAIEDLRGALGRARVEPVPIPSDCTDGFLGAYWSRPHAYLDAGVRGAISSFSRLNDVDSGLRRLAADLESGRWHRRHGQLTERDSLDLGYRLVVS 240
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A3N5ICP8_9BACT (Methyltransferase domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5ICP8_9BACT) HSP 1 Score: 223 bits (568), Expect = 3.850e-70 Identity = 110/203 (54.19%), Postives = 140/203 (68.97%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRR-NKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP PT+AVEP+ M+ QRR VVQASA LPF+DAA + LAVLTVHHW + A GL+E AR S+ V +LTWDP + GFW EYFPE+ DR IFP++ EL++ LG EV P+ +P DC DGFLGAYWRRP+AYL VR +S+F+++ +L + +LR+DL G W R H L ++ DLGYRLV A Sbjct: 41 AGAGSYEPTDRPTIAVEPSATMVGQRRPGSPPVVQASATHLPFRDAAFAAALAVLTVHHWPDRAGGLAELARVSRDRVVLLTWDPGSTGFWLVDEYFPEIGAIDRPIFPTLGELQRLLGITEVRPLPVPHDCTDGFLGAYWRRPEAYLDPGVRGAISTFTKVRDLEPGVARLRRDLDDGTWLRRHADLLDRTELDLGYRLVVA 243
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Match: A0A3E0PFJ4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3E0PFJ4_9BACT) HSP 1 Score: 222 bits (566), Expect = 4.970e-70 Identity = 103/202 (50.99%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 1 AGSGSYEPIHVPTVAVEPAFQMIQQRRNKRNVVQASAESLPFKDAAVDSVLAVLTVHHWSNLAQGLSECARTSKREVAMLTWDPDTPGFWFTQEYFPELLEFDRGIFPSMDELRQHLGSIEVAPVEIPADCVDGFLGAYWRRPDAYLSDEVRSGMSSFSRIANLPDRLDQLRKDLASGVWHRAHRRLQEQESCDLGYRLVTA 606 AG+GSYEP V VAVEP+ +MI QR + NVV+A AE+LPF D A D+V+AVLT+HHW + GL EC R +++ + ++TWDP + GFW T++YFPE++E D IF SM+ L + LG I++ + IPADC DGFL +YW+RP+ YL EVR+G+S+FS I+++ R+D LR+++ S W R++R + S D GYR+VTA Sbjct: 40 AGTGSYEPNDVEVVAVEPSREMIGQRTDNSNVVRAYAEALPFDDDAFDAVMAVLTIHHWKDQRLGLQECQRVARKRIVLVTWDPASDGFWLTRDYFPEIIERDIEIFCSMELLGEVLGEIDITKLRIPADCRDGFLASYWKRPERYLDSEVRAGISAFSLISDVDSRIDSLRENIESEEWERSNRDITALVSIDAGYRIVTA 241 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82087.19199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82087.19199.1 >prot_M-pyrifera_M_contig82087.19199.1 ID=prot_M-pyrifera_M_contig82087.19199.1|Name=mRNA_M-pyrifera_M_contig82087.19199.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp AGSGSYEPIHVPTVAVEPAFQMIQQRRNKRNVVQASAESLPFKDAAVDSVback to top mRNA from alignment at M-pyrifera_M_contig82087:3..620+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82087.19199.1 ID=mRNA_M-pyrifera_M_contig82087.19199.1|Name=mRNA_M-pyrifera_M_contig82087.19199.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig82087:3..620+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82087:3..620+ >mRNA_M-pyrifera_M_contig82087.19199.1 ID=mRNA_M-pyrifera_M_contig82087.19199.1|Name=mRNA_M-pyrifera_M_contig82087.19199.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig82087:3..620+ (Macrocystis pyrifera P11B4 male)back to top |