prot_M-pyrifera_M_contig8204.19192.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8204.19192.1
Unique Nameprot_M-pyrifera_M_contig8204.19192.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig8204.19192.1 vs. uniprot
Match: D7G3W7_ECTSI (Vps54_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.970e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 
Query:    9 KDVARLAVTRQIASMVQENYAALVGGMRQVQAVDLDLARAGVQV 52
            KDVARLAVT QIASMVQENYAALVGGMRQVQAVDLDLARAGVQ+
Sbjct:   51 KDVARLAVTTQIASMVQENYAALVGGMRQVQAVDLDLARAGVQI 94
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8204.19192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3W7_ECTSI2.970e-1695.45Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8204contigM-pyrifera_M_contig8204:161..328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8204.19192.1mRNA_M-pyrifera_M_contig8204.19192.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8204 161..328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8204.19192.1 ID=prot_M-pyrifera_M_contig8204.19192.1|Name=mRNA_M-pyrifera_M_contig8204.19192.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
MLTSSFVHKDVARLAVTRQIASMVQENYAALVGGMRQVQAVDLDLARAGV
QVRRER
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