mRNA_M-pyrifera_M_contig82035.19189.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A6C0TZG6_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0TZG6_9GAMM) HSP 1 Score: 113 bits (283), Expect = 2.000e-27 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 K+GYT H DDVG+IHMNGR+Y PSLGR+LSPDPVTQAPENAQNYNRYSY FN PL Y DP G Sbjct: 40 KRGYTGHEHLDDVGMIHMNGRVYSPSLGRMLSPDPVTQAPENAQNYNRYSYAFNNPLTYTDPSG 103
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A2E7C220_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C220_9GAMM) HSP 1 Score: 117 bits (292), Expect = 2.650e-27 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 ++GYT H DDVGIIHMNGRLY PSLGR+LSPDPVTQAPENAQNYNRYSY FN PLKY DP G Sbjct: 447 RRGYTGHEHLDDVGIIHMNGRLYSPSLGRMLSPDPVTQAPENAQNYNRYSYAFNNPLKYTDPTG 510
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A6C0TY55_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0TY55_9GAMM) HSP 1 Score: 113 bits (283), Expect = 6.810e-27 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 K+GYT H DDVGIIHMNGR+Y PSLGR+LSPDPVTQAPENAQNYNRYSY +N PL Y DP G Sbjct: 226 KRGYTGHEHLDDVGIIHMNGRVYSPSLGRMLSPDPVTQAPENAQNYNRYSYAYNNPLTYTDPSG 289
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: UPI0004084DF6 (RHS repeat-associated core domain-containing protein n=1 Tax=Haliea salexigens TaxID=287487 RepID=UPI0004084DF6) HSP 1 Score: 115 bits (288), Expect = 7.020e-27 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 K+GYT H DDVGIIHMNGRLY PSLGR+LSPDPVTQAPENAQNYNRYSY FN PL++ DP G Sbjct: 274 KRGYTGHEHLDDVGIIHMNGRLYSPSLGRMLSPDPVTQAPENAQNYNRYSYAFNNPLRFTDPSG 337
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A6C0U5P3_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U5P3_9GAMM) HSP 1 Score: 112 bits (280), Expect = 1.410e-26 Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 K+GYT H DDVG+IHMNGR+Y PSLGR+LSPDPVTQAPENAQNYNRYSY +N PL Y DP G Sbjct: 262 KRGYTGHEHLDDVGMIHMNGRVYSPSLGRMLSPDPVTQAPENAQNYNRYSYAYNNPLTYTDPSG 325
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A3C7W3S5_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C7W3S5_9GAMM) HSP 1 Score: 110 bits (276), Expect = 5.190e-26 Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 ++GYT H DD+G+IHMNGR+Y PSLGR+LSPDPVTQAP++AQNYNRY+Y+FN PLKY DP G Sbjct: 72 QRGYTGHEHLDDIGVIHMNGRVYSPSLGRMLSPDPVTQAPDDAQNYNRYTYSFNNPLKYTDPSG 135
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A3L7DUT4_9GAMM (TcdB_toxin_midN domain-containing protein n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7DUT4_9GAMM) HSP 1 Score: 105 bits (261), Expect = 4.320e-23 Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 4 QGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRGSSRRRVSLQVTSPTTSS 243 +GYT H DDVGIIHMNGR+Y PSLGR+L+PDPV PEN +NYNRY+Y FN PLKY DP G + + + SS Sbjct: 1668 RGYTGHEHLDDVGIIHMNGRIYSPSLGRMLNPDPVVGEPENGRNYNRYTYVFNNPLKYTDPSGFDKSKSKIVCADSCVSS 1747
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: UPI001679AD1F (hypothetical protein n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001679AD1F) HSP 1 Score: 103 bits (258), Expect = 1.100e-22 Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 4 QGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRG 192 +GYT H DDVGIIHMNGR+Y P+L R+LSPDPVTQA EN QNYNRY+Y +N PLKY DP G Sbjct: 1740 RGYTGHEHLDDVGIIHMNGRVYSPTLARMLSPDPVTQALENGQNYNRYTYVYNNPLKYTDPSG 1802
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A5E6P1H5_9GAMM (Uncharacterized protein n=1 Tax=uncultured Gammaproteobacteria bacterium TaxID=86473 RepID=A0A5E6P1H5_9GAMM) HSP 1 Score: 91.7 bits (226), Expect = 6.600e-21 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 4 QGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRGS 195 +G+T H D++G+IHMNGR+Y P +GR LS DP Q+P N Q+YNRYSYT N PLKY DP G+ Sbjct: 23 RGFTGHEHIDEMGLIHMNGRVYDPQIGRFLSADPYIQSPYNTQSYNRYSYTINNPLKYTDPTGN 86
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Match: A0A2S1JS72_9GAMM (Uncharacterized protein n=1 Tax=Microbulbifer sp. A4B17 TaxID=359370 RepID=A0A2S1JS72_9GAMM) HSP 1 Score: 98.6 bits (244), Expect = 7.370e-21 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 KQGYTDDNHRDDVGIIHMNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRGSSRRRVSLQVTSP 231 K+GYT H D G+IHMNGR+Y P+LGR LSPDP+ QAP +QN+NRYSY FN PL + DP G S + T P Sbjct: 319 KRGYTGHEHLDRTGLIHMNGRIYDPTLGRFLSPDPIVQAPTYSQNWNRYSYVFNNPLSFTDPSGFSAKDKKEDTTKP 395 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82035.19189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82035.19189.1 >prot_M-pyrifera_M_contig82035.19189.1 ID=prot_M-pyrifera_M_contig82035.19189.1|Name=mRNA_M-pyrifera_M_contig82035.19189.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp MNGRLYIPSLGRVLSPDPVTQAPENAQNYNRYSYTFNYPLKYIDPRGSSRback to top mRNA from alignment at M-pyrifera_M_contig82035:411..913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82035.19189.1 ID=mRNA_M-pyrifera_M_contig82035.19189.1|Name=mRNA_M-pyrifera_M_contig82035.19189.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=503bp|location=Sequence derived from alignment at M-pyrifera_M_contig82035:411..913- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82035:411..913- >mRNA_M-pyrifera_M_contig82035.19189.1 ID=mRNA_M-pyrifera_M_contig82035.19189.1|Name=mRNA_M-pyrifera_M_contig82035.19189.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig82035:411..913- (Macrocystis pyrifera P11B4 male)back to top |