prot_M-pyrifera_M_contig8200.19188.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8200.19188.1
Unique Nameprot_M-pyrifera_M_contig8200.19188.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 9.040e-72
Identity = 119/124 (95.97%), Postives = 119/124 (95.97%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.100e-70
Identity = 118/123 (95.93%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.110e-66
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.080e-65
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.810e-65
Identity = 105/121 (86.78%), Postives = 116/121 (95.87%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG +AKKST++S+KAGLQFPV R+GRFLK G+YA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 8.470e-65
Identity = 105/120 (87.50%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK T+RSAKAGLQFPVGR+GRF+K GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.550e-63
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRG-GKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.200e-63
Identity = 103/120 (85.83%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG+ KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.780e-63
Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    3 GKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            GKGKGGRGD KK+ ++SAKAGLQFPVGRVGRFLK G+YA+RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Match: A0A7S0DT92_9EUKA (Histone H2A n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT92_9EUKA)

HSP 1 Score: 197 bits (502), Expect = 6.420e-63
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAK--KSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  K  KSTTRSA+AGLQFPVGR+ RFL+ G++A RVG GAPVYLAAVLEYLTAE+LELAGNAARDNK++RIIPRH+QLA+RNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKGKAVKSTTRSARAGLQFPVGRISRFLRKGRFAARVGGGAPVYLAAVLEYLTAEILELAGNAARDNKRSRIIPRHVQLAIRNDEELNKLLGGVTIASGGVLPNIHAVLLPKK 122
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8200.19188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI9.040e-7295.97Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.100e-7095.93Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE2.110e-6691.67Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI1.080e-6591.67Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A836CG77_9STRA5.810e-6586.78Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D8LLP0_ECTSI8.470e-6587.50Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6U2JFS4_9STRA1.550e-6385.37Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A448ZH28_9STRA2.200e-6385.83Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A835ZLE9_9STRA2.780e-6385.25Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S0DT92_9EUKA6.420e-6384.43Histone H2A n=1 Tax=Amorphochlora amoebiformis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 58..71
score: 90.54
coord: 72..86
score: 77.52
coord: 14..36
score: 68.99
coord: 43..58
score: 90.36
coord: 100..118
score: 76.04
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 9.0E-80
score: 281.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..124
e-value: 1.7E-18
score: 66.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..124
e-value: 1.2E-62
score: 211.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..123
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..89
e-value: 1.8E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8200contigM-pyrifera_M_contig8200:11106..11480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8200.19188.1mRNA_M-pyrifera_M_contig8200.19188.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8200 11106..11480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8200.19188.1 ID=prot_M-pyrifera_M_contig8200.19188.1|Name=mRNA_M-pyrifera_M_contig8200.19188.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS