mRNA_M-pyrifera_M_contig81945.19175.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81945.19175.1
Unique NamemRNA_M-pyrifera_M_contig81945.19175.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: D7FK80_ECTSI (Fructose-bisphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK80_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.360e-19
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK+ES PWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKG++
Sbjct:  140 FKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKL 182
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: B8BXS2_THAPS (Fructose-bisphosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXS2_THAPS)

HSP 1 Score: 70.9 bits (172), Expect = 3.040e-13
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FKS   P++ RYVGSMV+D+HRTLLYGG+++YPADKKS KG++
Sbjct:  225 FKSSEKPYSARYVGSMVADIHRTLLYGGIYIYPADKKSPKGKL 267
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A7S4MR23_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4MR23_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.290e-13
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK    P+A RYVGSMV+D+HRTLLYGG+++YPAD KS KG++
Sbjct:   10 FKKGPKPYAARYVGSMVADIHRTLLYGGIYMYPADNKSPKGKL 52
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A2P2LM93_RHIMU (Fructose-bisphosphatase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LM93_RHIMU)

HSP 1 Score: 68.2 bits (165), Expect = 4.430e-13
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 1 
Query:    4 KSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            K  S+P + RY+GSMV+DVHRTLLYGG+FLYPADKKS KG++
Sbjct:   95 KDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSLKGKL 136
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A7R9YJ70_DIALT (Fructose-bisphosphatase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YJ70_DIALT)

HSP 1 Score: 70.5 bits (171), Expect = 4.810e-13
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FKS   P+A RYVGSMVSDVHRTLLYGG+F+YPADKKS  G++
Sbjct:  250 FKSGDKPYALRYVGSMVSDVHRTLLYGGVFIYPADKKSPGGKL 292
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: F0YHW0_AURAN (Fructose-bisphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHW0_AURAN)

HSP 1 Score: 70.1 bits (170), Expect = 5.620e-13
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK+   P++ RYVGSMVSDVHRTLLYGG+F YPADKKS KG++
Sbjct:  228 FKAGPKPYSARYVGSMVSDVHRTLLYGGVFYYPADKKSAKGKL 270
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A7S0BWS4_9STRA (Fructose-bisphosphatase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWS4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.990e-13
Identity = 28/43 (65.12%), Postives = 38/43 (88.37%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK    P++ RYVGSMV+D+HRTLLYGG+++YPADKK+TKG++
Sbjct:  228 FKHSEKPYSARYVGSMVADIHRTLLYGGIYIYPADKKNTKGKL 270
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: W7TP29_9STRA (Fructose-bisphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP29_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.220e-13
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK +  P+A RYVGSMVSDVHRTLLYGG+FLYPAD+KS  G++
Sbjct:  234 FKHQDPPYAARYVGSMVSDVHRTLLYGGIFLYPADRKSKIGKL 276
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A813K0Q0_POLGL (Fructose-bisphosphatase (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K0Q0_POLGL)

HSP 1 Score: 69.7 bits (169), Expect = 7.160e-13
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1 
Query:   22 WAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            +A RYVGSMVSDVHRTLLYGG+FLYPADKKSTKG++
Sbjct:  214 YAARYVGSMVSDVHRTLLYGGIFLYPADKKSTKGKL 249
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BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Match: A0A1E7F570_9STRA (Fructose-bisphosphatase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F570_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.090e-13
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:    1 FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEM 129
            FK E  P+A RYVGSMV+D+HRT+LYGG++LYPAD KS KG++
Sbjct:  228 FKDEKNPYAARYVGSMVADIHRTILYGGIYLYPADAKSPKGKL 270
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81945.19175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK80_ECTSI1.360e-1990.70Fructose-bisphosphatase n=1 Tax=Ectocarpus silicul... [more]
B8BXS2_THAPS3.040e-1367.44Fructose-bisphosphatase n=1 Tax=Thalassiosira pseu... [more]
A0A7S4MR23_9STRA3.290e-1365.12Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A2P2LM93_RHIMU4.430e-1371.43Fructose-bisphosphatase n=1 Tax=Rhizophora mucrona... [more]
A0A7R9YJ70_DIALT4.810e-1374.42Fructose-bisphosphatase n=2 Tax=Diacronema lutheri... [more]
F0YHW0_AURAN5.620e-1372.09Fructose-bisphosphatase n=1 Tax=Aureococcus anopha... [more]
A0A7S0BWS4_9STRA5.990e-1365.12Fructose-bisphosphatase n=2 Tax=Proboscia inermis ... [more]
W7TP29_9STRA6.220e-1372.09Fructose-bisphosphatase n=2 Tax=Monodopsidaceae Ta... [more]
A0A813K0Q0_POLGL7.160e-1386.11Fructose-bisphosphatase (Fragment) n=1 Tax=Polarel... [more]
A0A1E7F570_9STRA8.090e-1367.44Fructose-bisphosphatase n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81945contigM-pyrifera_M_contig81945:783..920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.8
Seed ortholog evalue1.4e-15
Seed eggNOG ortholog2880.D7FK80
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
Ec32 ortholog descriptioncytosolic fructose-1,6-bisphosphatase
Ec32 orthologEc-17_003090.1
EC3.1.3.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size138
Cds size138
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816726.8580801-CDS-M-pyrifera_M_contig81945:782..9201622816726.8580801-CDS-M-pyrifera_M_contig81945:782..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81945 783..920 -
1692278143.2189171-CDS-M-pyrifera_M_contig81945:782..9201692278143.2189171-CDS-M-pyrifera_M_contig81945:782..920Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81945 783..920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81945.19175.1prot_M-pyrifera_M_contig81945.19175.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81945 783..920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81945.19175.1

>prot_M-pyrifera_M_contig81945.19175.1 ID=prot_M-pyrifera_M_contig81945.19175.1|Name=mRNA_M-pyrifera_M_contig81945.19175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
FKSESAPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGEMHW*
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mRNA from alignment at M-pyrifera_M_contig81945:783..920-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81945.19175.1 ID=mRNA_M-pyrifera_M_contig81945.19175.1|Name=mRNA_M-pyrifera_M_contig81945.19175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=138bp|location=Sequence derived from alignment at M-pyrifera_M_contig81945:783..920- (Macrocystis pyrifera P11B4 male)
TTCAAGTCGGAATCTGCCCCCTGGGCCCAGCGCTACGTTGGCTCCATGGT
TTCGGACGTTCACCGTACGCTGCTGTACGGTGGGCTGTTCCTCTACCCTG
CCGACAAGAAATCCACCAAGGGTGAGATGCACTGGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81945:783..920-

>mRNA_M-pyrifera_M_contig81945.19175.1 ID=mRNA_M-pyrifera_M_contig81945.19175.1|Name=mRNA_M-pyrifera_M_contig81945.19175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig81945:783..920- (Macrocystis pyrifera P11B4 male)
TTCAAGTCGGAATCTGCCCCCTGGGCCCAGCGCTACGTTGGCTCCATGGT
TTCGGACGTTCACCGTACGCTGCTGTACGGTGGGCTGTTCCTCTACCCTG
CCGACAAGAAATCCACCAAGGGTGAGATGCACTGGTAATTCAAGTCGGAA
TCTGCCCCCTGGGCCCAGCGCTACGTTGGCTCCATGGTTTCGGACGTTCA
CCGTACGCTGCTGTACGGTGGGCTGTTCCTCTACCCTGCCGACAAGAAAT
CCACCAAGGGTGAGATGCACTGGTAA
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