mRNA_M-pyrifera_M_contig8194.19174.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A836CIL5_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL5_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.800e-54 Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAGVA 327 ++VEETLERIKVQPGVEGYVICDM+GQVLRRFPTMSQETAE+YA +M HLA KARGVVRD+NPK E+ Y+RIRAKRHEV+VAFD++FLAIVIQRWQPAG + Sbjct: 2 AQVEETLERIKVQPGVEGYVICDMQGQVLRRFPTMSQETAEMYAASMMHLAHKARGVVRDLNPKSELNYLRIRAKRHEVMVAFDKEFLAIVIQRWQPAGTS 102
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: D7FWL6_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL6_ECTSI) HSP 1 Score: 163 bits (412), Expect = 2.110e-50 Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRD 282 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGE+KYMRIRAKRHEVLVAF + Sbjct: 2 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGELKYMRIRAKRHEVLVAFGEE 87
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A6T7GUX9_9STRA (Dynein light chain roadblock n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GUX9_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.310e-47 Identity = 74/99 (74.75%), Postives = 88/99 (88.89%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAG 321 SEVEETLER+KVQ GVEGYVIC+ +G VLRRFP MSQE AE YA++MRHLA KARGVVRD+NP+ E++Y+RIRAKRHEV++AFD +FL IVIQ+W PAG Sbjct: 2 SEVEETLERVKVQNGVEGYVICNRQGLVLRRFPQMSQEHAEQYADSMRHLANKARGVVRDLNPQNELRYLRIRAKRHEVMIAFDNEFLVIVIQKWTPAG 100
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A6U1LT09_9STRA (Dynein light chain roadblock n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LT09_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.070e-46 Identity = 72/99 (72.73%), Postives = 89/99 (89.90%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAG 321 SEVEETLER+KVQPGVEGYVIC+ +GQVLRRFP+M Q+ AE+YA++MR LA KARGVVRD+NP+ E++Y+RIRA+R EV+VA+D +FL IVIQRWQPA Sbjct: 2 SEVEETLERVKVQPGVEGYVICNKQGQVLRRFPSMRQDLAELYADSMRCLAAKARGVVRDLNPQHELRYLRIRARREEVMVAYDNEFLVIVIQRWQPAA 100
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: F0Y2Y8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Y8_AURAN) HSP 1 Score: 149 bits (376), Expect = 9.950e-45 Identity = 71/99 (71.72%), Postives = 85/99 (85.86%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAG 321 SEVEETLER+K+Q GVEGYVIC +GQVLRR P+M+Q AEIYA+ M L+ KARGVVRD+NPK E++Y+R+RAKRHEVLVAFD++FL IVIQRW PA Sbjct: 2 SEVEETLERVKIQAGVEGYVICSKQGQVLRRLPSMTQAQAEIYADFMSQLSRKARGVVRDLNPKNELRYLRLRAKRHEVLVAFDQEFLVIVIQRWTPAS 100
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A7S3H6W3_9STRA (Dynein light chain roadblock n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6W3_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.430e-41 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAG 321 SEVEET+ERIKVQ GVEGYVIC+ +GQVLRRFPTMS E AE YA M L +ARGVVRD++PK E+ Y+R+RAKRHE++VA+D F+ IVIQRW PA Sbjct: 2 SEVEETIERIKVQSGVEGYVICNKQGQVLRRFPTMSLEDAERYATTMISLTTQARGVVRDLDPKNELSYLRVRAKRHEIMVAYDVQFIVIVIQRWTPAA 100
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A812SWU6_SYMMI (DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SWU6_SYMMI) HSP 1 Score: 131 bits (330), Expect = 5.940e-38 Identity = 63/83 (75.90%), Postives = 76/83 (91.57%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAF 273 SEVEET+ERIKVQPGVEGYVIC+ +GQVLRRFPTM+QETAE Y+EAM L+ +AR VVRD+NPK E+KY+R+RAKRHE++VAF Sbjct: 1 SEVEETIERIKVQPGVEGYVICNKQGQVLRRFPTMTQETAEQYSEAMMSLSSQARSVVRDLNPKNELKYLRVRAKRHEIMVAF 83
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A7S0SZ17_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ17_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.740e-36 Identity = 60/102 (58.82%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 13 SFKQSEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPA 318 S K SEVE T+ERIK GVEGYVIC+ GQVLRRFPTMS + A+ YA M L +ARGV+RD++PK ++KY+R+R+K+HE++VAFD F+ I++QRW A Sbjct: 4 SIKMSEVEATIERIKRLNGVEGYVICNQVGQVLRRFPTMSPDVADEYATKMLSLTTQARGVIRDLSPKNDLKYLRVRSKKHEIMVAFDTQFVVIILQRWSAA 105
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A7S2F8W6_9STRA (Dynein light chain roadblock n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8W6_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.080e-36 Identity = 63/100 (63.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQE--TAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPA 318 SEVEETLERIK + GVEGYVIC+ G VLRR+P ++ A +YAE+MR LA KAR VVRD++P+ E++Y+RIRAK HEV+VAFD +FL +VIQ+W+PA Sbjct: 7 SEVEETLERIKEKEGVEGYVICNRHGDVLRRYPNEPKDFQDAAVYAESMRILAWKARSVVRDLDPENELQYLRIRAKTHEVIVAFDLEFLVVVIQKWEPA 106
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Match: A0A7S1XSI3_9STRA (Dynein light chain roadblock n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSI3_9STRA) HSP 1 Score: 127 bits (318), Expect = 7.000e-36 Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 25 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPAGVA 327 S+VEETLERIK++PGV GYVIC+ +G VLRRFP+M+ E A+ YA AM+ LA KA GVVRD+NP ++Y+RIR KR EV+VA D FL IVIQRW PA A Sbjct: 2 SDVEETLERIKMKPGVIGYVICNSDGTVLRRFPSMTPEQAQQYAAAMQKLAAKAGGVVRDMNPTDALEYLRIRCKRQEVVVARDDRFLVIVIQRWMPAEQA 102 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8194.19174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8194.19174.1 >prot_M-pyrifera_M_contig8194.19174.1 ID=prot_M-pyrifera_M_contig8194.19174.1|Name=mRNA_M-pyrifera_M_contig8194.19174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp MLHFSFKQSEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIback to top mRNA from alignment at M-pyrifera_M_contig8194:2629..6585- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8194.19174.1 ID=mRNA_M-pyrifera_M_contig8194.19174.1|Name=mRNA_M-pyrifera_M_contig8194.19174.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3957bp|location=Sequence derived from alignment at M-pyrifera_M_contig8194:2629..6585- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8194:2629..6585- >mRNA_M-pyrifera_M_contig8194.19174.1 ID=mRNA_M-pyrifera_M_contig8194.19174.1|Name=mRNA_M-pyrifera_M_contig8194.19174.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig8194:2629..6585- (Macrocystis pyrifera P11B4 male)back to top |