prot_M-pyrifera_M_contig81924.19168.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig81924.19168.1
Unique Name	prot_M-pyrifera_M_contig81924.19168.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	198

Homology

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3MXX2_9SPIT (Rab GDP dissociation inhibitor n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3MXX2_9SPIT)

HSP 1 Score: 182 bits (461), Expect = 7.060e-52
Identity = 94/199 (47.24%), Postives = 133/199 (66.83%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDC--EGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MADGKLVK L+ T V RYLE   +   D S+V    AG GW+S+ +  + KVPA   EAL + L+GM++K  +  L  ++++   E P+  DG  + + PM  ++K+F ++D+T DF+GHA+ALH+ D Y    A +TIQ ++LY +S  R+G SPFLYP+YGL  LPEAFSR CA+ GGT+MLN  ++E+L  E GKV
Sbjct:   89 MADGKLVKMLLHTKVTRYLEWKCV---DASYVVQHQAG-GWLSSEKMAVCKVPANDMEALKSSLMGMFEKKRVIGLYKYIQNVVPENPMTWDGIDIREAPMKDVFKKFNIEDNTIDFLGHAVALHSQDTYLYEPAIDTIQKMQLYLQSTGRYGQSPFLYPIYGLGGLPEAFSRLCAIHGGTYMLNTNVDEILFDEGGKV 283

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3CUN3_9SPIT (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CUN3_9SPIT)

HSP 1 Score: 171 bits (434), Expect = 3.510e-49
Identity = 89/199 (44.72%), Postives = 130/199 (65.33%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MADGKLVK L+ T V +YLE   +   D S+V     G GW+S+ +  + KVP+   EAL + L+GM++K  +  L  ++++C+   P    G  +   PM  +++++GL+ +T DF+GHA+AL   D Y    A +TIQ ++LY +S+ R+G SPFLYP+YGL  LPEAFSR CA+ GGT+MLNR ++E+L   DGKV
Sbjct:   81 MADGKLVKMLLHTKVTKYLEWKCV---DASYVVQHKKG-GWLSSEKMAVCKVPSNDMEALKSNLMGMFEKKRVINLYKYIENCDLNDPKTWKGIDIKTAPMKDVFEKYGLESNTIDFMGHAVALQYQDNYLFEPAIDTIQKMQLYLQSVGRYGESPFLYPIYGLGGLPEAFSRLCAIHGGTYMLNRNVDEILFDGDGKV 275

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3NTB8_EUPCR (Rab GDP dissociation inhibitor n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NTB8_EUPCR)

HSP 1 Score: 174 bits (442), Expect = 4.070e-49
Identity = 94/200 (47.00%), Postives = 130/200 (65.00%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCEGPVAPDGTVLTDV---PMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA+GKLVK L+ T V +YLE   +   +G++V+  S G G+ S+G   I KVP   SEAL + L+G+W+K   +    +V+D E    PD     D+   PMA ++K+F L+ +T DF+GHA+A+H  D Y    A+ TIQ I+LY  S+ R+G  PFLYP+YGL  +PE FSR CA+ GGT+MLN+ I+EVL G DGKV
Sbjct:   81 MANGKLVKMLLKTTVDKYLEWKTV---EGTYVYQYSKG-GFFSSGGGKIFKVPGNDSEALKSSLMGLWEKKRCKNFFVYVQDIEED-NPDTWGKIDIKAQPMADVFKKFKLEANTIDFIGHAVAMHINDNYLDEPAYLTIQKIKLYIDSIGRYGEHPFLYPIYGLGGIPEGFSRFCAIHGGTYMLNKPIDEVLFGSDGKV 275

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A812YTI1_9DINO (Rab GDP dissociation inhibitor n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YTI1_9DINO)

HSP 1 Score: 172 bits (437), Expect = 4.910e-49
Identity = 93/199 (46.73%), Postives = 125/199 (62.81%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA+GKLVK L+ T V  YL+    NK DG +V+      G          KVPAT+ EA++T L+G +QK  LR+ + +V   E   P   +G   +    A ++ +FGLDD++QDFVGHAMAL   + YK   A E ++A+RLY  SL R+G SPF+YPVYGL  LPE+FSR CAV GG FMLNR ++E +  +DG+V
Sbjct:   38 MANGKLVKILVKTNVSHYLQ---FNKVDGCYVYKSGGNCG----------KVPATEKEAITTGLVGFFQKRKLRKFIIYVSKYEQDDPSTHEGFDCSKQTSAELFAKFGLDDNSQDFVGHAMALFFDETYKEKPALELVKAVRLYGTSLERYGSSPFIYPVYGLGGLPESFSRMCAVHGGVFMLNRDVDEFVYDDDGRV 223

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A2P4YC75_9STRA (Rab GDP dissociation inhibitor (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YC75_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.330e-49
Identity = 93/199 (46.73%), Postives = 131/199 (65.83%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA GKLVK L+ T V RYLE   +   DGS+V         +  GR    KVPAT  EAL + L+GM++K   R+L+ ++ + E   P   +G  L   PM+ +++++G+D +TQ F+GHAMAL   ++Y    A ET++AI+LYA SL R+G SP++YP+YGL  LPE+FSR CA+ GGTFMLNRG++E+L  +DGK 
Sbjct:  100 MACGKLVKMLLHTKVTRYLEFKNV---DGSYV---------VKGGRS--YKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFTQPMSELFEKYGVDANTQSFMGHAMALMRDESYHKRPAIETVRAIKLYAYSLERYGKSPYIYPLYGLGGLPESFSRLCAINGGTFMLNRGVDEILTDKDGKA 284

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A812PB31_9DINO (Rab GDP dissociation inhibitor n=2 Tax=Sar TaxID=2698737 RepID=A0A812PB31_9DINO)

HSP 1 Score: 174 bits (441), Expect = 1.950e-48
Identity = 101/202 (50.00%), Postives = 125/202 (61.88%), Query Frame = 0

Query:    1 MMADGKLVKTLIVTGVVRYLETT-GINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCEGPV-APDGTVLTDVPMAGIYKRF--GLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MMA+G L   L+ T V   ++ T G     G +VFS++ GKGW S G  G+EK+PAT SEA+S+PLL M QK +LR  L FV  CE P   PDGT LT      +Y +F    D D   FVGH MAL  +D Y    A   + AI+LY  S+ R   SPF+YP+YGLSTLPEAFSR CAV+GG FML   ++ +L  EDGKV
Sbjct:  123 MMAEGALKDVLVKTRVHTSIQATAGFAGIGGCYVFSKTLGKGWFSAGAAGVEKLPATPSEAMSSPLLSMAQKLSLRSFLVFVNGCETPQRGPDGTDLTKTTSRQLYAKFFSSSDADLPQFVGHGMALFPSDEYLDRPASNLVAAIQLYRDSIERVKTSPFIYPMYGLSTLPEAFSRLCAVQGGVFMLRTAVKGLLY-EDGKV 323

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A6A5ACM7_9STRA (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACM7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.700e-48
Identity = 96/199 (48.24%), Postives = 126/199 (63.32%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA GKLVK L+ T V RYLE   +   DGS+V+  S            I KVPAT  EALS+ L+G+++K   R L+ FV + E   P    G  L   PM+ +Y +FG+D +TQ F GHAMAL   D Y    A ET++A+++Y+ SL R+G SP++YP+YGL  LPE FSR CA+ GGTFMLNRG++EVL  +DGK 
Sbjct:   15 MACGKLVKILLHTKVTRYLEFKNV---DGSYVYKGSR-----------IYKVPATGEEALSSSLMGIFEKRRFRGLIMFVYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRALKMYSYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVLF-KDGKA 198

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A139AZ52_GONPJ (Rab GDP dissociation inhibitor n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZ52_GONPJ)

HSP 1 Score: 171 bits (433), Expect = 6.780e-48
Identity = 88/199 (44.22%), Postives = 131/199 (65.83%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVK--DCEGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA+G+ VK L+ T V RYLE     +  GS+V+          +GR  I KVP ++ EA+S+PL+G+++K   +    F++  + + P   +G  +  VPM+ IYK+FGL+  TQDF+GHAMALH  D+Y    A +T + IRLY  SLAR+G SP++YP+YGL  LP++F+R  A+ GGT+MLN+ ++E++ G DGKV
Sbjct:   81 MANGEFVKILVYTDVTRYLE---FKQVSGSYVYR---------DGR--IAKVPGSEIEAVSSPLMGIFEKRRAKRFFEFIQKYELDNPATQEGIDVKTVPMSEIYKKFGLEPGTQDFIGHAMALHLDDSYLTEPALQTYENIRLYMGSLARYGKSPYIYPMYGLGDLPQSFARLSAIYGGTYMLNKTVDEIVYGPDGKV 265

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S1CP58_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP58_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.050e-47
Identity = 95/192 (49.48%), Postives = 123/192 (64.06%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVK--DCEGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVL 191
            MADG LVK LI TGV  YL+     +  GS+V        W S G  G+ KVPAT+ EA+ST L+G +QK   R  L FV   D +     DG  L    MA +Y +FGLD++TQDF GHA A+ T D+Y    A ET++A++LYA SL R+G SPF+YP+YG+  LPE FSR CA+ GGTF+LN+ +EEV+
Sbjct:  155 MADGALVKILIYTGVNNYLD---FKQIAGSYV--------WKSGG--GVHKVPATEVEAVSTGLMGFFQKRKFRNFLQFVAKADPDDESTWDGFDLKARTMAELYDKFGLDENTQDFTGHAFAMFTDDSYLAKPAMETLKAVKLYATSLDRYGTSPFIYPIYGIGGLPEGFSRLCAIHGGTFILNKSVEEVI 333

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BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A024FZZ5_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.060e-47
Identity = 97/199 (48.74%), Postives = 130/199 (65.33%), Query Frame = 0

Query:    2 MADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 198
            MA GKLVK L+ T V RYLE   +   DGS+V         + NG+    KVPAT  EAL + L+G+++K   R+L+ ++ + E   P   +G  L   PM+ +Y++FG+D +TQ F+GHAMAL T D Y G  A ETI+AI+LYA SL R+G SP+LYP+YGL  LPE FSR CA+ GGTFMLNRG++E+L    G+ 
Sbjct:  100 MACGKLVKMLLHTKVTRYLEFKNV---DGSYV---------VKNGKS--YKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDDPKTFEGLDLKKQPMSQVYEKFGVDANTQSFMGHAMALWTDDRYLGKPAIETIRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDATGRA 284

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3MXX2_9SPIT	7.060e-52	47.24	Rab GDP dissociation inhibitor n=1 Tax=Strombidium...	[more]
A0A7S3CUN3_9SPIT	3.510e-49	44.72	Rab GDP dissociation inhibitor (Fragment) n=1 Tax=...	[more]
A0A7S3NTB8_EUPCR	4.070e-49	47.00	Rab GDP dissociation inhibitor n=1 Tax=Euplotes cr...	[more]
A0A812YTI1_9DINO	4.910e-49	46.73	Rab GDP dissociation inhibitor n=1 Tax=Symbiodiniu...	[more]
A0A2P4YC75_9STRA	6.330e-49	46.73	Rab GDP dissociation inhibitor (Fragment) n=2 Tax=...	[more]
A0A812PB31_9DINO	1.950e-48	50.00	Rab GDP dissociation inhibitor n=2 Tax=Sar TaxID=2...	[more]
A0A6A5ACM7_9STRA	2.700e-48	48.24	Rab GDP dissociation inhibitor (Fragment) n=1 Tax=...	[more]
A0A139AZ52_GONPJ	6.780e-48	44.22	Rab GDP dissociation inhibitor n=1 Tax=Gonapodya p...	[more]
A0A7S1CP58_9STRA	1.050e-47	49.48	Rab GDP dissociation inhibitor n=1 Tax=Bicosoecida...	[more]
A0A024FZZ5_9STRA	1.060e-47	48.74	Rab GDP dissociation inhibitor n=1 Tax=Albugo cand...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000806	Rab GDI protein	PRINTS	PR00892	RABGDI	coord: 60..75 score: 39.67 coord: 115..129 score: 64.93
IPR018203	GDP dissociation inhibitor	PRINTS	PR00891	RABGDIREP	coord: 144..161 score: 50.79 coord: 162..183 score: 55.19 coord: 7..23 score: 50.63
IPR018203	GDP dissociation inhibitor	PFAM	PF00996	GDI	coord: 1..198 e-value: 1.1E-55 score: 188.9
IPR018203	GDP dissociation inhibitor	PANTHER	PTHR11787	RAB GDP-DISSOCIATION INHIBITOR	coord: 1..198
None	No IPR available	GENE3D	1.10.405.10		coord: 53..155 e-value: 1.8E-28 score: 100.8
None	No IPR available	PANTHER	PTHR11787:SF8	RAB GDP DISSOCIATION INHIBITOR	coord: 1..198
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 2..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig81924	contig	M-pyrifera_M_contig81924:327..920 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig81924.19168.1	mRNA_M-pyrifera_M_contig81924.19168.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig81924 315..920 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig81924.19168.1 ID=prot_M-pyrifera_M_contig81924.19168.1|Name=mRNA_M-pyrifera_M_contig81924.19168.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
MMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGI
EKVPATQSEALSTPLLGMWQKNALRELLGFVKDCEGPVAPDGTVLTDVPM
AGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLAR
HGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000806	RabGDI
IPR018203	GDP_dissociation_inhibitor
IPR036188	FAD/NAD-bd_sf