mRNA_M-pyrifera_M_contig81924.19168.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3MXX2_9SPIT (Rab GDP dissociation inhibitor n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3MXX2_9SPIT) HSP 1 Score: 190 bits (482), Expect = 6.370e-55 Identity = 97/204 (47.55%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDC--EGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MADGKLVK L+ T V RYLE + D S+V AG GW+S+ + + KVPA EAL + L+GM++K + L ++++ E P+ DG + + PM ++K+F ++D+T DF+GHA+ALH+ D Y A +TIQ ++LY +S R+G SPFLYP+YGL LPEAFSR CA+ GGT+MLN ++E+L E GKV Sbjct: 84 IPKFIMADGKLVKMLLHTKVTRYLEWKCV---DASYVVQHQAG-GWLSSEKMAVCKVPANDMEALKSSLMGMFEKKRVIGLYKYIQNVVPENPMTWDGIDIREAPMKDVFKKFNIEDNTIDFLGHAVALHSQDTYLYEPAIDTIQKMQLYLQSTGRYGQSPFLYPIYGLGGLPEAFSRLCAIHGGTYMLNTNVDEILFDEGGKV 283
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3CUN3_9SPIT (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CUN3_9SPIT) HSP 1 Score: 179 bits (455), Expect = 2.900e-52 Identity = 92/204 (45.10%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MADGKLVK L+ T V +YLE + D S+V G GW+S+ + + KVP+ EAL + L+GM++K + L ++++C+ P G + PM +++++GL+ +T DF+GHA+AL D Y A +TIQ ++LY +S+ R+G SPFLYP+YGL LPEAFSR CA+ GGT+MLNR ++E+L DGKV Sbjct: 76 IPKFIMADGKLVKMLLHTKVTKYLEWKCV---DASYVVQHKKG-GWLSSEKMAVCKVPSNDMEALKSNLMGMFEKKRVINLYKYIENCDLNDPKTWKGIDIKTAPMKDVFEKYGLESNTIDFMGHAVALQYQDNYLFEPAIDTIQKMQLYLQSVGRYGESPFLYPIYGLGGLPEAFSRLCAIHGGTYMLNRNVDEILFDGDGKV 275
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A2P4YC75_9STRA (Rab GDP dissociation inhibitor (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YC75_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.590e-52 Identity = 97/204 (47.55%), Postives = 136/204 (66.67%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 VPKF+MA GKLVK L+ T V RYLE + DGS+V + GR KVPAT EAL + L+GM++K R+L+ ++ + E P +G L PM+ +++++G+D +TQ F+GHAMAL ++Y A ET++AI+LYA SL R+G SP++YP+YGL LPE+FSR CA+ GGTFMLNRG++E+L +DGK Sbjct: 95 VPKFIMACGKLVKMLLHTKVTRYLEFKNV---DGSYV---------VKGGRS--YKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFTQPMSELFEKYGVDANTQSFMGHAMALMRDESYHKRPAIETVRAIKLYAYSLERYGKSPYIYPLYGLGGLPESFSRLCAINGGTFMLNRGVDEILTDKDGKA 284
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S3NTB8_EUPCR (Rab GDP dissociation inhibitor n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NTB8_EUPCR) HSP 1 Score: 182 bits (463), Expect = 3.720e-52 Identity = 97/205 (47.32%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCEGPVAPDGTVLTDV---PMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MA+GKLVK L+ T V +YLE + +G++V+ S G G+ S+G I KVP SEAL + L+G+W+K + +V+D E PD D+ PMA ++K+F L+ +T DF+GHA+A+H D Y A+ TIQ I+LY S+ R+G PFLYP+YGL +PE FSR CA+ GGT+MLN+ I+EVL G DGKV Sbjct: 76 IPKFVMANGKLVKMLLKTTVDKYLEWKTV---EGTYVYQYSKG-GFFSSGGGKIFKVPGNDSEALKSSLMGLWEKKRCKNFFVYVQDIEED-NPDTWGKIDIKAQPMADVFKKFKLEANTIDFIGHAVAMHINDNYLDEPAYLTIQKIKLYIDSIGRYGEHPFLYPIYGLGGIPEGFSRFCAIHGGTYMLNKPIDEVLFGSDGKV 275
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A812YTI1_9DINO (Rab GDP dissociation inhibitor n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YTI1_9DINO) HSP 1 Score: 181 bits (458), Expect = 4.220e-52 Identity = 96/204 (47.06%), Postives = 130/204 (63.73%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MA+GKLVK L+ T V YL+ NK DG +V+ G KVPAT+ EA++T L+G +QK LR+ + +V E P +G + A ++ +FGLDD++QDFVGHAMAL + YK A E ++A+RLY SL R+G SPF+YPVYGL LPE+FSR CAV GG FMLNR ++E + +DG+V Sbjct: 33 IPKFIMANGKLVKILVKTNVSHYLQ---FNKVDGCYVYKSGGNCG----------KVPATEKEAITTGLVGFFQKRKLRKFIIYVSKYEQDDPSTHEGFDCSKQTSAELFAKFGLDDNSQDFVGHAMALFFDETYKEKPALELVKAVRLYGTSLERYGSSPFIYPVYGLGGLPESFSRMCAVHGGVFMLNRDVDEFVYDDDGRV 223
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A812PB31_9DINO (Rab GDP dissociation inhibitor n=2 Tax=Sar TaxID=2698737 RepID=A0A812PB31_9DINO) HSP 1 Score: 182 bits (462), Expect = 1.910e-51 Identity = 104/206 (50.49%), Postives = 129/206 (62.62%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETT-GINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCEGPV-APDGTVLTDVPMAGIYKRF--GLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKFMMA+G L L+ T V ++ T G G +VFS++ GKGW S G G+EK+PAT SEA+S+PLL M QK +LR L FV CE P PDGT LT +Y +F D D FVGH MAL +D Y A + AI+LY S+ R SPF+YP+YGLSTLPEAFSR CAV+GG FML ++ +L EDGKV Sbjct: 119 IPKFMMAEGALKDVLVKTRVHTSIQATAGFAGIGGCYVFSKTLGKGWFSAGAAGVEKLPATPSEAMSSPLLSMAQKLSLRSFLVFVNGCETPQRGPDGTDLTKTTSRQLYAKFFSSSDADLPQFVGHGMALFPSDEYLDRPASNLVAAIQLYRDSIERVKTSPFIYPMYGLSTLPEAFSRLCAVQGGVFMLRTAVKGLLY-EDGKV 323
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A6A5ACM7_9STRA (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACM7_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.240e-51 Identity = 99/204 (48.53%), Postives = 131/204 (64.22%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MA GKLVK L+ T V RYLE + DGS+V+ S I KVPAT EALS+ L+G+++K R L+ FV + E P G L PM+ +Y +FG+D +TQ F GHAMAL D Y A ET++A+++Y+ SL R+G SP++YP+YGL LPE FSR CA+ GGTFMLNRG++EVL +DGK Sbjct: 10 IPKFIMACGKLVKILLHTKVTRYLEFKNV---DGSYVYKGSR-----------IYKVPATGEEALSSSLMGIFEKRRFRGLIMFVYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRALKMYSYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVLF-KDGKA 198
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A7S1CP58_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP58_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.030e-50 Identity = 98/197 (49.75%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVK--DCEGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVL 585 +PKF+MADG LVK LI TGV YL+ + GS+V W S G G+ KVPAT+ EA+ST L+G +QK R L FV D + DG L MA +Y +FGLD++TQDF GHA A+ T D+Y A ET++A++LYA SL R+G SPF+YP+YG+ LPE FSR CA+ GGTF+LN+ +EEV+ Sbjct: 150 IPKFIMADGALVKILIYTGVNNYLD---FKQIAGSYV--------WKSGG--GVHKVPATEVEAVSTGLMGFFQKRKFRNFLQFVAKADPDDESTWDGFDLKARTMAELYDKFGLDENTQDFTGHAFAMFTDDSYLAKPAMETLKAVKLYATSLDRYGTSPFIYPIYGIGGLPEGFSRLCAIHGGTFILNKSVEEVI 333
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A024FZZ5_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ5_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.150e-50 Identity = 100/204 (49.02%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVKDCE--GPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF+MA GKLVK L+ T V RYLE + DGS+V + NG+ KVPAT EAL + L+G+++K R+L+ ++ + E P +G L PM+ +Y++FG+D +TQ F+GHAMAL T D Y G A ETI+AI+LYA SL R+G SP+LYP+YGL LPE FSR CA+ GGTFMLNRG++E+L G+ Sbjct: 95 IPKFIMACGKLVKMLLHTKVTRYLEFKNV---DGSYV---------VKNGKS--YKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDDPKTFEGLDLKKQPMSQVYEKFGVDANTQSFMGHAMALWTDDRYLGKPAIETIRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDATGRA 284
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Match: A0A139AZ52_GONPJ (Rab GDP dissociation inhibitor n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZ52_GONPJ) HSP 1 Score: 178 bits (452), Expect = 1.220e-50 Identity = 91/204 (44.61%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 1 VPKFMMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIEKVPATQSEALSTPLLGMWQKNALRELLGFVK--DCEGPVAPDGTVLTDVPMAGIYKRFGLDDDTQDFVGHAMALHTTDAYKGHKAWETIQAIRLYAKSLARHGGSPFLYPVYGLSTLPEAFSRDCAVRGGTFMLNRGIEEVLRGEDGKV 606 +PKF MA+G+ VK L+ T V RYLE + GS+V+ +GR I KVP ++ EA+S+PL+G+++K + F++ + + P +G + VPM+ IYK+FGL+ TQDF+GHAMALH D+Y A +T + IRLY SLAR+G SP++YP+YGL LP++F+R A+ GGT+MLN+ ++E++ G DGKV Sbjct: 76 IPKFAMANGEFVKILVYTDVTRYLE---FKQVSGSYVYR---------DGR--IAKVPGSEIEAVSSPLMGIFEKRRAKRFFEFIQKYELDNPATQEGIDVKTVPMSEIYKKFGLEPGTQDFIGHAMALHLDDSYLTEPALQTYENIRLYMGSLARYGKSPYIYPMYGLGDLPQSFARLSAIYGGTYMLNKTVDEIVYGPDGKV 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81924.19168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81924.19168.1 >prot_M-pyrifera_M_contig81924.19168.1 ID=prot_M-pyrifera_M_contig81924.19168.1|Name=mRNA_M-pyrifera_M_contig81924.19168.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp MMADGKLVKTLIVTGVVRYLETTGINKTDGSFVFSQSAGKGWISNGRPGIback to top mRNA from alignment at M-pyrifera_M_contig81924:315..920+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81924.19168.1 ID=mRNA_M-pyrifera_M_contig81924.19168.1|Name=mRNA_M-pyrifera_M_contig81924.19168.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig81924:315..920+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81924:315..920+ >mRNA_M-pyrifera_M_contig81924.19168.1 ID=mRNA_M-pyrifera_M_contig81924.19168.1|Name=mRNA_M-pyrifera_M_contig81924.19168.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig81924:315..920+ (Macrocystis pyrifera P11B4 male)back to top |