prot_M-pyrifera_M_contig8186.19155.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8186.19155.1
Unique Name	prot_M-pyrifera_M_contig8186.19155.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	237

Homology

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BLAST of mRNA_M-pyrifera_M_contig8186.19155.1 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.560e-98
Identity = 160/241 (66.39%), Postives = 192/241 (79.67%), Query Frame = 0

Query:    1 MVVWAGGEAAATGVSTALVAVGVSSVVAPVVAVIVLVGHVIIKGTALAVKKRLQVRTEQKAHFEDLSLTE--ARTSD-HFTIFIHGTRAPGECSAYVSSTDYRSHAPVSADALNGISKLIGGSAKCNVRDMGGFTENLPTPFNVRISMPDVIALMRQSWTYERFCKTKCGSMTIVVLRSQNS--KAKLRVAWDNSGSPDCCKAKVYTVEEWKKTPFAGKTTTMPEKVADVDMALDRTLVFE 236
            +V WAGGEAA+TGVS A+VA G++++VAP VAVIVLVGHVI++G+  AVKK+L+VR EQKAH E L+LTE  AR+S  HFT+ ++G    GE ++YVS  D  S+  VS   L GISKLI G+  CNVRDMGG+TE    PF VRISMPDV+ALMRQSW YERFC+TKCG+MT+VVLRSQ+S  K KLRVAW+NSGS D  KA+VYT  EWKKT FAGKT TMPE +ADVDMALD+TLVF+
Sbjct:   55 IVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTETTARSSSGHFTVVLNGVGPNGEFNSYVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD 295

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8186.19155.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8186.19155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L9N5_9PHAE	1.560e-98	66.39	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..16
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 43..236
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 17..42
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8186	contig	M-pyrifera_M_contig8186:1508..3151 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8186.19155.1	mRNA_M-pyrifera_M_contig8186.19155.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8186 1508..3175 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8186.19155.1 ID=prot_M-pyrifera_M_contig8186.19155.1|Name=mRNA_M-pyrifera_M_contig8186.19155.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp
MVVWAGGEAAATGVSTALVAVGVSSVVAPVVAVIVLVGHVIIKGTALAVK
KRLQVRTEQKAHFEDLSLTEARTSDHFTIFIHGTRAPGECSAYVSSTDYR
SHAPVSADALNGISKLIGGSAKCNVRDMGGFTENLPTPFNVRISMPDVIA
LMRQSWTYERFCKTKCGSMTIVVLRSQNSKAKLRVAWDNSGSPDCCKAKV
YTVEEWKKTPFAGKTTTMPEKVADVDMALDRTLVFE*