mRNA_M-pyrifera_M_contig81807.19148.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: A0A661D5B6_9GAMM (Nitroreductase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661D5B6_9GAMM) HSP 1 Score: 157 bits (398), Expect = 2.530e-47 Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 1 Query: 1 HMRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLEGR 378 H++ ++L G+ + +A+ SC Q+IAAD AFSLGML + P YRRLFWE G IGQ LYLEAEA G TGIGCYFDD+VH+L+GL +Q MYHFTVG D RL+TLPPYAHLEG+ Sbjct: 8 HLQFYQLVSGNAQTIAQQMSCHQEIAADSAFSLGMLAEFETGLAVGPFGYRRLFWEAGIIGQVLYLEAEAVGVRGTGIGCYFDDAVHSLLGLADTHYQSMYHFTVGTPQHDKRLQTLPPYAHLEGK 133
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: UPI0004B2A726 (SagB/ThcOx family dehydrogenase n=1 Tax=Methylomicrobium lacus TaxID=136992 RepID=UPI0004B2A726) HSP 1 Score: 164 bits (416), Expect = 8.420e-46 Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 1 Query: 10 LFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLEGR 378 ++RL G+C+ +A++ SC QDIA DGAFSL ML + R+P YRRLFWECG IGQALYLEAEAAG TGIGC+FDDSVH ++GL + +Q +YHFTVG A EDARL+TLP Y HL R Sbjct: 416 VYRLVAGNCQRMAKTVSCHQDIAGDGAFSLAMLAEFQQPISREPWCYRRLFWECGLIGQALYLEAEAAGMRGTGIGCFFDDSVHDILGLKDNRFQSLYHFTVGQALEDARLQTLPAYHHLSQR 538
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: A0A3C1VDW2_9BACT (Nitroreductase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A3C1VDW2_9BACT) HSP 1 Score: 164 bits (416), Expect = 8.540e-46 Identity = 79/123 (64.23%), Postives = 90/123 (73.17%), Query Frame = 1 Query: 10 LFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVV-ERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLEG 375 L+RL KG AR+ SC QDIAADGAFSLGML R PV+ +R +AYR LFWE G IGQALYL AEAAG TGIGCYFDD +H +GL G+ WQ +YHFT+G ED RLRT+PPYAH G Sbjct: 415 LYRLGKGDLRDFARTLSCHQDIAADGAFSLGMLARFEPVLRDRGAAAYRELFWEAGMIGQALYLAAEAAGVRGTGIGCYFDDVLHRALGLAGNDWQSLYHFTIGGPVEDLRLRTVPPYAHRAG 537
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: A0A496V2S4_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496V2S4_9GAMM) HSP 1 Score: 156 bits (394), Expect = 1.440e-45 Identity = 74/124 (59.68%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 1 HMRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLE 372 H+ ++L G + V + SC Q+IAAD AFSLGML ++ P YRRLFWE G IGQ LYLEAEA G TGIGCYFDD+VHAL+GLTG +Q MYHFTVG D RL+TLPPYAHL+ Sbjct: 96 HLPFYQLVSGDAQTVVQQISCHQEIAADSAFSLGMLAEFEESLKNRPWGYRRLFWEAGIIGQVLYLEAEAVGVRGTGIGCYFDDAVHALLGLTGTCYQSMYHFTVGSPLIDKRLQTLPPYAHLD 219
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: A0A257NFL8_9GAMM (Nitroreductase (Fragment) n=1 Tax=Methylococcaceae bacterium NSO1 TaxID=1917483 RepID=A0A257NFL8_9GAMM) HSP 1 Score: 155 bits (393), Expect = 2.560e-45 Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 10 LFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLE 372 L+ L G C+ +A++ SC Q IA+D AF+LGM+ +E P YRRLFWECG IGQ LYLEAEAAG TGIGCYFDDSVH L+G D +Q +YHFTVG ED RL TLP Y HL+ Sbjct: 104 LYHLSSGECKQIAKTVSCHQPIASDSAFTLGMVAEFSETIETAPWLYRRLFWECGLIGQVLYLEAEAAGIRGTGIGCYFDDSVHELLGFKDDKFQSLYHFTVGKPLEDKRLETLPAYGHLK 224
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: G2E8A0_9GAMM (Nitroreductase (Fragment) n=1 Tax=Thiorhodococcus drewsii AZ1 TaxID=765913 RepID=G2E8A0_9GAMM) HSP 1 Score: 159 bits (403), Expect = 3.040e-45 Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 1 HMRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLEGRS 381 H+ L+RL +G AR+ SC QDIA+DG F++ ML +E P YR LFWECG IGQ LYLEAEAAG TGIGC+FDD+VH L+G+ WQ +YHFTVG ED RLRT PPYAHL+ RS Sbjct: 243 HLGLYRLVEGDARNAARALSCHQDIASDGCFAVAMLADFDAALEHGPWRYRELFWECGLIGQILYLEAEAAGLRGTGIGCFFDDAVHDLLGIQDRRWQSLYHFTVGGPVEDPRLRTEPPYAHLDERS 369
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: UPI001922141E (SagB/ThcOx family dehydrogenase n=1 Tax=Methylomicrobium sp. RS1 TaxID=2802053 RepID=UPI001922141E) HSP 1 Score: 163 bits (412), Expect = 3.070e-45 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 10 LFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLE 372 L+RL G+ A++ SC Q IA+D AFSLGML + ++ +P YRRLFWECG +GQ LYLEAEAAG TGIGC+FDD+VH ++GLT D WQ +YHFTVG A EDARL++LPPY HL+ Sbjct: 415 LYRLFAGNVRQAAKTLSCHQSIASDSAFSLGMLAQFADNIDAEPWRYRRLFWECGLLGQILYLEAEAAGVRGTGIGCFFDDAVHGVLGLTDDRWQSLYHFTVGEALEDARLQSLPPYGHLQ 535
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: UPI001E40236C (nitroreductase family protein n=1 Tax=Acidihalobacter yilgarnensis TaxID=2819280 RepID=UPI001E40236C) HSP 1 Score: 153 bits (386), Expect = 6.040e-44 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 1 HMRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHL 369 H+ L+R+++G AR+ SC QDIAADGAFSL ML+ + + P YR+LFWE G +GQ LYLEAEAAG TGIGC+FDD VH L+G+ G Q +YHFT+G A DARL+TLP YAHL Sbjct: 125 HLALYRMQEGDARAAARTLSCHQDIAADGAFSLAMLSEFERDLTQAPWCYRQLFWEAGMLGQTLYLEAEAAGLRGTGIGCFFDDPVHELIGIEGTALQSLYHFTIGGAHVDARLQTLPAYAHL 247
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: G3IZ92_METTV (Nitroreductase n=4 Tax=Methylobacter tundripaludum TaxID=173365 RepID=G3IZ92_METTV) HSP 1 Score: 159 bits (402), Expect = 9.810e-44 Identity = 73/121 (60.33%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 10 LFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLE 372 L+ L G C +A++ SC Q IA+D AFSLGM+ G +E P YRRLFWECG IGQ LYLEAEAAG TGIGCYFDDSVH L+G D +Q +YHFTVG ED RL TLP Y HL+ Sbjct: 421 LYHLHSGDCRQIAKTLSCHQPIASDSAFSLGMVAEFGETIEAAPWLYRRLFWECGLIGQTLYLEAEAAGLRGTGIGCYFDDSVHELLGFKDDKFQSLYHFTVGKPLEDKRLETLPAYGHLD 541
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Match: A0A0F7KFS7_9PROT (Nitroreductase n=4 Tax=Nitrosomonas TaxID=914 RepID=A0A0F7KFS7_9PROT) HSP 1 Score: 159 bits (401), Expect = 1.330e-43 Identity = 76/126 (60.32%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 1 HMRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRRLFWECGAIGQALYLEAEAAGQNATGIGCYFDDSVHALVGLTGDTWQVMYHFTVGVAAEDARLRTLPPYAHLEGR 378 H+ LFRL G AR SC QDIAAD FSLGML + YR LF E G IGQ LYLEAEAAG TGIGCYFDD++H+++GL+G WQ +YHFTVG A +D+RLRTLPPYAHL GR Sbjct: 414 HLGLFRLFAGDVRDTARLISCHQDIAADSCFSLGMLAEFETALNEGAWHYRELFHEAGMIGQVLYLEAEAAGLRGTGIGCYFDDALHSMLGLSGHAWQSLYHFTVGGALDDSRLRTLPPYAHLSGR 539 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81807.19148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81807.19148.1 >prot_M-pyrifera_M_contig81807.19148.1 ID=prot_M-pyrifera_M_contig81807.19148.1|Name=mRNA_M-pyrifera_M_contig81807.19148.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp MRLFRLRKGHCEGVARSASCQQDIAADGAFSLGMLTRLGPVVERDPSAYRback to top mRNA from alignment at M-pyrifera_M_contig81807:531..917- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81807.19148.1 ID=mRNA_M-pyrifera_M_contig81807.19148.1|Name=mRNA_M-pyrifera_M_contig81807.19148.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig81807:531..917- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81807:531..917- >mRNA_M-pyrifera_M_contig81807.19148.1 ID=mRNA_M-pyrifera_M_contig81807.19148.1|Name=mRNA_M-pyrifera_M_contig81807.19148.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig81807:531..917- (Macrocystis pyrifera P11B4 male)back to top |