mRNA_M-pyrifera_M_contig81804.19145.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A6B2KW35_9EUKA (Sister chromatid cohesion protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KW35_9EUKA) HSP 1 Score: 154 bits (390), Expect = 1.930e-38 Identity = 105/299 (35.12%), Postives = 153/299 (51.17%), Query Frame = 1 Query: 16 TSVALPLLVCESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQ-SCG----RSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAW-----QVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKECRLFSL--APKDDSEEQTQGS----CSCGQVLVN---RFMLSCERCGTWFHGECMGVDPNNVPSEWHCRPCRTILRALESVGEMSED 855 T++ LP E + QL A+ V+ ++F RY HRGMI DLF+ L KLPT KR LR Y++ + K IQ++SA ++ +Q S G + SD S +N Y A A + F++ + TA + EYR IL NL +D L +LP WP +E+LLSVL + + ++ E LR ++ Q LG +A++++Q+ KE LF A K + + G C C Q + M+ C+RC WFH EC+ VD N P W+C PC ILR + + D Sbjct: 183 TAITLPTFFVEGIYSTQLSALNVIRAIFSRYPKHRGMILDDLFNDLIKLPTSKRDLRNYQLVDQKKS--IQMVSALLMHCIQCSAGIPKEKDSDNESEGVNSYTVAIMCANNFIQSFMKNCISTNTAQSNKEKEAEYRTILSNLVEDLLTTLNLPEWPSSELLLSVLGRNLVQNVVKKDTN----EALRMLSIQLLGTIASRVQQDVILCKESTLFVFPKARKLNEDGSVVGGEIDECICKQTIEGISTASMIDCDRCRRWFHCECVAVDQVNPPKTWYCDPC-LILRQINQHKKQLHD 474
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: UPI001C41EEB2 (nipped-B-like protein B isoform X1 n=4 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41EEB2) HSP 1 Score: 116 bits (290), Expect = 3.620e-25 Identity = 76/227 (33.48%), Postives = 124/227 (54.63%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQSCGR-------------SSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQTQ 672 E+ LQL AI ++ +VF RY+ HR +I +++F SL +LPTGKR LR +R+ ++G+ V+IQ+++A VL ++Q R D + N YE A +A+ L++F++K +K + +YR + EN D L + P WP AE+LLS+L + L Q + LR + LG VA++LR++A ++K R+ +P +D +Q Q Sbjct: 1380 ENVSELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTGKRSLRNFRINSDGENVYIQMVTALVLQLIQCVVRLPYEREEADESKKKVDKDVFITNSYETAMRTAQNFLSVFLKKCGSKQG--EEDYRPLFENFVHDLLSAVNRPEWPAAELLLSLLGRL----LVHQFSNKQTEMALRVASLDYLGTVASRLRKDAVNSKMDQKAIDRILRESPGNDEIQQLQ 1600
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A267DR52_9PLAT (Nipped-B protein n=6 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DR52_9PLAT) HSP 1 Score: 112 bits (279), Expect = 9.770e-24 Identity = 72/198 (36.36%), Postives = 112/198 (56.57%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQSC---------GRSSDGTSWA--LNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEA 606 E+ E LQL A+ + SVF +Y+ HR +I +DLF SL +LP+ KR LR +R+ +E IQ+++A LL++QS + D T+ L+ YE+A +A+V L +F+ K KA + +YR I E +D LL + P WP AE+ LS+L G+ + A + + LR + LG VA++LR++A Sbjct: 672 ENVENLQLSALRLCTSVFCQYEKHRQLILEDLFASLARLPSSKRSLRSFRLNSEES---IQMLTALSLLLVQSVVLLPAKVPSSKDQDNTAAMALLDAYESAKKTAQVFLVVFLNKCAKKAE--EQDYRGIFEKFVEDLLLAVNKPEWPAAEMFLSLLGGLLVKQFADRSVD----QALRVASLDYLGTVASRLRKDA 860
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A822HM29_9NEOB (Nipped-B protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822HM29_9NEOB) HSP 1 Score: 111 bits (277), Expect = 1.710e-23 Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 666 E+ LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ + +G+ ++IQ+++A VL ++Q + D + N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K R+ APK + E Q Sbjct: 232 ENVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDREHAEEESNKKIDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVSSKMDQGSIDRILKQAPKGEDEIQ 454
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A7K9E5S5_BARMA (NIPBL protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K9E5S5_BARMA) HSP 1 Score: 106 bits (264), Expect = 2.400e-23 Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRV---ETEGKVVFIQVISAAVLLMLQ----------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 618 E+ LQL AI ++ +VF RY+ HR +I +++F SL +LPT KR LR +R+ +T+G+ ++IQ+++A VL ++Q + D N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K Sbjct: 12 ENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEELNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 215
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A8C5P6K7_9ANUR (Nipped-B protein n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5P6K7_9ANUR) HSP 1 Score: 110 bits (276), Expect = 2.520e-23 Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 666 E+ LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ + +G+ ++IQ+++A VL ++Q + D + N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K R+ APK + E Q Sbjct: 1577 ENVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDREHAEEESNKKVDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSKMDQGSIDRILKQAPKGEDEIQ 1799
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A7K5MAR7_CARCD (NIPBL protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K5MAR7_CARCD) HSP 1 Score: 106 bits (264), Expect = 2.870e-23 Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRV---ETEGKVVFIQVISAAVLLMLQ----------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 618 E+ LQL AI ++ +VF RY+ HR +I +++F SL +LPT KR LR +R+ +T+G+ ++IQ+++A VL ++Q + D N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K Sbjct: 63 ENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 266
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A8J6FJD8_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FJD8_ELECQ) HSP 1 Score: 110 bits (275), Expect = 3.270e-23 Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 666 ES LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ + +G+ ++IQ+++A VL ++Q + D + N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K R+ AP+ + E Q Sbjct: 1430 ESVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPFDKENIEEESNKKIDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSKMDQGSIDRILKQAPEGEDEIQ 1652
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: UPI0008545AAE (nipped-B-like protein isoform X1 n=5 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008545AAE) HSP 1 Score: 110 bits (275), Expect = 3.400e-23 Identity = 69/208 (33.17%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 618 E+ LQL AI + +VF RY+ HR +I ++LF SL +LPT KR LR +R+ + +G+ ++IQ+++A VL ++Q C + D + N YE A +A+ L++F++K +K + +YR + EN QD L + P WP AE+LLS+L + + + + + LR + LG VA +LR++A +K Sbjct: 1518 ENVSELQLCAIKQVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDRDHAEEECNKKVDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 1719
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A1A8NRQ9_9TELE (Nipped-B protein (Fragment) n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8NRQ9_9TELE) HSP 1 Score: 109 bits (273), Expect = 5.740e-23 Identity = 76/230 (33.04%), Postives = 120/230 (52.17%), Query Frame = 1 Query: 46 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYR---VETEGKVVFIQVISAAVLLMLQSC-------------GRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQTQ 672 E+ LQL AI ++ +VF RY+ HR +I +D+F SL KLPT KR LR +R ++++G+ ++IQ++SA VL ++Q + D + N YE A +A+ L++F++K +K + +YR + EN D L P WP AE+LLS+L + L Q + LR + LG VA++LR++A +K R+ P D +Q Q Sbjct: 92 ENVSELQLCAITLVTAVFSRYEKHRQLILEDIFTSLAKLPTSKRNLRNFRLNSIDSDGEPLYIQMVSALVLQLIQCVVHFPSEKEAEEGQNKKLDRDALITNTYETAMRTAQNFLSVFLKKCGSKQG--EEDYRPLFENFVHDLLSAVSKPEWPAAELLLSLLGRL----LVHQFSNKQTEMALRVASLDYLGTVASRLRKDALTSKMNQRAIDRILKETPGSDEVQQLQ 315 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81804.19145.1 >prot_M-pyrifera_M_contig81804.19145.1 ID=prot_M-pyrifera_M_contig81804.19145.1|Name=mRNA_M-pyrifera_M_contig81804.19145.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp VVCRITSVALPLLVCESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSback to top mRNA from alignment at M-pyrifera_M_contig81804:1..915+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81804.19145.1 ID=mRNA_M-pyrifera_M_contig81804.19145.1|Name=mRNA_M-pyrifera_M_contig81804.19145.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=915bp|location=Sequence derived from alignment at M-pyrifera_M_contig81804:1..915+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81804:1..915+ >mRNA_M-pyrifera_M_contig81804.19145.1 ID=mRNA_M-pyrifera_M_contig81804.19145.1|Name=mRNA_M-pyrifera_M_contig81804.19145.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1830bp|location=Sequence derived from alignment at M-pyrifera_M_contig81804:1..915+ (Macrocystis pyrifera P11B4 male)back to top |