prot_M-pyrifera_M_contig81550.19083.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81550.19083.1
Unique Nameprot_M-pyrifera_M_contig81550.19083.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
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BLAST of mRNA_M-pyrifera_M_contig81550.19083.1 vs. uniprot
Match: A0A353ZEA6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353ZEA6_9PLAN)

HSP 1 Score: 53.5 bits (127), Expect = 2.810e-6
Identity = 32/88 (36.36%), Postives = 44/88 (50.00%), Query Frame = 0 
Query:    2 IAGIAPITDTGGTFRLR--HFVGDGVGIQDSSSSLGAFLPLSASDEFLFFDGQYSLTNEANSVGNLGLGFREFNPANNRLWGVSLWYD 87
            IAG A   D GG  + R  H  G G+      + +  F       + LF D ++ +TN     GNLG G+R F P  +R++G SLWYD
Sbjct:   38 IAGTAVRADDGGGVQARIGHIEGQGIPQVQPVTPIELFPYYEFDQQLLFNDSRFVITNSGGLGGNLGFGYRFFEPETDRVYGGSLWYD 125
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BLAST of mRNA_M-pyrifera_M_contig81550.19083.1 vs. uniprot
Match: A0A518IPT2_9BACT (Uncharacterized protein n=2 Tax=Rosistilla oblonga TaxID=2527990 RepID=A0A518IPT2_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.340e-5
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0 
Query:   12 GGTFRLRHFVGDGVGIQDSSSSLGAFLPLS--ASDEFLFFDGQYSLTNEANSV--GNLGLGFREFNPANNRLWGVSLWYD 87
            G  + L H  G+GVG+ D  + +GAF+PL   +SD   F D    L NE      GNLG G R F+   NR++G   +YD
Sbjct:   41 GARYGLGHVAGEGVGLDDGYTRIGAFVPLMQPSSDVLFFTDTHLLLYNEQTEAKGGNLGGGVRYFDATMNRIFGGYTYYD 120
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81550.19083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A353ZEA6_9PLAN2.810e-636.36Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A518IPT2_9BACT1.340e-540.00Uncharacterized protein n=2 Tax=Rosistilla oblonga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038177Inverse autotransporter, beta-domain superfamilyGENE3D2.40.160.160coord: 12..87
e-value: 3.0E-5
score: 25.7
IPR024519Inverse autotransporter, beta-domainPFAMPF11924IAT_betacoord: 30..87
e-value: 3.8E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81550contigM-pyrifera_M_contig81550:3..263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81550.19083.1mRNA_M-pyrifera_M_contig81550.19083.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81550 3..263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81550.19083.1 ID=prot_M-pyrifera_M_contig81550.19083.1|Name=mRNA_M-pyrifera_M_contig81550.19083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
NIAGIAPITDTGGTFRLRHFVGDGVGIQDSSSSLGAFLPLSASDEFLFFD
GQYSLTNEANSVGNLGLGFREFNPANNRLWGVSLWYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038177IAT_beta_sf
IPR024519IAT_beta