mRNA_M-pyrifera_M_contig81540.19079.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A3C2B2N5_9ACTN (TVP38/TMEM64 family membrane protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B2N5_9ACTN) HSP 1 Score: 68.2 bits (165), Expect = 6.340e-12 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1 Query: 31 RW---AIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGT 264 RW AI A WV V G L R G + E A G+WW AA+++ +RP+V FP +++TI AG++FGP+WGT Sbjct: 5 RWKVAAIVAVWVALVAGWFLSLRGSGTSVGEAAQELVDRARGAWWAFAAYLVVAVVRPLVLFPATLVTIAAGMLFGPWWGT 85
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A7C3NCZ4_9CHLR (TVP38/TMEM64 family membrane protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3NCZ4_9CHLR) HSP 1 Score: 65.1 bits (157), Expect = 1.000e-10 Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 1 Query: 19 RHRTRWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGTA 267 RHR + IA W+I + +P+ A + ++ S +GP F+ + +RP++ FP S+LTILAG +FGPFWG A Sbjct: 9 RHRQKLIIATLWLIILGSYWGYLTYHNESPLITAQSLSQFLQKSIYGPFIFLAIFLIRPLILFPTSILTILAGFLFGPFWGVA 91
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A0M8K572_9CHLR (TVP38/TMEM64 family membrane protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K572_9CHLR) HSP 1 Score: 64.7 bits (156), Expect = 1.560e-10 Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 1 Query: 19 RHRTRWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGT 264 RHR+R W + IA GL P E A + + G AF++ YTLRP++AFP LT L+G +FGPFWGT Sbjct: 17 RHRSRIIAFFFWGAAIFTYWGIAARNGLHPAETAHLLAKWVRETEVGLLAFMVFYTLRPLIAFPAIFLTALSGYLFGPFWGT 98
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A7V5UBI6_9GAMM (TVP38/TMEM64 family membrane protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5UBI6_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 7.080e-10 Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 16 LRHRTRWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEG-SWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGT 264 ++ RW + AA + G+V + L +G E AF I+G W GP FV+ Y L V+ FPGSVLT+ G +FGP WGT Sbjct: 1 MKRAVRWFVGAALIAGIVWMFLN---RGQWDAEQVQAF---IDGLGWAGPVVFVLLYALGTVLFFPGSVLTLAGGALFGPLWGT 78
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: UPI001C3C4C80 (VTT domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C4C80) HSP 1 Score: 61.2 bits (147), Expect = 2.540e-9 Identity = 35/87 (40.23%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 7 EAGLRHRTRWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGTA 267 A RHR AAW + V V A V+ + P E A AI+GS WGP AFV Y +RP++ +VLT+ G +FG G A Sbjct: 2 RASTRHRLL--AGAAWALLVGAVVTWALVEDVGPAEAATRLVDAIQGSAWGPLAFVAVYLVRPLIFLSAAVLTVAGGFLFGAVGGVA 86
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A7K1B6N1_9ACTN (TVP38/TMEM64 family membrane protein n=2 Tax=root TaxID=1 RepID=A0A7K1B6N1_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 4.230e-9 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 1 Query: 31 RWA----IAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGTA 267 RWA AAW+ + + R GL P++ A G+WW +++ LRP+V FP SV+T+ AG++FGP G A Sbjct: 19 RWARLAFAGAAWLSLAIAWIVYQRRSGLGPVDTAQELVDTARGNWWAIIGYLVISLLRPLVLFPASVVTVAAGLLFGPVVGVA 101
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: UPI00034D081E (VTT domain-containing protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034D081E) HSP 1 Score: 59.7 bits (143), Expect = 1.030e-8 Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 1 Query: 31 RWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGTA 267 R + A W+ ++ L+ E+ F + WWG A++ Y LRP+V FP SVLT++ G++FGP+ G A Sbjct: 11 RIGVTALWIAAILLWRNHQTSNDLSTTEVGQRFLDNVGSEWWGVLAYIGVYLLRPLVLFPASVLTVMGGILFGPWLGVA 89
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A7W1TP72_9CHLR (TVP38/TMEM64 family membrane protein n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1TP72_9CHLR) HSP 1 Score: 59.3 bits (142), Expect = 1.560e-8 Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 52 WVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWG 261 W++ + G A K L+P+ + + ++ + +G FV+ YTLRP++ FP +VLT+ AG++FGP WG Sbjct: 33 WLLLLGGYQWYALSKHLSPLAVLQQVITVLKSNMFGGLLFVVLYTLRPLILFPATVLTLGAGLVFGPVWG 102
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A7Y1ZWW2_9ACTN (TVP38/TMEM64 family membrane protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZWW2_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 4.390e-8 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 112 ELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWG 261 + A F + +WWG A+V Y RP+V FP SVLT++ GV+FGP++G Sbjct: 59 DSAQQFIDDVGSAWWGVVAYVAVYLARPIVLFPASVLTVVGGVLFGPYFG 108
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Match: A0A838IZ03_9DEIN (TVP38/TMEM64 family membrane protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A838IZ03_9DEIN) HSP 1 Score: 57.8 bits (138), Expect = 6.170e-8 Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 46 AAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSWWGPAAFVIAYTLRPVVAFPGSVLTILAGVIFGPFWGTA 267 AAW + VV ++ G +P+++ A + ++ G AFVIAY LRP++ F S+LTI AG+++GP G A Sbjct: 21 AAWALAVVAYVVVVTRSGASPLDVLAALLAFLQDHPLGAIAFVIAYMLRPLLLFSASLLTIGAGLLYGPLLGFA 94 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81540.19079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81540.19079.1 >prot_M-pyrifera_M_contig81540.19079.1 ID=prot_M-pyrifera_M_contig81540.19079.1|Name=mRNA_M-pyrifera_M_contig81540.19079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MSEAGLRHRTRWAIAAAWVIGVVGVGLIARVKGLTPIELADAFGSAIEGSback to top mRNA from alignment at M-pyrifera_M_contig81540:661..927+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81540.19079.1 ID=mRNA_M-pyrifera_M_contig81540.19079.1|Name=mRNA_M-pyrifera_M_contig81540.19079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig81540:661..927+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81540:661..927+ >mRNA_M-pyrifera_M_contig81540.19079.1 ID=mRNA_M-pyrifera_M_contig81540.19079.1|Name=mRNA_M-pyrifera_M_contig81540.19079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig81540:661..927+ (Macrocystis pyrifera P11B4 male)back to top |