prot_M-pyrifera_M_contig8154.19076.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8154.19076.1
Unique Name	prot_M-pyrifera_M_contig8154.19076.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	125

Homology

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 5.530e-57
Identity = 97/119 (81.51%), Postives = 106/119 (89.08%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNKVRWRASPALFLSRSLD 123
            P DLDP+TSRH+LHH+RTVYLRLR+LADAGC+FLGHGLDNDFRM NLTLPPSQVIDTVHLWSL GQRK+SLRFLAHYLL +NIQGETHDSIEDARIALALYNK R   +   F S +LD
Sbjct:  926 PGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTF-STTLD 1043

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.660e-57
Identity = 97/119 (81.51%), Postives = 106/119 (89.08%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNKVRWRASPALFLSRSLD 123
            P DLDP+TSRH+LHH+RTVYLRLR+LADAGC+FLGHGLDNDFRM NLTLPPSQVIDTVHLWSL GQRK+SLRFLAHYLL +NIQGETHDSIEDARIALALYNK R   +   F S +LD
Sbjct: 1489 PGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTF-STTLD 1606

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A7S2CVI7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVI7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.840e-43
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    7 DLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK 107
            DLDP TS HHL HLRT YL+LR L D GCVF+GHGL  DFR+ N+ +PP Q+ DTV LW LP QRK+SLRFLA  LL+ +IQGETHDSIEDAR ALALY K
Sbjct:    5 DLDPLTSPHHLVHLRTAYLKLRLLVDRGCVFVGHGLRGDFRVVNIFVPPDQIKDTVELWCLPDQRKLSLRFLAACLLEADIQGETHDSIEDARGALALYKK 105

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A7R9Z7X4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z7X4_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 8.610e-42
Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNKVRWRASPALFLSRSLDVF 125
            P DLDP TSRH+L  L+  YL+LR+LAD GCVF+GHGL  DFR+ NLTLPP Q IDTV L+S   QRK+SLRFLA YLL +NIQG THD+IEDA  AL LY K +   +   F  R  +++
Sbjct:   34 PGDLDPQTSRHYLTTLKHAYLKLRYLADCGCVFIGHGLKKDFRIINLTLPPGQQIDTVELFSYRRQRKLSLRFLASYLLGVNIQGTTHDAIEDALTALQLYRKYQQLVATGQFDERLAEMY 154

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A7S2HCV8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCV8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.370e-41
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    7 DLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK 107
            DLDP TS HHL HLRT YL+LR L D G +F+GHGL  DFR+ N+ +PPSQ+ DTV LW LPGQRK+SLRFLA  LLD +IQGETHDSIEDAR AL LY +
Sbjct:  130 DLDPLTSHHHLVHLRTAYLKLRLLVDKGAIFVGHGLRGDFRVVNMFVPPSQIADTVDLWYLPGQRKISLRFLAACLLDTDIQGETHDSIEDARGALLLYKR 230

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: C1MK81_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MK81_MICPC)

HSP 1 Score: 142 bits (359), Expect = 1.670e-40
Identity = 66/122 (54.10%), Postives = 90/122 (73.77%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK-VRWRASPALFLSRSLDVF 125
            P DLDP+TS HH+  L+  YL+LR+L D GCVF+GHGL  DF+M N+T+PP+Q++DTV L+    QRK+SLRFLA  LLD++IQ  THDSIEDAR+A+ LY K +     P  F ++ L+++
Sbjct:   81 PGDLDPNTSGHHITKLKHAYLKLRYLVDVGCVFVGHGLKQDFKMINITVPPAQIVDTVELFHFKRQRKLSLRFLASVLLDLDIQATTHDSIEDARVAIRLYEKYLDLNEIPGAFQAKLLEIY 202

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A7S2HCK3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCK3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.300e-40
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    7 DLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK 107
            DLDP TS HHL HLRT YL+LR L D G +F+GHGL  DFR+ N+ +PPSQ+ DTV LW LPGQRK+SLRFLA  LLD +IQGETHDSIEDAR AL LY +
Sbjct:  272 DLDPLTSHHHLVHLRTAYLKLRLLVDKGAIFVGHGLRGDFRVVNMFVPPSQIADTVDLWYLPGQRKISLRFLAACLLDTDIQGETHDSIEDARGALLLYKR 372

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: C1FEW4_MICCC (Exonuclease domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEW4_MICCC)

HSP 1 Score: 139 bits (351), Expect = 2.490e-39
Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK 107
            P DLDP+ S+HH+  L+  YL+LR+L DAGCVF+GHGL  DF+M N+T+PP+Q++DTV L+    QRK+SLRFLA YLL  +IQ ETHDSIEDAR A+ LY+K
Sbjct:   94 PGDLDPALSKHHIVELKHAYLKLRYLVDAGCVFVGHGLKQDFKMINVTVPPAQIVDTVELFHFKRQRKLSLRFLASYLLKEDIQQETHDSIEDARTAVRLYHK 196

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: A0A7S0R7R5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R7R5_9CHLO)

HSP 1 Score: 138 bits (347), Expect = 4.970e-38
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 0

Query:    5 PDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNKVRWRASPALFLSRSLDVF 125
            P DL+PSTSRH+L  ++  YL+LR+L DAGCVF+GHGL  DFRM NL +PP QV+DTV L+S    RK+SLRFLA YL   NIQ + HDS+EDAR AL LY   R   +   F  +  +++
Sbjct:  109 PGDLEPSTSRHYLTTMKHAYLKLRYLVDAGCVFVGHGLKKDFRMINLVVPPEQVVDTVELFSFARARKMSLRFLASYLCGANIQAQVHDSVEDARAALKLYEVYRKLVADGTFEDKLSELY 229

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BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 140 bits (353), Expect = 4.980e-38
Identity = 68/102 (66.67%), Postives = 79/102 (77.45%), Query Frame = 0

Query:    6 DDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFNLTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARIALALYNK 107
            +DLDPS SRHHL   RT YL+LR L D G + +GHGL  DFR+ N+ +PP+QVIDTV LW L GQRK+SLRFLA YLL  +IQGETHDSIEDAR A+ LY K
Sbjct:  217 EDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQK 318

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8154.19076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G787_ECTSI	5.530e-57	81.51	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5KX54_9PHAE	6.660e-57	81.51	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S2CVI7_9STRA	7.840e-43	70.30	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7R9Z7X4_9CHLO	8.610e-42	59.50	Hypothetical protein (Fragment) n=1 Tax=Chlamydomo...	[more]
A0A7S2HCV8_9STRA	2.370e-41	69.31	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
C1MK81_MICPC	1.670e-40	54.10	Predicted protein (Fragment) n=1 Tax=Micromonas pu...	[more]
A0A7S2HCK3_9STRA	5.300e-40	69.31	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
C1FEW4_MICCC	2.490e-39	62.14	Exonuclease domain-containing protein (Fragment) n...	[more]
A0A7S0R7R5_9CHLO	4.970e-38	54.55	Hypothetical protein n=1 Tax=Chlamydomonas leiostr...	[more]
K8ZCB7_NANGC	4.980e-38	66.67	PAB-dependent poly(A)-specific ribonuclease subuni...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 4..116 e-value: 5.3E-24 score: 86.6
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 18..105 e-value: 9.2E-10 score: 39.3
None	No IPR available	PANTHER	PTHR15728	UBIQUITIN SPECIFIC PROTEASE 52 / POLY A RIBONUCLEASE SUBUNIT PAN2	coord: 4..107
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 25..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8154	contig	M-pyrifera_M_contig8154:1077..1451 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8154.19076.1	mRNA_M-pyrifera_M_contig8154.19076.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8154 1077..1451 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8154.19076.1 ID=prot_M-pyrifera_M_contig8154.19076.1|Name=mRNA_M-pyrifera_M_contig8154.19076.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MFGKPDDLDPSTSRHHLHHLRTVYLRLRFLADAGCVFLGHGLDNDFRMFN
LTLPPSQVIDTVHLWSLPGQRKVSLRFLAHYLLDMNIQGETHDSIEDARI
ALALYNKVRWRASPALFLSRSLDVF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3
IPR012337	RNaseH-like_sf