mRNA_M-pyrifera_M_contig81500.19070.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81500.19070.1
Unique NamemRNA_M-pyrifera_M_contig81500.19070.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D5B185_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B185_9BACT)

HSP 1 Score: 370 bits (950), Expect = 6.330e-127
Identity = 188/262 (71.76%), Postives = 219/262 (83.59%), Query Frame = 1
Query:   16 SSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            + PAP  D +L+VR LVK+Y+ RRVV+GVSF + AGEIVGLLGPNGAGKTTSFRMTVGL  PD GEVWL  REC RLPMY+RAR GMGYLPQE S+FRRM VRDN+LAVLEA  + + ERE+RA ELL  LDLTH+  ++AETLSGGERRRLEI RALASEP IL+LDEPFAGVDP+AV+EIQ ++ +L+ +GIGVLITDHNVRETL++TDRAY+IH G+IL+EG+ A LI DP VREVYLG  F+ AL  RGVTA EE GL
Sbjct:    9 TGPAPHPDSLLEVRNLVKSYRRRRVVNGVSFYVRAGEIVGLLGPNGAGKTTSFRMTVGLTQPDQGEVWLRNRECSRLPMYKRARLGMGYLPQEASVFRRMSVRDNLLAVLEAQRLSKSEREERAGELLSELDLTHLALNVAETLSGGERRRLEICRALASEPTILLLDEPFAGVDPIAVEEIQDLIQKLRGKGIGVLITDHNVRETLQSTDRAYIIHEGRILKEGTAAELIGDPKVREVYLGKSFEPAL--RGVTAEEERGL 268          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A521L0J3_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521L0J3_9BACT)

HSP 1 Score: 358 bits (918), Expect = 2.760e-122
Identity = 181/256 (70.70%), Postives = 214/256 (83.59%), Query Frame = 1
Query:   34 SDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            S+ +L+V GLVK YK RRVVDGVSF++ AGEIVGLLGPNGAGKTTSFRM VGL+TPDAG+V L G EC  LPMY+RAR GMGYLPQEPSIFRRM VRDN+LAVLEA P+ R +R  RADELL  L+LTH+  +LAETLSGGERRRLEI RALASEP IL+LDEPFAGVDP+AV+EIQG++ +L+  G+G+LITDHNVRETL++TDRAY++H+GQILREG+   LI DP VREVYLG  F+   V   +++AEE  L
Sbjct:    3 SEALLEVSGLVKTYKRRRVVDGVSFRVQAGEIVGLLGPNGAGKTTSFRMAVGLITPDAGKVVLRGVECSNLPMYRRARLGMGYLPQEPSIFRRMAVRDNLLAVLEAQPLSRQQRHARADELLRELELTHLSDALAETLSGGERRRLEICRALASEPSILLLDEPFAGVDPIAVEEIQGLIRRLRERGLGILITDHNVRETLQSTDRAYILHQGQILREGTARELIDDPKVREVYLGKTFE---VGARLSSAEERAL 255          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518EN12_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EN12_9BACT)

HSP 1 Score: 356 bits (914), Expect = 1.380e-121
Identity = 175/254 (68.90%), Postives = 214/254 (84.25%), Query Frame = 1
Query:   40 PILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            P LDVRGLVK+YKGRRVVDGV F +  GEIVGLLGPNGAGKTTSFRMTVG+V PD G V LGG++C +LPM++RAR GMGYLPQE S+FR+M V+DNVLAVLEA+P+ R ER   A+ LL+ L+L H+  S ++TLSGGERRRLE+AR+LA+ P IL+LDEPFAGVDP+ V+EIQG++ QL+ +GIG+LITDHNVRETL++T+RAY+IH+GQILREG+   LI+DP VREVYLG  FD A  +RGV+A EE GL
Sbjct:    7 PPLDVRGLVKSYKGRRVVDGVGFHVEPGEIVGLLGPNGAGKTTSFRMTVGVVVPDEGTVTLGGKDCTKLPMFRRARLGMGYLPQESSVFRQMTVKDNVLAVLEALPLGRRERHSEAERLLKELELFHLAASRSDTLSGGERRRLELARSLATRPSILLLDEPFAGVDPINVEEIQGLIQQLRDQGIGILITDHNVRETLQSTERAYIIHQGQILREGTAEELIADPKVREVYLGRNFDVAPAARGVSAEEERGL 260          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A7C1WY87_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WY87_9BACT)

HSP 1 Score: 356 bits (913), Expect = 2.180e-121
Identity = 177/263 (67.30%), Postives = 216/263 (82.13%), Query Frame = 1
Query:   13 PSSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            PS+P+P +D +L+ RGLVKA++ RRVVDGVSF +  GEIVGLLGPNGAGKTT+FRMTVGL  PDAGEVWL GREC R+PM++RAR GMGYLPQE S+FR+M VRDN+LAVLE   + R ++  RADE+L+ LDL  +  ++AETLSGGERRRLEI RALA+ P I +LDEPFAGVDP+AV+EIQG++  L+  G+GVLITDHNVRETLE+ DRAY+IH+GQILREG+   LI+DP VREVYLG  FD  +  RGV+A E+ GL
Sbjct:    4 PSAPSPHADALLETRGLVKAFRKRRVVDGVSFHVRKGEIVGLLGPNGAGKTTTFRMTVGLTHPDAGEVWLKGRECSRMPMFRRARLGMGYLPQEASVFRKMTVRDNILAVLETTKLTRRQQRIRADEILQELDLVRLATNIAETLSGGERRRLEICRALATHPSIFLLDEPFAGVDPIAVEEIQGLVRGLRDRGLGVLITDHNVRETLESVDRAYIIHQGQILREGTAEELIADPRVREVYLGRSFDRPV--RGVSAEEQRGL 264          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A7Y4SRE3_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SRE3_9BACT)

HSP 1 Score: 354 bits (908), Expect = 6.460e-121
Identity = 179/244 (73.36%), Postives = 207/244 (84.84%), Query Frame = 1
Query:   70 AYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            AY+GRRVV+GVSF +  GEIVGLLGPNGAGKTTSFRMTVGL  PDAGEV L GREC RLPM++RAR GMGYLPQEPSIFRRMKVR N+LAVLEAMP+ R +R  RADELL  LDL H+ G+LA+TLSGGERRRLEIARALA++P IL+LDEPFAGVDP+AV+EIQ ++ +L+   +G+LITDHNVRETL +TDRAY+IH+G+ILREG+ A L+ DP VREVYLG  FD   V RGVTA EE GL
Sbjct:    1 AYRGRRVVNGVSFHVDRGEIVGLLGPNGAGKTTSFRMTVGLTPPDAGEVLLEGRECSRLPMFKRARLGMGYLPQEPSIFRRMKVRHNLLAVLEAMPLARAQRHARADELLAELDLEHLAGNLADTLSGGERRRLEIARALATDPSILLLDEPFAGVDPIAVEEIQTLIGRLRQRNLGILITDHNVRETLHSTDRAYIIHQGRILREGTAAQLVEDPKVREVYLGHSFDTK-VRRGVTAEEERGL 243          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D5W7L9_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W7L9_9BACT)

HSP 1 Score: 338 bits (868), Expect = 9.340e-115
Identity = 168/249 (67.47%), Postives = 201/249 (80.72%), Query Frame = 1
Query:   22 PAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVS 768
            P+  S+ +L+V GLVKA+ GRRVVDGV F +  GEIVGLLGPNGAGKTTSFRMTVGL+ PD G+V L G+EC RLPMY+RAR GMGYLPQEPS+FRRM VR N+LAVLE + + R +R   AD LLE L+L+H+    A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP+ V EIQG++ Q++  GIGVLITDHNVRETLETTDRAY+IH GQILREGS A L+ D  VR VYLG+ FD  + S
Sbjct:    2 PSTGSEHLLEVSGLVKAFDGRRVVDGVGFHVDQGEIVGLLGPNGAGKTTSFRMTVGLLHPDEGQVHLNGQECSRLPMYRRARVGMGYLPQEPSVFRRMTVRGNILAVLETLKLTRADRRREADRLLEELELSHLGKHRADTLSGGERRRLELSRALATRPSLLLLDEPFAGVDPINVQEIQGLISQMRQRGIGVLITDHNVRETLETTDRAYIIHAGQILREGSAAELVDDREVRRVYLGENFDRTVSS 250          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518BFH1_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BFH1_9BACT)

HSP 1 Score: 338 bits (866), Expect = 4.780e-114
Identity = 167/254 (65.75%), Postives = 207/254 (81.50%), Query Frame = 1
Query:   43 ILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGLR 804
            +L+VRGL K+Y+GR+VVDGVSF +  GEIVGLLGPNGAGKTTSFRMTVGLV PD GEV+L GREC R PM++RAR GMGYLPQE S+FRR+ VRDN+LAVLE +P+ R +R  RADELL+ +DL  + GS+A+TLSGGERRRLEI RALA+ P +L+LDEPFAGVDP+AV+EIQGI+ QL+  GIGVLITDHNVRETL  TDRAY+IH+G ILREG+   L++D  V++VYLG  F+  ++  G +   ++  R
Sbjct:   26 LLEVRGLEKSYRGRKVVDGVSFDVGPGEIVGLLGPNGAGKTTSFRMTVGLVRPDGGEVFLRGRECSRWPMFKRARLGMGYLPQEASVFRRLGVRDNLLAVLETLPLSRRDRRRRADELLQEMDLERLAGSMADTLSGGERRRLEICRALATNPALLLLDEPFAGVDPIAVEEIQGIVRQLRERGIGVLITDHNVRETLSCTDRAYIIHQGAILREGTADELVADERVKQVYLGHSFEVGVLG-GASGGRDQAPR 278          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2D6HJP6_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJP6_9BACT)

HSP 1 Score: 337 bits (863), Expect = 9.040e-114
Identity = 168/253 (66.40%), Postives = 205/253 (81.03%), Query Frame = 1
Query:   43 ILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVSRGVTAAEEEGL 801
            +L+V GLVKAY+GRRVVDGVSF++   EIVGLLGPNGAGK+TSFRMTVGL  PDAG V L G +C RLPM++RAR GMGYLPQEPS+FRRM VRDN+LAVLE +P+ R +R   ADEL+  L+L+H+  + A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP+ V EIQGI+  L+   IG+LITDHNVRETL++TDRAY+IH G+ILREGS   L++DP VREVYLG+ FD  L    V+ AEE  L
Sbjct:   13 LLEVEGLVKAYRGRRVVDGVSFRVGRHEIVGLLGPNGAGKSTSFRMTVGLTRPDAGAVRLMGVDCSRLPMFRRARLGMGYLPQEPSVFRRMSVRDNLLAVLETLPLSRAQRRKEADELMADLELSHLADNEAQTLSGGERRRLELSRALATRPSVLLLDEPFAGVDPINVQEIQGIVRDLRERDIGILITDHNVRETLQSTDRAYIIHEGRILREGSGVELVNDPRVREVYLGEHFDRPLEE--VSQAEEREL 263          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A518D3W2_9BACT (Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D3W2_9BACT)

HSP 1 Score: 334 bits (857), Expect = 1.190e-112
Identity = 170/252 (67.46%), Postives = 206/252 (81.75%), Query Frame = 1
Query:   10 APSSPAPAS----DPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFD 753
            APS+ A AS    D +L+ RGLVK+Y+GRRVVDGVSF +  GEIVGLLGPNGAGKTTSFRM VGLV PD G+V+L G EC R+PM++RAR GMGYLPQE SIFRR+ VRDN+LAVLE +P+ R +R +RAD++L  +DL  +  SLA+TLSGGERRRLEI+RALA +P IL+LDEPFAGVDP+AV+EIQ ++  L+  GIGVLITDHNVRETL +TDRAY+IH+G ILREG+   L+ DP VREVYLG  F+
Sbjct:   28 APSARAVASGAGSDLLLEARGLVKSYRGRRVVDGVSFNVRPGEIVGLLGPNGAGKTTSFRMVVGLVRPDEGQVFLRGNECARMPMFRRARLGMGYLPQESSIFRRLGVRDNILAVLETLPLSRKQRHERADQILTEMDLLRLSKSLADTLSGGERRRLEISRALALDPAILLLDEPFAGVDPIAVEEIQRLVEGLRERGIGVLITDHNVRETLHSTDRAYIIHQGTILREGTADQLVKDPKVREVYLGHAFE 279          
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Match: A0A2E5X6M5_9BACT (LPS export ABC transporter ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X6M5_9BACT)

HSP 1 Score: 333 bits (854), Expect = 1.260e-112
Identity = 164/249 (65.86%), Postives = 197/249 (79.12%), Query Frame = 1
Query:   22 PAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPNGAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPSIFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLSGGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIGVLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRFDEALVS 768
            P+   + +L+V GLVKA+ GRRVVDGV F +  GEIVGLLGPNGAGKTTSFRMTVGL+ PD G V L G EC RLPMY+RAR GMGYLPQEPS+FRRM V  N+LAVLE + +KR ER   A  LLE L+L+H+    A+TLSGGERRRLE++RALA+ P +L+LDEPFAGVDP++V EIQG++ Q++  GIGVLITDHNVRETL+TTDRAY+IH G ILREGS   L+ DP VR VYLG+ FD  + +
Sbjct:    2 PSHTPEHLLEVNGLVKAFDGRRVVDGVGFHVDRGEIVGLLGPNGAGKTTSFRMTVGLLHPDEGHVHLHGEECSRLPMYRRARLGMGYLPQEPSVFRRMTVLGNILAVLETLKLKRSERHAEAARLLEELELSHLADHRADTLSGGERRRLELSRALATRPSLLLLDEPFAGVDPISVQEIQGLIGQMRERGIGVLITDHNVRETLQTTDRAYIIHAGHILREGSATELVDDPEVRRVYLGENFDRTVAN 250          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81500.19070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5B185_9BACT6.330e-12771.76LPS export ABC transporter ATP-binding protein n=1... [more]
A0A521L0J3_9BACT2.760e-12270.70LPS export ABC transporter ATP-binding protein n=1... [more]
A0A518EN12_9BACT1.380e-12168.90Lipopolysaccharide export system ATP-binding prote... [more]
A0A7C1WY87_9BACT2.180e-12167.30Lipopolysaccharide export system ATP-binding prote... [more]
A0A7Y4SRE3_9BACT6.460e-12173.36Lipopolysaccharide export system ATP-binding prote... [more]
A0A2D5W7L9_9BACT9.340e-11567.47LPS export ABC transporter ATP-binding protein n=1... [more]
A0A518BFH1_9BACT4.780e-11465.75Lipopolysaccharide export system ATP-binding prote... [more]
A0A2D6HJP6_9BACT9.040e-11466.40LPS export ABC transporter ATP-binding protein n=1... [more]
A0A518D3W2_9BACT1.190e-11267.46Lipopolysaccharide export system ATP-binding prote... [more]
A0A2E5X6M5_9BACT1.260e-11265.86LPS export ABC transporter ATP-binding protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81500contigM-pyrifera_M_contig81500:107..913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score283.1
Seed ortholog evalue1.4e-73
Seed eggNOG ortholog637390.AFOH01000106_gene71
Preferred namelptB
KEGG koko:K01990,ko:K06861
KEGG TC1.B.42.1,3.A.1
KEGG Pathwayko02010,map02010
KEGG ModuleM00254,M00320
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351
EggNOG free text desc.ABC transporter
EggNOG OGs1MU8M@1224,1RPW1@1236,2NCI1@225057,COG1137@1,COG1137@2
COG Functional cat.P
Best tax levelAcidithiobacillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Exons1
Model size807
Cds size807
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.7416904-CDS-M-pyrifera_M_contig81500:106..9131622816721.7416904-CDS-M-pyrifera_M_contig81500:106..913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81500 107..913 -
1692278140.1243892-CDS-M-pyrifera_M_contig81500:106..9131692278140.1243892-CDS-M-pyrifera_M_contig81500:106..913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81500 107..913 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81500.19070.1prot_M-pyrifera_M_contig81500.19070.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81500 107..913 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81500.19070.1

>prot_M-pyrifera_M_contig81500.19070.1 ID=prot_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
MSDAPSSPAPASDPILDVRGLVKAYKGRRVVDGVSFQISAGEIVGLLGPN
GAGKTTSFRMTVGLVTPDAGEVWLGGRECGRLPMYQRARNGMGYLPQEPS
IFRRMKVRDNVLAVLEAMPMKRGEREDRADELLESLDLTHIVGSLAETLS
GGERRRLEIARALASEPKILMLDEPFAGVDPLAVDEIQGILHQLKAEGIG
VLITDHNVRETLETTDRAYVIHRGQILREGSPAALISDPVVREVYLGDRF
DEALVSRGVTAAEEEGLR*
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mRNA from alignment at M-pyrifera_M_contig81500:107..913-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81500.19070.1 ID=mRNA_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig81500:107..913- (Macrocystis pyrifera P11B4 male)
ATGAGCGATGCCCCGAGCTCCCCCGCGCCCGCTTCCGACCCGATCCTCGA CGTTCGCGGTCTCGTCAAGGCCTACAAGGGCCGCCGCGTCGTCGATGGCG TCTCCTTTCAGATCAGCGCGGGCGAGATCGTCGGGCTCCTCGGCCCCAAC GGCGCAGGCAAGACCACGTCGTTCCGCATGACCGTCGGCCTGGTCACGCC CGACGCCGGTGAAGTCTGGCTCGGCGGGCGCGAGTGCGGGCGCCTGCCCA TGTACCAGCGGGCGCGCAACGGGATGGGATACCTCCCTCAAGAGCCCAGC ATCTTCCGACGAATGAAGGTGCGCGACAACGTGCTCGCCGTGCTCGAGGC GATGCCGATGAAGCGCGGCGAGCGCGAGGACCGCGCCGACGAGCTGCTCG AATCCCTCGACCTGACGCACATCGTCGGCAGCCTCGCCGAGACCCTCTCC GGCGGCGAGCGGCGCCGGCTGGAGATCGCGCGGGCGCTCGCGTCGGAGCC CAAGATCCTGATGCTGGACGAGCCGTTCGCCGGCGTCGACCCCCTGGCCG TCGACGAGATCCAGGGCATCCTGCACCAGCTCAAGGCCGAAGGCATCGGG GTGCTGATCACCGACCACAACGTCCGCGAGACCCTCGAGACCACGGACCG CGCCTACGTGATCCACCGCGGCCAGATCCTGCGCGAAGGCTCGCCCGCCG CGCTGATCAGCGATCCGGTCGTGCGCGAGGTGTACCTGGGCGACCGCTTC GACGAAGCGCTGGTCTCCCGCGGCGTGACCGCCGCCGAGGAAGAAGGCCT GCGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81500:107..913-

>mRNA_M-pyrifera_M_contig81500.19070.1 ID=mRNA_M-pyrifera_M_contig81500.19070.1|Name=mRNA_M-pyrifera_M_contig81500.19070.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig81500:107..913- (Macrocystis pyrifera P11B4 male)
ATGAGCGATGCCCCGAGCTCCCCCGCGCCCGCTTCCGACCCGATCCTCGA
CGTTCGCGGTCTCGTCAAGGCCTACAAGGGCCGCCGCGTCGTCGATGGCG
TCTCCTTTCAGATCAGCGCGGGCGAGATCGTCGGGCTCCTCGGCCCCAAC
GGCGCAGGCAAGACCACGTCGTTCCGCATGACCGTCGGCCTGGTCACGCC
CGACGCCGGTGAAGTCTGGCTCGGCGGGCGCGAGTGCGGGCGCCTGCCCA
TGTACCAGCGGGCGCGCAACGGGATGGGATACCTCCCTCAAGAGCCCAGC
ATCTTCCGACGAATGAAGGTGCGCGACAACGTGCTCGCCGTGCTCGAGGC
GATGCCGATGAAGCGCGGCGAGCGCGAGGACCGCGCCGACGAGCTGCTCG
AATCCCTCGACCTGACGCACATCGTCGGCAGCCTCGCCGAGACCCTCTCC
GGCGGCGAGCGGCGCCGGCTGGAGATCGCGCGGGCGCTCGCGTCGGAGCC
CAAGATCCTGATGCTGGACGAGCCGTTCGCCGGCGTCGACCCCCTGGCCG
TCGACGAGATCCAGGGCATCCTGCACCAGCTCAAGGCCGAAGGCATCGGG
GTGCTGATCACCGACCACAACGTCCGCGAGACCCTCGAGACCACGGACCG
CGCCTACGTGATCCACCGCGGCCAGATCCTGCGCGAAGGCTCGCCCGCCG
CGCTGATCAGCGATCCGGTCGTGCGCGAGGTGTACCTGGGCGACCGCTTC
GACGAAGCGCTGGTCTCCCGCGGCGTGACCGCCGCCGAGGAAGAAGGCCT
GCGCTGAATGAGCGATGCCCCGAGCTCCCCCGCGCCCGCTTCCGACCCGA
TCCTCGACGTTCGCGGTCTCGTCAAGGCCTACAAGGGCCGCCGCGTCGTC
GATGGCGTCTCCTTTCAGATCAGCGCGGGCGAGATCGTCGGGCTCCTCGG
CCCCAACGGCGCAGGCAAGACCACGTCGTTCCGCATGACCGTCGGCCTGG
TCACGCCCGACGCCGGTGAAGTCTGGCTCGGCGGGCGCGAGTGCGGGCGC
CTGCCCATGTACCAGCGGGCGCGCAACGGGATGGGATACCTCCCTCAAGA
GCCCAGCATCTTCCGACGAATGAAGGTGCGCGACAACGTGCTCGCCGTGC
TCGAGGCGATGCCGATGAAGCGCGGCGAGCGCGAGGACCGCGCCGACGAG
CTGCTCGAATCCCTCGACCTGACGCACATCGTCGGCAGCCTCGCCGAGAC
CCTCTCCGGCGGCGAGCGGCGCCGGCTGGAGATCGCGCGGGCGCTCGCGT
CGGAGCCCAAGATCCTGATGCTGGACGAGCCGTTCGCCGGCGTCGACCCC
CTGGCCGTCGACGAGATCCAGGGCATCCTGCACCAGCTCAAGGCCGAAGG
CATCGGGGTGCTGATCACCGACCACAACGTCCGCGAGACCCTCGAGACCA
CGGACCGCGCCTACGTGATCCACCGCGGCCAGATCCTGCGCGAAGGCTCG
CCCGCCGCGCTGATCAGCGATCCGGTCGTGCGCGAGGTGTACCTGGGCGA
CCGCTTCGACGAAGCGCTGGTCTCCCGCGGCGTGACCGCCGCCGAGGAAG
AAGGCCTGCGCTGA
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