prot_M-pyrifera_M_contig81432.19043.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81432.19043.1
Unique Nameprot_M-pyrifera_M_contig81432.19043.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length307
Homology
BLAST of mRNA_M-pyrifera_M_contig81432.19043.1 vs. uniprot
Match: A0A451APB8_9GAMM (CHAT domain-containing protein n=1 Tax=Candidatus Kentron sp. TUN TaxID=2126343 RepID=A0A451APB8_9GAMM)

HSP 1 Score: 62.8 bits (151), Expect = 3.250e-7
Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 0
Query:    3 LPVYHEVYASLVRQLWQADG-ETVCRRLASFGLWDRLPDLIDPSRDAYAVNQLARPRIDPPADKEARSYAKQLLPVLSEAWPFDNCPPL----CDVQLCQLASLTDDSETFVRRGESALAYLNANNQYREGYRLAKLAFERV 139
            LPV   V A        ADG E    RL + GLWD  PD + P   A A+N +A+  +  P +   R +A + + VL++AW   +  P      +++L +LA L + S       + A+++L  N +YR+     + A E++
Sbjct:  712 LPVPEAVMAKAAEL---ADGFEPGAHRLVALGLWDVWPDPVTPQARALALNPMAQSLVPTPDEARLRQWAARCIGVLADAWGVSSAQPSHSPQANLELTRLALLAEHSPVIEACADHAISWLYKNLRYRKAAAWGRAAVEQL 850          
BLAST of mRNA_M-pyrifera_M_contig81432.19043.1 vs. uniprot
Match: A0A1X7G9Z4_9PROT (Tetratricopeptide repeat-containing protein n=1 Tax=Azospirillum oryzae TaxID=286727 RepID=A0A1X7G9Z4_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 4.330e-7
Identity = 61/243 (25.10%), Postives = 106/243 (43.62%), Query Frame = 0
Query:    2 QLPVYHEVYASLVRQLWQADGETVCRRLASFGLWDRLPDLIDPSRDAYAVNQLARPRI---DPPADKEARSYAKQLLPVLSEAWPFDNC---PPLCDVQLCQLASLTDDSETFVRRGESALAYLNANNQYREGYRLAKLAFERVADPSPNTSRLIAGHISANAQSHDEIQQCHQLYSRTIAGLPEPTDARSAIELGALLRDRANLSRRLGDIDTALEDLQASLHHSEEHDLTRERAITLGEIA 238
            +LP+     ++L R +  +D  T   RL S  ++D   D+++  R A A   L  PRI      ++ +A  +A+ LLP L   W  D+    P   DV L +LA   +D+         A+ +L   ++YR    L + A   +     +    +    +  A    +++   +   + +  L    DA    ++G++  + A L  + G  D ALE    +L   +E    R RA+TLG+IA
Sbjct:  673 ELPLPLPALSALARHIGMSD--TALDRLLSLSVFDLFSDVVEQDRPAAAPCHLLAPRIAALGALSEADASDFARALLPALFVEWGEDDHRKRPYEADVMLTELAVRAEDAMVLRVTALDAVYHLLRTHRYRRAVELGRRAVAMIESSGFSPPLQLLRRTAQAAALTGDVRFARKCLGQAVDMLAAAPDA-DPKDVGSIRTEYARLLVQDGKPDQALEIFTDTLKLYQELGDVRSRAVTLGDIA 912          
BLAST of mRNA_M-pyrifera_M_contig81432.19043.1 vs. uniprot
Match: A0A0M9EBM8_9DELT (Tetratricopeptide TPR_2 (Fragment) n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9EBM8_9DELT)

HSP 1 Score: 56.2 bits (134), Expect = 1.070e-5
Identity = 51/202 (25.25%), Postives = 90/202 (44.55%), Query Frame = 0
Query:   50 AVNQLARPRIDPPADKEARSYAKQLLPVLSEAWPFDNC---PPLCDVQLCQLASLTDDSETFVRRGESALAYLNANNQYREGYRLAKLAFERVADPSPNTSRLIAGHISANAQSHDEIQQCHQLYSRTIAGLPEPTDARSAIEL----GALLRDRANLSRRLGDIDTALEDLQASLHHSEEHDLTRERAITLGEIARIKVDR 244
            A+N L RP+    ++KE    A+Q++  L E     +      + D +L +LA L  +++  +   + AL  L    +Y E    A+     + +   N    +            +++   Q   R I    +  +  +  +L      L R +ANL ++ G ++ AL+ LQ +    ++    R RA+TLG+IARIKVDR
Sbjct:    6 AINALVRPKAGKLSEKEEIHIAQQIIADLFERMGGVDSRLRTYVADYELARLALLAKNTDVLLATAQDALLGLEDQFKYIEASEFARQTIMLLDNAKVNVPNSLLRIACERCHRTGDVKNARQYIGRAIKNYQKAKEKNAHFDLKNYSNTLFR-QANLFKQEGKLNEALKLLQEAQKILKKLGDQRSRAVTLGDIARIKVDR 206          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81432.19043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A451APB8_9GAMM3.250e-729.58CHAT domain-containing protein n=1 Tax=Candidatus ... [more]
A0A1X7G9Z4_9PROT4.330e-725.10Tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A0M9EBM8_9DELT1.070e-525.25Tetratricopeptide TPR_2 (Fragment) n=1 Tax=Candida... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 271..304
e-value: 64.0
score: 7.9
coord: 191..224
e-value: 4.8
score: 16.2
coord: 231..264
e-value: 100.0
score: 6.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 230..302
e-value: 6.0E-8
score: 32.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 159..306
e-value: 4.1E-16
score: 61.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 181..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81432contigM-pyrifera_M_contig81432:10..930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81432.19043.1mRNA_M-pyrifera_M_contig81432.19043.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81432 10..930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81432.19043.1 ID=prot_M-pyrifera_M_contig81432.19043.1|Name=mRNA_M-pyrifera_M_contig81432.19043.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=307bp
LQLPVYHEVYASLVRQLWQADGETVCRRLASFGLWDRLPDLIDPSRDAYA
VNQLARPRIDPPADKEARSYAKQLLPVLSEAWPFDNCPPLCDVQLCQLAS
LTDDSETFVRRGESALAYLNANNQYREGYRLAKLAFERVADPSPNTSRLI
AGHISANAQSHDEIQQCHQLYSRTIAGLPEPTDARSAIELGALLRDRANL
SRRLGDIDTALEDLQASLHHSEEHDLTRERAITLGEIARIKVDRGDIDAA
LELHQEELSVYESLEDLRSRAVTLGDIARIKVSRGEVKAALELHQERLRV
HESFGDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf