mRNA_M-pyrifera_M_contig81388.19039.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI0004F0CCD1 (60S ribosomal protein L13a n=1 Tax=Acanthisitta chloris TaxID=57068 RepID=UPI0004F0CCD1) HSP 1 Score: 176 bits (446), Expect = 5.460e-54 Identity = 87/134 (64.93%), Postives = 105/134 (78.36%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKI 408 YRNKLKF +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD KRMVVP AL++++LKP RKF VLGRLAH++GW +RD+ LEE+RK A RY + R ++QKI Sbjct: 18 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKLRYNKKRKMMVKLQKI 151
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: RL13A_CYAPA (60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=RL13A_CYAPA) HSP 1 Score: 176 bits (446), Expect = 1.790e-53 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 1 Query: 1 AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYA 372 +++RNKLKF +L+KR NT P +GPFH R+PARI + T+RGMIPHKT RG AAL RLK FEG+P PYD KRMV+P+ALRVL+LKP RKFCVLGRLA ++GW H DLV RLEE+RK +AA YA Sbjct: 45 SLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFYA 168
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A7S1GMD6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMD6_CYCTE) HSP 1 Score: 172 bits (435), Expect = 1.280e-52 Identity = 83/117 (70.94%), Postives = 100/117 (85.47%), Query Frame = 1 Query: 1 AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKV 351 ++YRNK+KF E+LRKRTNT P +GPFH R+P+RIF+ TVRGMIPHKTARG AAL RLK FEGIP P+D KRMVVP+ALRVL+L+ R +C LG LAH++GW HRDLVARLE++RKV Sbjct: 3 SLYRNKVKFGEFLRKRTNTNPVRGPFHFRSPSRIFWRTVRGMIPHKTARGAAALLRLKTFEGIPPPFDKMKRMVVPKALRVLQLRADRAYCKLGDLAHNVGWKHRDLVARLEDQRKV 119
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA) HSP 1 Score: 172 bits (437), Expect = 6.180e-52 Identity = 87/145 (60.00%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 4 VYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY----AETRAKETEIQKIKAELSA 426 + RN ++ ++LRKRTNT P +GPFH RAP+RI + T+RGM+PHKT RG AL RL FEGIPAPYDT KR+VVP+AL++L+LKP R+FC L RLAH++GW HRDLVARLE +RK+ A A Y A T AK +K +ELSA Sbjct: 48 LVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSA 192
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: B5G289_TAEGU (60S ribosomal protein L13a n=18 Tax=Neognathae TaxID=8825 RepID=B5G289_TAEGU) HSP 1 Score: 172 bits (436), Expect = 6.460e-52 Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 369 YRNKLKF +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD KRMVVP AL++++LKP RKF VLGRLAH++GW +RD+ LEE+RK A RY Sbjct: 48 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKIRY 168
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI000A2A5613 (60S ribosomal protein L13a n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5613) HSP 1 Score: 172 bits (437), Expect = 7.190e-52 Identity = 82/135 (60.74%), Postives = 107/135 (79.26%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 411 YRNKLK+ ++LRKRTNT P GPFH RAP+RIF+ TVRGMIPHKT RG A+ RLKVF+G+P PYD KRMVVP ALRV++LKP RKFCVLGRL+H++GW ++D+++ LEE+RK +A + + ++QK+K Sbjct: 65 YRNKLKYLDFLRKRTNTKPSHGPFHFRAPSRIFWRTVRGMIPHKTKRGTEAMNRLKVFDGVPHPYDKEKRMVVPSALRVIRLKPGRKFCVLGRLSHEVGWKYQDIISTLEEKRKAKSAVYFXHKK----KLQKLK 195
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A3N4LV76_9PEZI (60S ribosomal protein L16 n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LV76_9PEZI) HSP 1 Score: 171 bits (434), Expect = 1.190e-51 Identity = 83/135 (61.48%), Postives = 107/135 (79.26%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 411 +R+KLK+ YLRK T +GPFH RAP+RIF+ VRGMI HKT RGQAAL RLKVFEG+P PYDTTKRMVVP+ALRVL+LKP RK+C +GRL+H++GW ++D+V +LEE+RKV +AA YA +A ++ + K Sbjct: 49 FRSKLKYHAYLRKATRFNKTRGPFHFRAPSRIFYKAVRGMIAHKTPRGQAALERLKVFEGVPPPYDTTKRMVVPQALRVLRLKPGRKYCTVGRLSHEVGWKYQDVVVKLEEKRKVKSAAYYARKKAIAKQLDEAK 183
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI001F037591 (60S ribosomal protein L13a-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F037591) HSP 1 Score: 170 bits (431), Expect = 3.380e-51 Identity = 78/121 (64.46%), Postives = 99/121 (81.82%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 369 YRNKLK+ ++LRKR NT P +GPFH RAP++IF+ TVRGMIPHKT RG AL R+KVFEG+P PYD KRMVVP ALRV++LKP R++CVLGRL+H++GW ++D+V LEE+RK +A Y Sbjct: 48 YRNKLKYLDFLRKRMNTKPSRGPFHFRAPSKIFWRTVRGMIPHKTKRGMEALNRMKVFEGVPPPYDKMKRMVVPSALRVIRLKPGRRYCVLGRLSHEVGWKYQDVVKTLEEKRKAKSAVYY 168
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A3M7NAU6_9EURO (Uncharacterized protein (Fragment) n=2 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NAU6_9EURO) HSP 1 Score: 170 bits (431), Expect = 3.590e-51 Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKG-PFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 411 +R KLK+ YLRK T P +G PFH RAPARIF+ TVRGM+PHKTARG AA+ RLKVFEG+P PYDT KR+VVP+ALRVL+LKP RKFC +GRL+H++GW ++D+VARLEE RKV +AA Y +A ++ K Sbjct: 49 FRAKLKYHAYLRKITRYNPTRGGPFHFRAPARIFYKTVRGMVPHKTARGAAAMERLKVFEGVPPPYDTKKRVVVPQALRVLRLKPGRKFCTVGRLSHEVGWKYQDVVARLEERRKVKSAAYYERKKAARKQLADAK 184
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI000FFD96B1 (60S ribosomal protein L13a n=1 Tax=Empidonax traillii TaxID=164674 RepID=UPI000FFD96B1) HSP 1 Score: 170 bits (430), Expect = 3.750e-51 Identity = 82/121 (67.77%), Postives = 98/121 (80.99%), Query Frame = 1 Query: 7 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 369 YRNKLKF +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD KRMVVP AL++++LKP RKF VLGRLAH++GW +R++ LEE+RK A RY Sbjct: 65 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYREVTEVLEEKRKEKAKLRY 185 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81388.19039.1 >prot_M-pyrifera_M_contig81388.19039.1 ID=prot_M-pyrifera_M_contig81388.19039.1|Name=mRNA_M-pyrifera_M_contig81388.19039.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGback to top mRNA from alignment at M-pyrifera_M_contig81388:382..810+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81388.19039.1 ID=mRNA_M-pyrifera_M_contig81388.19039.1|Name=mRNA_M-pyrifera_M_contig81388.19039.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig81388:382..810+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81388:382..810+ >mRNA_M-pyrifera_M_contig81388.19039.1 ID=mRNA_M-pyrifera_M_contig81388.19039.1|Name=mRNA_M-pyrifera_M_contig81388.19039.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig81388:382..810+ (Macrocystis pyrifera P11B4 male)back to top |