prot_M-pyrifera_M_contig81370.19031.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81370.19031.1
Unique Nameprot_M-pyrifera_M_contig81370.19031.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length136
Homology
BLAST of mRNA_M-pyrifera_M_contig81370.19031.1 vs. uniprot
Match: A0A5A8DPB5_CAFRO (IU_nuc_hydro domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DPB5_CAFRO)

HSP 1 Score: 80.1 bits (196), Expect = 8.280e-15
Identity = 44/134 (32.84%), Postives = 77/134 (57.46%), Query Frame = 0
Query:    8 GAFAGQFGDAYIENTDLEGVMNIFPSVRLFGEVLERVAGEVDATA-ELDPEVVREIARVVTQAGTSMHSFSPPAVKIARLHEQLSSLPVDGMALIPLGW----NGHAIAGVFHRTGSDEFAVTVVNTGQGLQHH 136
            GA+ G+FGD ++E+T+LEG  ++ PS+++  +++  +A   +A    +DP  +R+ A  + + GT   S      ++  LH +L +L   G  ++P GW     GHAI   +HR    +F   V+N+G+GL+HH
Sbjct:  533 GAYVGEFGDPFVEDTELEGNRSV-PSLKVMVKLVTALAAMAEAHGWRMDPARLRDAAACMDE-GTVAGSGDTVRDQVIDLHSRLVNLKAGGCLMLPSGWLGTGGGHAIMSQWHRREDGDFDFVVINSGEGLEHH 664          
BLAST of mRNA_M-pyrifera_M_contig81370.19031.1 vs. uniprot
Match: A0A0L0D4G4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4G4_THETB)

HSP 1 Score: 64.3 bits (155), Expect = 2.710e-9
Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 0
Query:    6 RTGAFAGQFGDAYIENTDLEGVMNIFPSVRLFGEVLERVAGEVDATAE-LDPEVVREIARVVT-----QAGTSMHSFSPPAVKIARLH----------EQLSSLPVDGMALIPLGW----NGHAIAGVFHRTGSDEFAVTVVNTGQGLQHH 136
            R GAFAG+FGD YI++T+LEG +   PS+R   EV+        +  E L P +    AR+        +   +       V+   L            ++ ++PV G+ ++  GW    +GHA+  V  R   D +A    NTG+G+Q+H
Sbjct:    6 RNGAFAGEFGDPYIKDTNLEGGLTA-PSIRKLNEVVSSALTSHPSLLETLVPGLAAPAARIQALMEELASAAEIDELKAEMVESKSLEGMDAFLELFMAKIRAIPVGGILVMGGGWMGKASGHALLYVLEREADDAYAFVACNTGEGIQYH 155          
BLAST of mRNA_M-pyrifera_M_contig81370.19031.1 vs. uniprot
Match: A0A5A8CT96_CAFRO (Uncharacterized protein n=9 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CT96_CAFRO)

HSP 1 Score: 52.0 bits (123), Expect = 5.340e-5
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 0
Query:   80 AVKIARLHEQLSSLPVDGMALIPLGW----NGHAIAGVFHRTGSDEFAVTVVNTGQGLQHH 136
            A  +A + E++ S  V G+   P GW     GHAI  +  RT  ++FAVTV NTGQGL HH
Sbjct:  122 AALLADICERVRSTKVGGIFGFPSGWADKKGGHAIFLLVERTSEEDFAVTVCNTGQGLNHH 182          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81370.19031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5A8DPB5_CAFRO8.280e-1532.84IU_nuc_hydro domain-containing protein n=4 Tax=Sar... [more]
A0A0L0D4G4_THETB2.710e-929.80Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A5A8CT96_CAFRO5.340e-545.90Uncharacterized protein n=9 Tax=Cafeteria roenberg... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81370contigM-pyrifera_M_contig81370:32..439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81370.19031.1mRNA_M-pyrifera_M_contig81370.19031.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81370 32..439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81370.19031.1 ID=prot_M-pyrifera_M_contig81370.19031.1|Name=mRNA_M-pyrifera_M_contig81370.19031.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
KVPLVRTGAFAGQFGDAYIENTDLEGVMNIFPSVRLFGEVLERVAGEVDA
TAELDPEVVREIARVVTQAGTSMHSFSPPAVKIARLHEQLSSLPVDGMAL
IPLGWNGHAIAGVFHRTGSDEFAVTVVNTGQGLQHH
back to top