prot_M-pyrifera_M_contig81317.19021.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81317.19021.1
Unique Nameprot_M-pyrifera_M_contig81317.19021.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
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BLAST of mRNA_M-pyrifera_M_contig81317.19021.1 vs. uniprot
Match: A0A3M1DBJ2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3M1DBJ2_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 3.660e-5
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:   22 ERTISVAVPAGTYSVTAASYDGYDNRETT--GVQEYEQYVLQFLDAGGNVLDTTTPTADLPEG 82
            + T  V +PAG Y+++  SYDGY+ RE T    Q  EQ+ +  +D+ G  + T  PT DL +G
Sbjct:   92 QETQPVTLPAGRYTISYYSYDGYEGREKTDPNTQNKEQWNMLLIDSSGKTITTFGPTPDLKDG 154
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81317.19021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3M1DBJ2_9BACT3.660e-539.68Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81317contigM-pyrifera_M_contig81317:3..362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81317.19021.1mRNA_M-pyrifera_M_contig81317.19021.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81317 3..362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81317.19021.1 ID=prot_M-pyrifera_M_contig81317.19021.1|Name=mRNA_M-pyrifera_M_contig81317.19021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
PNTGYGNAWQASVYANPDRVNERTISVAVPAGTYSVTAASYDGYDNRETT
GVQEYEQYVLQFLDAGGNVLDTTTPTADLPEGNTASWLGSVGQVTLAADA
VAVRALHLYAGQAIGPHSVQ
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