prot_M-pyrifera_M_contig81244.18999.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81244.18999.1
Unique Nameprot_M-pyrifera_M_contig81244.18999.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length288
Homology
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A085MVT7_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MVT7_9BILA)

HSP 1 Score: 162 bits (409), Expect = 3.200e-41
Identity = 104/277 (37.55%), Postives = 155/277 (55.96%), Query Frame = 0
Query:   12 LWHRRWAHCDKTMLGRL--PDAVVGMAIKGKD-PSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGY-AKLLR--GKLSSV-RLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPV-ETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQRTPFELYFGSKPDVSRARVWGCLAYAHVSGDKA-KLQDRAIEVIFLGFADNSTGYLVQDPNVSNV 277
            LWHRR+ H D   + +L      VG+ I   D   P+C  C KGKM A P P   + R   P   +  DLCGP  VE+ SGH++F+ + D  SR+     LK+KD+   + + Y AK+    G+   + R DNG E  + ++  + + +GI  + T+P TPQQN V E   R++   VR ML+DA LP  +W  AV T+ + +NR     + +TPFE ++G KPDVS  RV+G  AY+ V  ++  KL ++AIE + +G+ +   GY + DP  + V
Sbjct:  242 LWHRRFGHRDFDAIQKLWKRKMAVGLRINEHDCGKPICETCFKGKMTAFPFPK-GETRANKPMELIHSDLCGPMPVETPSGHRYFLTLIDDHSRFTVVHLLKSKDEVFDAIKNYIAKMCNRFGRKPMIFRSDNGREYVTKSLETYFKLQGIEHQLTIPYTPQQNGVAERKNRSLTEMVRCMLSDARLPIRFWGEAVLTAAYLQNRLPSRSIPKTPFEHFYGHKPDVSHLRVFGSKAYSFVPTERRRKLSEKAIEGVIIGYGNTVKGYRILDPKTARV 517          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A8D8MF92_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8MF92_CULPI)

HSP 1 Score: 152 bits (384), Expect = 2.470e-39
Identity = 97/281 (34.52%), Postives = 150/281 (53.38%), Query Frame = 0
Query:   12 LWHRRWAHCDKTMLGRL--PDAVVGMAIK--GKDPSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPFV-ESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRGK----LSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPVETDI-RTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQ--RTPFELYFGSKPDVSRARVWGCLAYAHVSGD-KAKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVV 278
            LWHRR+ H ++  L  L   + V G+ +   G D + +C  C+ GK   KP P     R       V  D+CGP   E + G K+F+   D  + ++  + +++KD+ +  F+ Y  L+  K    +S ++ DNG E R+     FC+ +GIR+EPTVP TP+ NP+   + RT+V   R ML DA +   +W   + T+ +  NRS    L+  +TP+EL+   KPDVS  RV+G   + HV  + + KL D+A +   +G++ N  GY V DP    VV
Sbjct:  157 LWHRRFGHLNEQSLKCLVQKEMVSGLDLSTAGTDDTVVCESCVVGKQTRKPHPPREGRRSSRVLELVHTDVCGPVSPEGLDGMKYFVTFIDDWTHFVMVYLIRSKDEVMECFEEYEALVTAKFERPISRLKCDNGGEYRNKRFEGFCKKKGIRMEPTVPYTPEMNPLSERMNRTLVEKARAMLADAGVDKKFWGETMLTAAYLTNRSPTAALEMKKTPYELWESKKPDVSNIRVFGSDVFVHVPKELRRKLDDKAWKGTLVGYSHN--GYRVWDPKKRTVV 435          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A8D8CEN3_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8CEN3_CULPI)

HSP 1 Score: 150 bits (378), Expect = 5.150e-39
Identity = 104/298 (34.90%), Postives = 159/298 (53.36%), Query Frame = 0
Query:    6 SVANIHLWHRRWAHCDKTMLGRL--PDAVVGMAIKGKDPSP---LCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRG----KLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQN-PVETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQ--RTPFELYFGSKPDVSRARVWGCLAYAHVSGDK-AKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVVRVVRTLKCDE 288
            S + + LWHRR+ H   T L +L   + V G+ + GK+  P   +C  C+KGK    P     +PR   P   +  D+CGPF   S +G K F+   D  + + + + L+ K + L +F+ YA +       K++ +R DNG E  +     +C   GI +EPTVP TP+QN   E   RT++   R M+ DAE+    W  AV  +V   NRS    L+  +TP+E++FG KP+VS+ RV+G  AY H+  +K +KL  ++   + +G+  N  GY + DP V   V V R +K +E
Sbjct:   86 SESKLSLWHRRYGHIGNTGLMKLIRNEMVEGLDV-GKNAKPEKEICECCMKGKQARLPFEEATKPRSSRPLELIHSDVCGPFNPASWNGKKMFVSFIDDYTHFAAVYILEAKSEVLDAFRKYAAMATAHFGTKIARLRSDNGREYINTEFKKYCDDAGIVMEPTVPYTPEQNGKSERFNRTVMERARAMMEDAEIYWYMWSEAVLAAVHVINRSPTAALRDAKTPYEMWFGRKPNVSKLRVFGSKAYTHIPKEKRSKLSAKSHVCVLVGYGMN--GYRLWDP-VKKQVIVARDVKVEE 379          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: B2CN78_DAPPU (Integrase n=1 Tax=Daphnia pulex TaxID=6669 RepID=B2CN78_DAPPU)

HSP 1 Score: 154 bits (389), Expect = 9.020e-39
Identity = 101/292 (34.59%), Postives = 153/292 (52.40%), Query Frame = 0
Query:    9 NIHLWHRRWAH--CDKTMLGRLPDAVVGMAIKGKD--PSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLL----RGKLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPV-ETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQRTPFELYFGSKPDVSRARVWGCLAYAHVSG-DKAKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVVRVVRTLKCDE 288
            ++ +WH+R+AH  C K         V G+ I      PS  CP C+ GKM+  P PT  + R    G  +  D+CGP  VE+  G KFF++  D  S + + +FLK K +    F+ YA+ L    R K+ ++R DNG E    +   +   +GIR E + P TP+QN V E   RTIV   R +L+   LP   W  A+  +V+  NR        TPF+ ++G+KPDVS  R++G  AY HV   ++ KL  +++   F+G++D+   Y   DP +S  ++  R +  DE
Sbjct:  415 SLAVWHQRFAHVSCRKIAKMAAQQLVKGLTIPANAVIPSQPCPGCIAGKMERSPFPT-GRTRAVQIGQLIHSDVCGPMHVETPGGAKFFVMFTDDYSGFRTVYFLKFKSEVADCFKDYAEHLHTETRQKIHTLRKDNGGEYTGHSFRAWLSEQGIRYETSAPHTPEQNGVSERANRTIVEGARSLLHAKHLPLELWGEAISCAVYVLNRVTSKAAPNTPFQNWYGTKPDVSNLRIFGSTAYIHVPKIERRKLDSKSLRCYFVGYSDSQKAYRFWDP-ISRKIKTSRDVIFDE 704          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A3S3RF48_9ACAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3RF48_9ACAR)

HSP 1 Score: 151 bits (382), Expect = 1.040e-38
Identity = 98/281 (34.88%), Postives = 146/281 (51.96%), Query Frame = 0
Query:    9 NIHLWHRRWAHCDKTMLGRLPD--AVVGMAIKGKDPSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRGKLSS----VRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPV-ETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQR-TPFELYFGSKPDVSRARVWGCLAYAHVSGDKA-KLQDRAIEVIFLGFADNSTGYLVQDPNVSNVV 278
            +I +WH R  H  K  +  +     V G++        +C  C KGKM  +P P T+  R       V  D+CGP   ++ SG ++F+   D  SR+   + L+ K +    F     L+    S+    +R D G E RS   + FC+ +GI  + T   TPQQN V E   RTIV   R ML  A+L + YW+ AV+T+V+ +NRS    L   TP+E +FG KPD+S  RV+GC AYAH+  +K  KL   + + IFLG++++   Y +Q+     +V
Sbjct:  112 SIEIWHHRLGHISKDTIRHMMTNKMVDGLSYSDITKDTVCEGCAKGKMSRRPFPNTSTNRSTKTLQLVHTDVCGPMQTKTFSGKRYFLTFIDDYSRFTVCYLLEHKSEVYDKFVECEALVTNMTSNRIKMLRSDEGCEYRSKKFNAFCKGKGIIQQFTASYTPQQNGVAERMNRTIVEAARCMLQAAQLDNKYWDEAVQTAVYLQNRSSTKALTNITPYEAWFGKKPDLSNLRVFGCQAYAHILIEKRQKLDANSTKCIFLGYSESIKAYRLQEVKTGKLV 392          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 154 bits (388), Expect = 2.050e-38
Identity = 108/281 (38.43%), Postives = 148/281 (52.67%), Query Frame = 0
Query:    8 ANIHLWHRRWAHCDKTMLGRLPDAVVGMAIKGKDPSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRG----KLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPV-ETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQ-RTPFELYFGSKPDVSRARVWGCLAYAHVSGD-KAKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVVR 279
            A+ +LWH+R  H  +  L  L    +    K     P C  CL GK       +++  R     S V  D+CGP  VES+ G+++F+   D  SR +  +FL+TKDQ    F+ +  ++      KL  +R DNG E  S     +CR+ GIR E TVPRTPQ N V E   RTI+  VR ML+ A+LP P+W  AVR + +  NRS    L    P +L+ G  P  S  RV+GCLAYAHVS + + KL  R    IF+G+ D   GY + DP    ++R
Sbjct:  249 ASQNLWHQRLGHMSEKGLSTLIKKELINVDKDAALDP-CNHCLFGKQHRVSFNSSSTKRSELL-SLVHSDVCGPLEVESLGGNRYFLTFIDDASRKVWVYFLQTKDQVFDYFKLFHVMVERETGKKLKCLRSDNGGEYSSKQFDAYCRSYGIRHEKTVPRTPQHNGVAERMNRTIMERVRSMLSMAKLPKPFWGEAVRAACYLINRSPSVPLDFEVPEKLWSGKDPSYSHLRVFGCLAYAHVSKELRQKLDARTTPCIFIGYGDEEFGYRLWDPKEKKIIR 527          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A8D8CKX4_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8CKX4_CULPI)

HSP 1 Score: 150 bits (378), Expect = 3.140e-38
Identity = 104/298 (34.90%), Postives = 159/298 (53.36%), Query Frame = 0
Query:    6 SVANIHLWHRRWAHCDKTMLGRL--PDAVVGMAIKGKDPSP---LCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRG----KLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQN-PVETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQ--RTPFELYFGSKPDVSRARVWGCLAYAHVSGDK-AKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVVRVVRTLKCDE 288
            S + + LWHRR+ H   T L +L   + V G+ + GK+  P   +C  C+KGK    P     +PR   P   +  D+CGPF   S +G K F+   D  + + + + L+ K + L +F+ YA +       K++ +R DNG E  +     +C   GI +EPTVP TP+QN   E   RT++   R M+ DAE+    W  AV  +V   NRS    L+  +TP+E++FG KP+VS+ RV+G  AY H+  +K +KL  ++   + +G+  N  GY + DP V   V V R +K +E
Sbjct:   68 SESKLSLWHRRYGHIGNTGLMKLIRNEMVEGLDV-GKNAKPEKEICECCMKGKQARLPFEEATKPRSSRPLELIHSDVCGPFNPASWNGKKMFVSFIDDYTHFAAVYILEAKSEVLDAFRKYAAMATAHFGTKIARLRSDNGREYINTEFKKYCDDAGIVMEPTVPYTPEQNGKSERFNRTVMERARAMMEDAEIDWNKWSEAVLAAVHLINRSPTTALRDAKTPYEMWFGRKPNVSKLRVFGSKAYTHIPKEKRSKLSAKSHVCVLVGYGMN--GYRLWDP-VKKQVIVARDVKVEE 361          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A182GGE6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GGE6_AEDAL)

HSP 1 Score: 152 bits (384), Expect = 6.970e-38
Identity = 98/286 (34.27%), Postives = 154/286 (53.85%), Query Frame = 0
Query:    9 NIHLWHRRWAHCDKTMLGRLP-----DAVVGMAIKGKDPSPL-CPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPFVES-ISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRGK----LSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPVETDI-RTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNR--SLRGQLQRTPFELYFGSKPDVSRARVWGCLAYAHVSGDKAKLQD-RAIEVIFLGFADNSTGYLVQDPNVSNVV 278
            ++ LWHRR+ H +K  L +L      D +      G D   + C PC+ GK   KP   +A     +      + +CGP   +  +G ++F    D  + ++  F +KTKD+ L  F+ Y  L+  K    +S ++ DNG E ++ A+  FCR +GI+++ TVP TPQQN     + RT+V  VR ML DA++   +W  A+ T+ +  NR  +      +TP EL+ G +PDVSR R +GC+AY HV  ++ K  D +A   +F+G+A N  GY V +P   ++V
Sbjct:  249 SLELWHRRFGHLNKRQLEQLVCRNLVDGMQPTQCDGSDDKVIVCEPCIIGKQSRKPF--SAHEGKRSSRVLEVIHVCGPVQPAGRNGERYFATFMDDWTHFVMTFPMKTKDEVLGWFEYYESLVTAKFGLNISRLKCDNGGEYQNKALLSFCRRKGIQVDFTVPYTPQQNGTSERMNRTLVERVRAMLEDAKIEKVFWVQAIETAAYIVNRCPTSANDSGKTPVELWNGRRPDVSRLRTFGCVAYVHVPKERRKKLDAKAWRGVFVGYAPN--GYRVWNPKTGSIV 530          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A6V7M0T8_9HYME (Uncharacterized protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M0T8_9HYME)

HSP 1 Score: 152 bits (383), Expect = 9.620e-38
Identity = 95/279 (34.05%), Postives = 146/279 (52.33%), Query Frame = 0
Query:   10 IHLWHRRWAHCDKTMLGRL--PDAVVGMAIKGKDPSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFL--KTKDQALV-SFQGYAKLLRG-KLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPV-ETDIRTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQRTPFELYFGSKPDVSRARVWGCLAYAHVSGD-KAKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVV 278
            IH WHRR+ H D   + +L   +   G+ IK  +   +C  C+KGK+  KP P  +  +       + +DLCGP   +++ G ++ M + D  SRY   + L  K++D+ ++  F    K   G K    R D G E  S  +  F   +G++++ T P TP+QN V E   RT+V   R ML DA L   YW  AV T+ + +N        +TPFEL+F  KPD+S  RV+GC AYAH+    + KL ++  E IF+G++  S  Y + + N   ++
Sbjct:  311 IHTWHRRFGHRDPKAIEKLIENELAEGVEIKKCNEIQVCSSCIKGKLSRKPFPKESLSKTTKRLELLHMDLCGPMPTKTVGGRRYLMTIIDDFSRYTFVYLLTEKSQDERVIRDFIAEMKTQYGEKPKCFRSDRGGEFMSHDLMQFLAKQGVKVQRTAPYTPEQNGVAERKNRTLVEATRTMLIDAGLADQYWGEAVMTAGYVQNLLPTRVRDKTPFELFFDKKPDISHLRVYGCKAYAHIPKQMRLKLDNKTRECIFVGYSQESKAYRLLEENTGKIL 589          
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 151 bits (381), Expect = 1.780e-37
Identity = 92/284 (32.39%), Postives = 147/284 (51.76%), Query Frame = 0
Query:    7 VANIHLWHRRWAHCDKTMLGRLPDA--VVGMAIKGKDPSPLCPPCLKGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPF-VESISGHKFFMIVRDLGSRYLSGFFLKTKDQALVSFQGYAKLLRG----KLSSVRLDNG-ELRSGAMSDFCRAEGIRIEPTVPRTPQQNPVETDI-RTIVADVRVMLNDAELPHPYWEYAVRTSVWYRNRSLRGQLQ-RTPFELYFGSKPDVSRARVWGCLAYAHVSGD-KAKLQDRAIEVIFLGFADNSTGYLVQDPNVSNVVR 279
            V  +  WH R+ H +   + +L     V GM     + S  C  C + KM   P+P  +  R   P   +  D+CGP   +SI G K+ +   D  +RY++ +FLK K +    FQ Y  ++      K+ ++R DNG E  S   S +C  +GI  + + P TPQQN V   + RT++   + M+  A +P  +W  AV T+V+  NRS    L  +TP+EL+F  KPDVS  +V+G + + H+  + + KL  R+ + +F+G+  ++ GY + D    N VR
Sbjct:  368 VPTLREWHCRYGHLNFGYINKLAQGNLVTGMKYTKGETSQECEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVR 651          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81244.18999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A085MVT7_9BILA3.200e-4137.55Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
A0A8D8MF92_CULPI2.470e-3934.52Copia protein (Fragment) n=1 Tax=Culex pipiens Tax... [more]
A0A8D8CEN3_CULPI5.150e-3934.90Copia protein (Fragment) n=1 Tax=Culex pipiens Tax... [more]
B2CN78_DAPPU9.020e-3934.59Integrase n=1 Tax=Daphnia pulex TaxID=6669 RepID=B... [more]
A0A3S3RF48_9ACAR1.040e-3834.88Retrovirus-related Pol polyprotein from transposon... [more]
UPI001F00A0482.050e-3838.43DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A8D8CKX4_CULPI3.140e-3834.90Copia protein (Fragment) n=1 Tax=Culex pipiens Tax... [more]
A0A182GGE6_AEDAL6.970e-3834.27Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A6V7M0T8_9HYME9.620e-3834.05Uncharacterized protein n=1 Tax=Bracon brevicornis... [more]
A0A7D9DPP1_PARCT1.780e-3732.39Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 60..235
e-value: 5.5E-21
score: 76.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 69..175
e-value: 7.2E-9
score: 35.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 66..224
score: 15.469
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 145..280
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 145..280
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 67..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81244contigM-pyrifera_M_contig81244:42..905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81244.18999.1mRNA_M-pyrifera_M_contig81244.18999.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81244 42..905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81244.18999.1 ID=prot_M-pyrifera_M_contig81244.18999.1|Name=mRNA_M-pyrifera_M_contig81244.18999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
VPHAISVANIHLWHRRWAHCDKTMLGRLPDAVVGMAIKGKDPSPLCPPCL
KGKMKAKPIPTTAQPRDYAPGSSVAVDLCGPFVESISGHKFFMIVRDLGS
RYLSGFFLKTKDQALVSFQGYAKLLRGKLSSVRLDNGELRSGAMSDFCRA
EGIRIEPTVPRTPQQNPVETDIRTIVADVRVMLNDAELPHPYWEYAVRTS
VWYRNRSLRGQLQRTPFELYFGSKPDVSRARVWGCLAYAHVSGDKAKLQD
RAIEVIFLGFADNSTGYLVQDPNVSNVVRVVRTLKCDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf