prot_M-pyrifera_M_contig8110.18973.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8110.18973.1
Unique Nameprot_M-pyrifera_M_contig8110.18973.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
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BLAST of mRNA_M-pyrifera_M_contig8110.18973.1 vs. uniprot
Match: A0A6H5JEW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 7.710e-36
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 0 
Query:    1 KHRPPPGHPHPECPARVSTAKTELDGLEGVKWATPSSLSSDGDKAATTAAIERVHKREYLDEVKRICAKGGGAADFDT 78
            KHRPPPGHPHPECPARVSTA+ ELD LEG++WATPSSL S+  +    AAIERVH  EYL+EV+R+CAKGGGAADFDT
Sbjct:   37 KHRPPPGHPHPECPARVSTARIELDQLEGIEWATPSSLRSEKGRERALAAIERVHNPEYLEEVRRVCAKGGGAADFDT 114
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BLAST of mRNA_M-pyrifera_M_contig8110.18973.1 vs. uniprot
Match: D7G0C2_ECTSI (Histone deacetylase family protein, plastidal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C2_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 2.070e-35
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 0 
Query:    1 KHRPPPGHPHPECPARVSTAKTELDGLEGVKWATPSSLSSDGDKAATTAAIERVHKREYLDEVKRICAKGGGAADFDT 78
            KHRPPPGHPHPECPARVSTA++ELD LEG++WATPSSL S+  +  T AAIERVH  EYL+EV R+CAKGGGAADFDT
Sbjct:   94 KHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLQSEKGRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDT 171
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BLAST of mRNA_M-pyrifera_M_contig8110.18973.1 vs. uniprot
Match: A0A0W8FAV3_9ZZZZ (Acetylspermidine deacetylase n=5 Tax=root TaxID=1 RepID=A0A0W8FAV3_9ZZZZ)

HSP 1 Score: 49.7 bits (117), Expect = 4.410e-5
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:   10 HPECPARVSTA--KTELDGLEGVKWATPSSLSSDGDKAATTAAIERVHKREYLDEVKRICAKGGGAADFDT 78
            HPE   R++    + E +GL+ ++  TP        K AT   +E +H R Y+D+VK IC +GGG  D DT
Sbjct:   22 HPERKERLTAILDRIESEGLD-IECITP--------KPATIEQVESIHGRNYIDQVKAICERGGGHLDIDT 83
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8110.18973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JEW7_9PHAE7.710e-3675.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0C2_ECTSI2.070e-3576.92Histone deacetylase family protein, plastidal n=1 ... [more]
A0A0W8FAV3_9ZZZZ4.410e-538.03Acetylspermidine deacetylase n=5 Tax=root TaxID=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..78
e-value: 1.0E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8110contigM-pyrifera_M_contig8110:546..2581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8110.18973.1mRNA_M-pyrifera_M_contig8110.18973.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8110 546..2581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8110.18973.1 ID=prot_M-pyrifera_M_contig8110.18973.1|Name=mRNA_M-pyrifera_M_contig8110.18973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
KHRPPPGHPHPECPARVSTAKTELDGLEGVKWATPSSLSSDGDKAATTAA
IERVHKREYLDEVKRICAKGGGAADFDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037138His_deacetylse_dom_sf