mRNA_M-pyrifera_M_contig81013.18947.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81013.18947.1
Unique NamemRNA_M-pyrifera_M_contig81013.18947.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI000BA80C55 (mitogen-activated protein kinase-binding protein 1-like isoform X1 n=3 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80C55)

HSP 1 Score: 137 bits (346), Expect = 1.290e-33
Identity = 89/235 (37.87%), Postives = 130/235 (55.32%), Query Frame = 1
Query:    1 PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDAPKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTEDI-FVTVGKRHLKFWFIETSEEGKVSIE-----GRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            PL++   LERV+G T  SN A   +P +N  A  AGCV V+  +      Q H L S   T+TS+A+S DG+YLA GE G  P + VWD+  D  ++ +  G H+FG+  +AFS +   +V+ G QHD + +VWD  + +       AS +VS  ++  +F      FVTVG RH+KFW++E S   K  +E     GR+A+LG  R++ F  +      + D   AIT+ G LC
Sbjct:   24 PLSERAKLERVLGLTVSSNAALDCDPQQNVVAYPAGCVVVLYNVRKNR--QNHILSSSKKTITSLAFSWDGRYLATGECGHQPHLRVWDIQ-DCSQIAEFPG-HKFGINCVAFSPNLKYVVSVGSQHDMIVNVWDWKNNIKV-----ASNKVSCKVKALSFSAGGTYFVTVGNRHVKFWYLEYSRSTKYKLEPVPLMGRSAILGDQRNNYFCDVACGRGEMADSTYAITKSGLLC 249          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI0009E1A49B (mitogen-activated protein kinase-binding protein 1-like isoform X2 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1A49B)

HSP 1 Score: 137 bits (345), Expect = 1.690e-33
Identity = 89/239 (37.24%), Postives = 129/239 (53.97%), Query Frame = 1
Query:    1 PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDA-PKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTED--IFVTVGKRHLKFWFIET-SEEGKVS----IEGRTAVLGAHRSSTFKQIE----VIGDLCLAITEDGHLCTV 681
            P+ +   LE+V+G T   N   A +P     A  AGCV V+         Q   L +   T+TSVA+S DGKYLA GE G  P V VWDM   + P++ +    H+FG+A +AFS +   + + G QHD + ++W+  +  +K    K S +VS     A  F+E+   FVTVG RH+KFW+ +T S + KVS    I GR A+LG  R++TF  +     V  D+   +T  G LC++
Sbjct:   29 PITERATLEKVLGLTVSRNACLACDPVSGLVAYPAGCVVVL--FNPRKNKQSFVLNTSKKTITSVAFSGDGKYLATGESGHMPCVRVWDMEDQSHPQISEMAKGHKFGIACVAFSPNLKYVASVGFQHDMIVNIWNWKTG-TKVASNKVSSKVS-----ALSFSENGSFFVTVGVRHVKFWYFDTESNKSKVSKTLVINGRAALLGEQRNNTFCDVACGRGVNSDITYCVTNSGLLCSI 259          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI000F558B27 (mitogen-activated protein kinase-binding protein 1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F558B27)

HSP 1 Score: 135 bits (341), Expect = 5.670e-33
Identity = 87/239 (36.40%), Postives = 129/239 (53.97%), Query Frame = 1
Query:    1 PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDA-PKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTED--IFVTVGKRHLKFWFIET-SEEGKVS----IEGRTAVLGAHRSSTFKQIE----VIGDLCLAITEDGHLCTV 681
            P+ +   L++V+G T   N A A +P     A  AGCV V+         Q   L +   T+TSVA+S DGKYLA GE G  P V VWDM   + P++ + +  H+FG++ +AFS +   + + G QHD + ++W+  S    +   K S +VS     A  F+E+   FVTVG RH+KFW+ +T S + KVS    I GR  +LG  R++TF  +     V  D+   +T  G LC++
Sbjct:   29 PITERATLDKVLGLTVSRNAALACDPLSGVVAYPAGCVVVL--FNPRKNQQSFVLNTSRKTITSVAFSGDGKYLATGESGHMPCVRVWDMEDQSHPQISEMVKGHKFGISCVAFSPNLKYVASVGFQHDMIVNIWNWKSGTKVACN-KVSSKVS-----ALSFSENGSYFVTVGVRHVKFWYFDTESNKSKVSKTLVINGRAGLLGEQRNNTFCDVACGRGVNSDITYCVTSSGLLCSI 259          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: A0A8K1CRS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRS9_PYTOL)

HSP 1 Score: 134 bits (338), Expect = 1.490e-32
Identity = 82/244 (33.61%), Postives = 126/244 (51.64%), Query Frame = 1
Query:    1 PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDAPKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-----DIFVTVGKRHLKFWFIETSEE---------GKVSIEGRTAVLGAHRSSTFKQIEVIGDLC----LAITEDGHLCT 678
            P    L LERV+G T+ SN A A NP   E A  AGC+ VI  L     V+ + ++    TV+ + +SP+G+YLA+GEKG  P + +WD +     L   +  H++GVA +AFS  G  L++ G+ HD   + WD+    S + +  A V    V++      +     + FV+VG+RH KFWF++   +         G   ++GR+AV+ A   +TF  +      C     A+T DG LC+
Sbjct:   40 PPRSRLTLERVLGVTSLSNAAVAVNPATGEIAYAAGCIVVIYNLRRNKQVRYYRVEK---TVSCLCFSPNGQYLAIGEKGYLPAITIWDGTDGT--LCAELQRHKYGVACMAFSRDGRYLLSAGLVHDQHLYAWDLVRDASSN-QMNAKVMGVAVVEDKVLSMDYCHEGNFFVSVGERHFKFWFLDVDNQFLVTGFEVDGVPELQGRSAVMAAKEDATFTSVGCGAGACKLKTYAVTSDGTLCS 277          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI001F4F62CF (mitogen-activated protein kinase-binding protein 1 isoform X1 n=4 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F62CF)

HSP 1 Score: 134 bits (336), Expect = 2.790e-32
Identity = 88/250 (35.20%), Postives = 129/250 (51.60%), Query Frame = 1
Query:    4 LAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDM------------SSDAPKLVKSIGL-----HRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-DIFVTVGKRHLKFWFIETSEEGK----VSIEGRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            +++ + LERV+G T  SN A   +P   + A  AGC  V+         Q+H L S   T+TSVA+S DG+YLA GE G  P V VWD+            ++  P L   + +     H++G+  +AFS S   +V+ G QHD + +VWD  S +       AS +VS  ++  +F      FVTVG RH+KFW++E S   K    V + GR+A+LG  R++ F  +      + D   AIT+ G LC
Sbjct:   25 ISERVKLERVLGLTVSSNAALDCDPDSEQIAYSAGCTVVL--FNPRKGRQQHLLNSSRKTITSVAFSADGRYLATGECGHLPSVRVWDLHQPQPPQPPLPDAAPPPHLAAGVQVAEFTGHKYGINCVAFSPSHKYVVSVGSQHDMIVNVWDWRSNIKV-----ASNKVSTKVKAVSFAENGSYFVTVGNRHVKFWYLEYSRSAKYKEPVPLMGRSAILGEQRNNYFCDVACGRGEMADSTYAITKSGLLC 267          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI00083C27A4 (mitogen-activated protein kinase-binding protein 1 isoform X1 n=5 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C27A4)

HSP 1 Score: 133 bits (334), Expect = 5.130e-32
Identity = 85/243 (34.98%), Postives = 128/243 (52.67%), Query Frame = 1
Query:    4 LAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSD--------APKL--VKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-DIFVTVGKRHLKFWFIETSE----EGKVSIEGRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            ++  + LERV+G T  +N A A++P     A  AGC  V+    +    Q H + +   TVTS+A+S  G+YL  GE G  P V +WD+ SD        AP++  V     H++G++ +AFS +   +V+ G QHD + +VWD  S +       AS ++S  ++  AF      FVTVG RH+KFWF+E  +    +  V + GR+A+LG  R++ F  +       GD   AIT  G LC
Sbjct:   26 ISDRIKLERVLGVTVNNNAALASDPNSETVAYPAGCTVVL--FNTTTGQQSHIINTSKKTVTSLAFSSCGRYLVTGECGHQPAVRIWDLQSDPQPAQTGLAPQVQQVAEFVGHKYGISCVAFSPTNKFVVSIGTQHDMIVNVWDWKSNIKV-----ASNKISTKVKSIAFADNGSYFVTVGNRHVKFWFLEYGKNKYNKEAVPLMGRSAILGEQRNNYFCDVACGKSQCGDSTYAITRSGLLC 261          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: A0A8K0CIZ9_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CIZ9_9COLE)

HSP 1 Score: 132 bits (333), Expect = 6.960e-32
Identity = 86/240 (35.83%), Postives = 126/240 (52.50%), Query Frame = 1
Query:   10 QSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSD--------APKL--VKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-DIFVTVGKRHLKFWFIETSE---EGKVSIEGRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            Q + LERV+G T  SN A  ++      A  AGC  V+    ++   Q H + S   T+TS+A+S  G+YL  GE G  P V VWD+ SD        AP++  V     H++G++ +AFS +   +V+ G QHD + +VWD  + +       AS +VS  ++  AF      FVTVG RH+KFWF+E  +   +  V + GR+A+LG  R++ F  +       GD   AIT  G LC
Sbjct:    4 QQIKLERVLGVTVNSNAALDSDSNTETVAYPAGCTVVL--FNTQTGHQSHIINSSRKTITSLAFSSCGRYLVTGECGHQPAVRVWDLQSDPQPGPPGVAPQVQQVAEFLSHKYGISCVAFSPTSKYVVSIGTQHDMIVNVWDWKNNIKV-----ASNKVSTKVKALAFAENGSYFVTVGNRHVKFWFLEYGKAKYKEAVPLMGRSAILGEQRNNYFCDVACGKAHCGDSTYAITRSGLLC 236          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI001CF2ACEE (mitogen-activated protein kinase-binding protein 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF2ACEE)

HSP 1 Score: 132 bits (332), Expect = 9.770e-32
Identity = 86/239 (35.98%), Postives = 129/239 (53.97%), Query Frame = 1
Query:    1 PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDA-PKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTED--IFVTVGKRHLKFWFIET-SEEGKVS----IEGRTAVLGAHRSSTFKQIE----VIGDLCLAITEDGHLCTV 681
            PL +   LE+V+G T   N A A +P     A  AGCV V+         Q   L +   T++S+A+S DGKYLA GE G  P V +WDM   + P++ +    H+FGVA +AFS +   + + G QHD + ++W+  +  +K    K S +VS     A  F+E+   FVTVG RH+KFW+ +T S + K+S    I GR A+LG  R++ F  +     +  D+   +T  G LC++
Sbjct:   29 PLTERATLEKVLGLTVSKNAALACDPLSGVVAYPAGCVVVL--FNPRKNKQSFVLNTSKKTISSLAFSGDGKYLATGESGHMPSVRIWDMEDPSHPQIAEMTKGHKFGVACVAFSPNLKYVASVGFQHDMIVNIWNWKAG-AKVASNKVSSKVS-----ALSFSENGSYFVTVGVRHVKFWYFDTESNKSKLSKTLVISGRAALLGEQRNNKFCDVACGRGLNSDITYCVTSSGLLCSI 259          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI000C20363E (WD repeat-containing protein 62 isoform X5 n=2 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20363E)

HSP 1 Score: 129 bits (325), Expect = 8.200e-31
Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 1
Query:   22 LERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDA----------PKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-DIFVTVGKRHLKFWFIETSEEG---KVSIEGRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            LE+V+G T  SN A  ++P  +  A  AGC  V+    ++   Q H + +   ++TS+A+S  G+YL  GE G  P V VWD+ SD           P+ +     H++G+  +AFS S   +V+ G QHD + +VWD  + +       AS +VS+ ++  AF      FVTVG RH+KFWF+E  +      V + GR+A+LG  R++ F  +       GD   A+T  G LC
Sbjct:   26 LEKVLGVTVSSNSALHSSPNGDLIAYPAGCTVVL--FNTQTGEQNHIVNTNRKSITSLAFSSCGRYLVTGEFGHQPAVRVWDLQSDPQSTQPGLFPQPQQIAEFQSHKYGICCVAFSPSNKFVVSIGTQHDMIVNVWDWRNNVKV-----ASNKVSMKVKALAFAENGSYFVTVGNRHVKFWFLEYGKAKYTEAVPLMGRSAILGVQRNNYFCDVACGRGQCGDSTYAVTRSGLLC 254          
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Match: UPI00143CC914 (mitogen-activated protein kinase-binding protein 1 isoform X4 n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143CC914)

HSP 1 Score: 129 bits (325), Expect = 8.260e-31
Identity = 87/229 (37.99%), Postives = 123/229 (53.71%), Query Frame = 1
Query:   22 LERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYVQEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMS--SDAPKLVKSIGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASVRVSVVIQGAAFFTE-DIFVTVGKRHLKFWFIETSEEGK----VSIEGRTAVLGAHRSSTFKQIEV----IGDLCLAITEDGHLC 675
            L+RV+G T  SN A   +PT    A  AGC  V+         Q H L     TVTS+A S DG+ LA GE G  P V VWD+S  S+A ++ +  G H++G+  +AFS S   +V+ G QHD + +VWD  + +       AS +VS  ++   F    + FVTVG RH+KFW++E S   K    V + GR+A+LG  R++ F  +      + D   AIT+ G LC
Sbjct:   31 LDRVLGVTVSSNAALDCDPTSELVAYPAGCTVVL--FNPRKNTQTHVLNGCRKTVTSLALSGDGRLLATGECGHMPNVRVWDISDSSNAVQIAEFSG-HKYGINCVAFSPSNKYVVSVGSQHDMIVNVWDWRNNVKV-----ASNKVSSKVKAVCFAENGNYFVTVGNRHVKFWYLEYSRSAKYKEPVPLMGRSAILGEQRNNDFVDVACGRGEMADSTYAITKTGLLC 251          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81013.18947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000BA80C551.290e-3337.87mitogen-activated protein kinase-binding protein 1... [more]
UPI0009E1A49B1.690e-3337.24mitogen-activated protein kinase-binding protein 1... [more]
UPI000F558B275.670e-3336.40mitogen-activated protein kinase-binding protein 1... [more]
A0A8K1CRS9_PYTOL1.490e-3233.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001F4F62CF2.790e-3235.20mitogen-activated protein kinase-binding protein 1... [more]
UPI00083C27A45.130e-3234.98mitogen-activated protein kinase-binding protein 1... [more]
A0A8K0CIZ9_9COLE6.960e-3235.83Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
UPI001CF2ACEE9.770e-3235.98mitogen-activated protein kinase-binding protein 1... [more]
UPI000C20363E8.200e-3134.32WD repeat-containing protein 62 isoform X5 n=2 Tax... [more]
UPI00143CC9148.260e-3137.99mitogen-activated protein kinase-binding protein 1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81013contigM-pyrifera_M_contig81013:258..938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score130.2
Seed ortholog evalue1.2e-27
Seed eggNOG ortholog8010.XP_010897208.1
Preferred nameWDR62
KEGG koko:K21762,ko:K21763
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0000922,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005682,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007099,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015630,GO:0016043,GO:0016070,GO:0019827,GO:0021537,GO:0021543,GO:0021987,GO:0022008,GO:0022402,GO:0022607,GO:0030154,GO:0030532,GO:0030900,GO:0031021,GO:0031023,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051298,GO:0051726,GO:0060322,GO:0065007,GO:0070925,GO:0071011,GO:0071013,GO:0071704,GO:0071840,GO:0072686,GO:0090304,GO:0097150,GO:0097159,GO:0097525,GO:0098534,GO:0098727,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1902850,GO:1903047,GO:1990904
EggNOG free text desc.WD repeat domain 62
EggNOG OGs38C7A@33154,3BB15@33208,3CU3Z@33213,487K0@7711,498F9@7742,49RQ0@7898,KOG1408@1,KOG1408@2759
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons1
Model size681
Cds size681
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816715.3845212-CDS-M-pyrifera_M_contig81013:257..9381622816715.3845212-CDS-M-pyrifera_M_contig81013:257..938Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81013 258..938 +
1692278136.4724796-CDS-M-pyrifera_M_contig81013:257..9381692278136.4724796-CDS-M-pyrifera_M_contig81013:257..938Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81013 258..938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81013.18947.1prot_M-pyrifera_M_contig81013.18947.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81013 258..938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81013.18947.1

>prot_M-pyrifera_M_contig81013.18947.1 ID=prot_M-pyrifera_M_contig81013.18947.1|Name=mRNA_M-pyrifera_M_contig81013.18947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
PLAQSLALERVIGSTTKSNVAFAANPTKNEFATVAGCVTVISALGSEGYV
QEHFLQSGLNTVTSVAYSPDGKYLAVGEKGKDPLVNVWDMSSDAPKLVKS
IGLHRFGVATLAFSASGSQLVTCGVQHDGMCHVWDVASFLSKSLEPKASV
RVSVVIQGAAFFTEDIFVTVGKRHLKFWFIETSEEGKVSIEGRTAVLGAH
RSSTFKQIEVIGDLCLAITEDGHLCTV
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mRNA from alignment at M-pyrifera_M_contig81013:258..938+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81013.18947.1 ID=mRNA_M-pyrifera_M_contig81013.18947.1|Name=mRNA_M-pyrifera_M_contig81013.18947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig81013:258..938+ (Macrocystis pyrifera P11B4 male)
CCTCTGGCGCAGAGCCTCGCCCTGGAGCGCGTGATTGGAAGCACGACAAA GAGCAACGTTGCCTTTGCGGCCAACCCCACCAAGAACGAGTTTGCTACCG TTGCAGGCTGCGTCACCGTCATCTCAGCCCTCGGCAGCGAGGGCTACGTG CAGGAGCATTTCCTCCAGAGCGGCCTCAACACCGTCACCAGCGTGGCCTA CTCGCCCGACGGCAAGTACCTTGCCGTGGGAGAGAAGGGCAAGGACCCTC TGGTCAACGTCTGGGACATGAGCTCGGACGCCCCCAAGCTCGTCAAGAGC ATTGGCCTGCACCGCTTCGGCGTGGCCACCCTGGCCTTCTCTGCCTCGGG CAGCCAGCTGGTCACCTGTGGCGTGCAGCACGACGGCATGTGCCACGTCT GGGACGTTGCGTCTTTCCTCTCGAAGAGCCTCGAGCCCAAGGCTTCGGTC CGCGTCTCGGTTGTCATCCAGGGCGCCGCCTTCTTCACGGAGGACATCTT CGTCACCGTGGGCAAGCGCCATCTGAAGTTCTGGTTCATTGAGACCAGCG AGGAGGGCAAGGTCTCCATCGAGGGACGCACCGCCGTCTTGGGAGCGCAC CGCAGCTCCACCTTCAAGCAGATTGAGGTCATTGGCGACCTCTGCCTCGC CATCACCGAAGACGGCCACCTGTGCACCGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81013:258..938+

>mRNA_M-pyrifera_M_contig81013.18947.1 ID=mRNA_M-pyrifera_M_contig81013.18947.1|Name=mRNA_M-pyrifera_M_contig81013.18947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig81013:258..938+ (Macrocystis pyrifera P11B4 male)
CCTCTGGCGCAGAGCCTCGCCCTGGAGCGCGTGATTGGAAGCACGACAAA
GAGCAACGTTGCCTTTGCGGCCAACCCCACCAAGAACGAGTTTGCTACCG
TTGCAGGCTGCGTCACCGTCATCTCAGCCCTCGGCAGCGAGGGCTACGTG
CAGGAGCATTTCCTCCAGAGCGGCCTCAACACCGTCACCAGCGTGGCCTA
CTCGCCCGACGGCAAGTACCTTGCCGTGGGAGAGAAGGGCAAGGACCCTC
TGGTCAACGTCTGGGACATGAGCTCGGACGCCCCCAAGCTCGTCAAGAGC
ATTGGCCTGCACCGCTTCGGCGTGGCCACCCTGGCCTTCTCTGCCTCGGG
CAGCCAGCTGGTCACCTGTGGCGTGCAGCACGACGGCATGTGCCACGTCT
GGGACGTTGCGTCTTTCCTCTCGAAGAGCCTCGAGCCCAAGGCTTCGGTC
CGCGTCTCGGTTGTCATCCAGGGCGCCGCCTTCTTCACGGAGGACATCTT
CGTCACCGTGGGCAAGCGCCATCTGAAGTTCTGGTTCATTGAGACCAGCG
AGGAGGGCAAGGTCTCCATCGAGGGACGCACCGCCGTCTTGGGAGCGCAC
CGCAGCTCCACCTTCAAGCAGATTGAGGTCATTGGCGACCTCTGCCTCGC
CATCACCGAAGACGGCCACCTGTGCACCGTTCCTCTGGCGCAGAGCCTCG
CCCTGGAGCGCGTGATTGGAAGCACGACAAAGAGCAACGTTGCCTTTGCG
GCCAACCCCACCAAGAACGAGTTTGCTACCGTTGCAGGCTGCGTCACCGT
CATCTCAGCCCTCGGCAGCGAGGGCTACGTGCAGGAGCATTTCCTCCAGA
GCGGCCTCAACACCGTCACCAGCGTGGCCTACTCGCCCGACGGCAAGTAC
CTTGCCGTGGGAGAGAAGGGCAAGGACCCTCTGGTCAACGTCTGGGACAT
GAGCTCGGACGCCCCCAAGCTCGTCAAGAGCATTGGCCTGCACCGCTTCG
GCGTGGCCACCCTGGCCTTCTCTGCCTCGGGCAGCCAGCTGGTCACCTGT
GGCGTGCAGCACGACGGCATGTGCCACGTCTGGGACGTTGCGTCTTTCCT
CTCGAAGAGCCTCGAGCCCAAGGCTTCGGTCCGCGTCTCGGTTGTCATCC
AGGGCGCCGCCTTCTTCACGGAGGACATCTTCGTCACCGTGGGCAAGCGC
CATCTGAAGTTCTGGTTCATTGAGACCAGCGAGGAGGGCAAGGTCTCCAT
CGAGGGACGCACCGCCGTCTTGGGAGCGCACCGCAGCTCCACCTTCAAGC
AGATTGAGGTCATTGGCGACCTCTGCCTCGCCATCACCGAAGACGGCCAC
CTGTGCACCGTT
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