mRNA_M-pyrifera_M_contig80956.18932.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80956.18932.1
Unique NamemRNA_M-pyrifera_M_contig80956.18932.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A1X2GQG6_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GQG6_9FUNG)

HSP 1 Score: 171 bits (433), Expect = 1.000e-44
Identity = 99/242 (40.91%), Postives = 148/242 (61.16%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY------RVVEGVIEEIPAAER-------AKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRL-LMGTDDGAATPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLL+ GD ++++YN  +++G+  R+G+LL+C  H+Y+ID++       VVE  I ++P  ER       AKA+G E         E    +  + H  RKWA +D+R++FKRR+L R VA+ELF +DG+N L      E D +F  ++    RVT  S +  +G+ +G      T  G+A   +G+      +D+T +W + +I+NFQYLM+LN +AGRSYNDLTQYPVFPW+L DYTS +L
Sbjct: 2277 RLLEPGDMVIEVYNVSQIEGLDAREGLLLLCKQHIYLIDNFFQRANGEVVE--IWDVPKHERDEYLLLLAKAAGMET--------EHPLMTSGDVHACRKWASIDLREVFKRRFLFRDVALELFFSDGQNALITVGKAERDDLFNKLA---NRVTTSSDDSKTGSILGNADKESTTFGSAFRFVGIFGNSTLQDLTQQWQRREITNFQYLMYLNAIAGRSYNDLTQYPVFPWILADYTSKQL 2505          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A197JLQ3_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JLQ3_9FUNG)

HSP 1 Score: 171 bits (432), Expect = 1.370e-44
Identity = 98/239 (41.00%), Postives = 148/239 (61.92%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY------RVVEGVIEEIPAAERAKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGV-VTKLFR----RDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLL+ GD + ++YN  RV G+   +G+LL+C  ++Y+ID+Y       VV+  I E+  +ER +      +      + + D S++  H  RKW F DI+++ +RRYLLR VA+ELF  DGRN+L   ++++ D V+  ++ ++  +   SL+   G+    +   +++  A   LG  +  +F      DIT KW + +ISNFQYLMHLNT+AGR+YNDLTQYPVFPW+L DYTSAEL
Sbjct: 2483 RLLEAGDVVYEVYNMSRVTGLDAVEGLLLLCKHNMYLIDNYFQKMDGEVVD--ISEVADSERDQYLQLLASNNPPVSQPEADTSEVR-HQCRKWRFEDIKEVHRRRYLLRNVALELFFVDGRNYLINLNLQQRDIVYNQLASRVGSLANNSLQV--GDRSAMVDPNSNNNQAPSSLGSKLANIFAPSSIADITAKWEKHEISNFQYLMHLNTMAGRTYNDLTQYPVFPWILADYTSAEL 2716          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A1X2H1D5_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H1D5_SYNRA)

HSP 1 Score: 168 bits (425), Expect = 1.170e-43
Identity = 97/242 (40.08%), Postives = 144/242 (59.50%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY------RVVEGVIEEIPAAER-------AKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRL-LMGTDDGAATPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLLD+GD +L +YN  ++ G+  ++G+LL+C  ++Y++D++       VVE  I ++P  ER       A+A+G E        +E GD      H  RKWA  DIR+++KRR+L R VA+E+F  DGRN L   + +E D ++  ++ ++  V     E I G  + +  L G+  G +     +       D+THKW + +I+NFQYLM+LN +AGRSYNDLTQYPVFPW+L DY S EL
Sbjct: 2278 RLLDHGDMVLDVYNVSQIAGLDAKEGLLLLCKNNVYLVDNFFQRHDGEVVE--IWDVPEEERDQYLILLARAAGMETEPTM---DEMGDL-----HQCRKWANTDIREVYKRRFLFRDVALEIFFADGRNALITVEKQERDDLYAKLAGRVT-VAENVSESIIGTTVDKEGLHGSGFGGSFKLSSLFGSSTLSDLTHKWERREITNFQYLMYLNAIAGRSYNDLTQYPVFPWILADYDSPEL 2508          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: UPI0006447EC7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447EC7)

HSP 1 Score: 167 bits (423), Expect = 2.180e-43
Identity = 100/219 (45.66%), Postives = 124/219 (56.62%), Query Frame = 1
Query:  136 MYNCGRVDGMIKRDGVLLICTGHLYMIDDYRVVEGVIEEIPAAERAKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVF-DVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGV---VTKLFRRD-ITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTS 777
            MYNCG VDGM K +G+LL C  ++Y+ D Y   E   E     E+          V            I  H+S KW + ++R++ KRRYLLR VA+ELFS DGRN LFV  D    D V   +   +   T   +  ISG+        T D  +   LG+   +T ++R+  +T KW QGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVL DY S
Sbjct: 2557 MYNCGSVDGMDKIEGILLFCPANMYIFDGYTKDEQTGEVTEVEEKINMDWLVEGAVL-------PPKKIISHNSIKWGYEEVREVLKRRYLLRPVAMELFSTDGRNTLFVLKDELTRDDVHYKIITNVSNNTIGDVSGISGSQ-------TIDDDSRENLGMRERLTSMWRKSPLTMKWQQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLRDYES 2761          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A397ITN3_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397ITN3_9GLOM)

HSP 1 Score: 167 bits (422), Expect = 2.970e-43
Identity = 103/260 (39.62%), Postives = 145/260 (55.77%), Query Frame = 1
Query:   64 DEEVYHEDV-LNIERLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY-RVVEGVIEEI---PAAERAKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNH--------------IGRLLMGTDDGAATPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            DE  + ED    + R L++GD +L +YN  R+ G+   +G+LL+C  +LY+ID Y +  +G I +I   P  ER +     +A   G+       +  N H SRKWAF DI+++ KR++L R VA+E+F  DGRN+L  F +KE D  +        ++ AR+   ISG+               +  L +G   G               ++T +W + +ISNFQYLMHLNTLAGRSYNDLTQYPVFPW+L DYTS EL
Sbjct: 2512 DENAFEEDKNRKVLRSLEHGDAVLDIYNISRIIGLDACEGLLLLCKQNLYLIDSYFQTSDGEIVDIWDAPTKERDQYLQM-LASHAGYANNTPVPTKENKHKSRKWAFEDIKEVHKRKFLFRDVALEIFFADGRNYLITFFLKERDIAYN-------KLVARATFSISGSESVIGTSNTLDSKAPVTPLTIGPSTGLRFNLPSFFANSSLVELTMRWEKREISNFQYLMHLNTLAGRSYNDLTQYPVFPWILADYTSEEL 2763          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A1Y2G7B8_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G7B8_9FUNG)

HSP 1 Score: 166 bits (420), Expect = 5.510e-43
Identity = 97/244 (39.75%), Postives = 147/244 (60.25%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY------RVVEGVIEEIPAAERAK-----ASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGV-VTKLFR----RDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLL+ GD + ++YN  RV G+   +G+LL+C  ++Y+ID+Y       VV+  I E+P +ER +     AS   ++      +   D S++  H  RKW F DI+++ +RRYLLR VA+ELF  DGRN+L   ++ + D V+  ++ ++  +   +L+   G+    +   ++       LG  +  +F      DIT +W + +ISNFQYLMHLNT+AGR+YNDLTQYPVFPW+L DYTS EL
Sbjct: 2474 RLLEAGDVVYEVYNMSRVTGLDAVEGLLLLCKHNMYLIDNYFQKLDGEVVD--ISEVPESERDQYLQLLASNTPLS------QSLSDSSEVR-HQCRKWRFEDIKEVHRRRYLLRNVALELFFVDGRNYLINLNLHQRDLVYNQLASRVGSLATNNLQ--MGDRSAMVEPNSNPNQNQSSLGSKLANIFAPPSIADITTRWERHEISNFQYLMHLNTMAGRTYNDLTQYPVFPWILADYTSEEL 2706          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A077WEB2_9FUNG (Uncharacterized protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WEB2_9FUNG)

HSP 1 Score: 166 bits (420), Expect = 5.520e-43
Identity = 100/243 (41.15%), Postives = 143/243 (58.85%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY------RVVEGVIEEIPAAER-------AKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMG--TDDGAATPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLLDYGD +L +YN  ++ G+  R+G+LL+C  ++Y+ID++       VVE  I ++P  ER       AKA+G E   +    ++ GD      H SRKWA  DI++++KRR+L R VA+E+F  DGRN L     +E D ++  ++ ++    + S E I G    R +    +  G +     +       D+TH W Q +I+NFQYLM+LN +AGRSYNDLTQYPVFPWVL DY S EL
Sbjct: 2298 RLLDYGDMVLDVYNVSQIAGLDAREGLLLLCKQNIYLIDNFFQRADGEVVE--IWDVPTEERDQYLILLAKAAGMETEPMM---DQSGDL-----HTSRKWANNDIKEVYKRRFLFRDVALEIFFGDGRNALITVAKEERDELYSKLASRVTLFES-STESIIGAAGEREMAANVSSFGGSFKLSSLFGSSTLNDLTHMWQQREITNFQYLMYLNAIAGRSYNDLTQYPVFPWVLADYKSKEL 2529          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: UPI0014031AC9 (WD repeat and FYVE domain-containing protein 3 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014031AC9)

HSP 1 Score: 166 bits (419), Expect = 7.510e-43
Identity = 95/232 (40.95%), Postives = 135/232 (58.19%), Query Frame = 1
Query:  103 RLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDYRVVEGV----IEEIPAAERAKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            RLL+ G+KI  +Y C RV G+   +G+LL    H Y+ID + V        I+ +PA+E+          +   G  +G C         K+A+ D+R++ KRRYLL+ +AIE+FS+DGRN+L  F     + V +     +P + A S E +SG      + GT         G+++ L+ + +T +W +G+ISNFQYLMHLNTLAGRSYNDL QYPVFPW+L DY S EL
Sbjct: 2554 RLLEEGEKICHLYRCARVQGLDTSEGLLLFGKEHFYVIDGFTVTATREICDIDHLPASEQDA--------IIPKGSRQGPCQ--LKRTCSKFAYEDVREVHKRRYLLQPIAIEVFSSDGRNYLLAFPRGIRNKVHQRFLSVVPSL-ADSSESVSGQRPNTSVEGT---------GLLSTLWEKSVTQRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEEL 2765          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: A0A1Y1XY04_9FUNG (Beach-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XY04_9FUNG)

HSP 1 Score: 165 bits (418), Expect = 1.000e-42
Identity = 107/268 (39.93%), Postives = 150/268 (55.97%), Query Frame = 1
Query:   22 EFSVEEEEQLHSSADEEVYHEDV-LNIERLLDYGDKILKMYNCGRVDGMIKRDGVLLICTGHLYMIDDY-RVVEGVIEEI---PAAERAKASGAEVAGVCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGVVTKLFR--------RDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            EFS E  +  H    E +  ED    I R+L+ GD  L +YN  R+  +   +G+L+I   H+Y+ID+Y +  +G I +I   PA ER       +  +  + E +    D   H  RKWAF DI+++ KR++L R VAIE+F NDGRN+L   ++ + DTV+        R+ AR    +S N     + GT        L + +KL           ++T +W + +ISNFQYLMHLNTLAGRSYNDLTQYP+FPW+L DYTS EL
Sbjct: 1848 EFSSETSQSSHPETAEAILEEDKNYKISRILESGDTALDIYNISRILCLDAHEGLLIIGKTHIYIIDNYFQRKDGEIVDIWTVPAQERD----IYLQTLSSNSENE---DDAKKHQHRKWAFDDIKEVHKRKFLFRDVAIEVFLNDGRNYLITLELNQRDTVYN-------RLLARLTSLVSANES---VAGTATHTDLTPLAIGSKLTNLIFGSSSLSELTSRWEKREISNFQYLMHLNTLAGRSYNDLTQYPIFPWILADYTSEEL 2098          
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Match: F0ZV35_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZV35_DICPU)

HSP 1 Score: 164 bits (414), Expect = 3.490e-42
Identity = 105/232 (45.26%), Postives = 132/232 (56.90%), Query Frame = 1
Query:  136 MYNCGRVDGMIKRDGVLLICTGHLYMIDDYRVVEGVIEEIPAAERAKASGAEVAGVCGHGEEKGDCSDING-----------HHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGRNFLFVF-DVKEVDTVFR-LVS-LKIPRVTARSLEEISGNHIGRLLMGTDDGAATPRLGVVTKLFRRD-ITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYTSAEL 786
            MYNCG VDGM K +G+L+ C  ++Y+ D Y+               K S  E++ V    EEK +   +             H+  KWA+ DIRD+ KRRYLLR VA+E+FS DGRN L V+ D    D V+  LV+ +          + I+G   G  +   DD     R    T ++R+  +T KW QGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDY S EL
Sbjct: 2594 MYNCGSVDGMDKIEGILIFCPVYMYIFDGYQ---------------KESTGEISEV----EEKINSEWLPEGSALPQKKKIIHYFLKWAYEDIRDILKRRYLLRQVALEIFSTDGRNNLIVYKDEPTRDEVYHTLVNYVSTHNTIGGDAQGITGAQTGDDM---DDRGMKDRF---TSIWRKSPLTLKWQQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWVLCDYESEEL 2800          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80956.18932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X2GQG6_9FUNG1.000e-4440.91Uncharacterized protein n=1 Tax=Hesseltinella vesi... [more]
A0A197JLQ3_9FUNG1.370e-4441.00Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A1X2H1D5_SYNRA1.170e-4340.08Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
UPI0006447EC72.180e-4345.66hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A397ITN3_9GLOM2.970e-4339.62Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A1Y2G7B8_9FUNG5.510e-4339.75Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]
A0A077WEB2_9FUNG5.520e-4341.15Uncharacterized protein n=2 Tax=Lichtheimia TaxID=... [more]
UPI0014031AC97.510e-4340.95WD repeat and FYVE domain-containing protein 3 iso... [more]
A0A1Y1XY04_9FUNG1.000e-4239.93Beach-domain-containing protein n=1 Tax=Basidiobol... [more]
F0ZV35_DICPU3.490e-4245.26Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80956contigM-pyrifera_M_contig80956:11..796 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score169.5
Seed ortholog evalue2.1e-39
Seed eggNOG ortholog78898.MVEG_00344T0
Preferred nameBPH1
KEGG koko:K22262
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006886,GO:0006914,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0019898,GO:0031090,GO:0031505,GO:0033036,GO:0033043,GO:0034613,GO:0035091,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044088,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045229,GO:0046907,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0065007,GO:0070727,GO:0071554,GO:0071555,GO:0071702,GO:0071705,GO:0071840,GO:0071852,GO:0098588,GO:0098805,GO:0098852
EggNOG free text desc.beige BEACH domain-containing protein
EggNOG OGs1GSK6@112252,3AMG3@33154,3NWIJ@4751,KOG1786@1,KOG1786@2759,KOG1788@1,KOG1788@2759
COG Functional cat.TU
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size786
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816714.211044-CDS-M-pyrifera_M_contig80956:10..7961622816714.211044-CDS-M-pyrifera_M_contig80956:10..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80956 11..796 -
1692278135.9904385-CDS-M-pyrifera_M_contig80956:10..7961692278135.9904385-CDS-M-pyrifera_M_contig80956:10..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80956 11..796 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80956.18932.1prot_M-pyrifera_M_contig80956.18932.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80956 11..796 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80956.18932.1

>prot_M-pyrifera_M_contig80956.18932.1 ID=prot_M-pyrifera_M_contig80956.18932.1|Name=mRNA_M-pyrifera_M_contig80956.18932.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
DSSDEEEEFSVEEEEQLHSSADEEVYHEDVLNIERLLDYGDKILKMYNCG
RVDGMIKRDGVLLICTGHLYMIDDYRVVEGVIEEIPAAERAKASGAEVAG
VCGHGEEKGDCSDINGHHSRKWAFVDIRDLFKRRYLLRAVAIELFSNDGR
NFLFVFDVKEVDTVFRLVSLKIPRVTARSLEEISGNHIGRLLMGTDDGAA
TPRLGVVTKLFRRDITHKWTQGQISNFQYLMHLNTLAGRSYNDLTQYPVF
PWVLCDYTSAEL
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mRNA from alignment at M-pyrifera_M_contig80956:11..796-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80956.18932.1 ID=mRNA_M-pyrifera_M_contig80956.18932.1|Name=mRNA_M-pyrifera_M_contig80956.18932.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig80956:11..796- (Macrocystis pyrifera P11B4 male)
GACTCGAGCGACGAAGAGGAGGAGTTCAGCGTAGAGGAGGAAGAGCAGCT CCACTCCTCTGCCGACGAGGAGGTCTACCACGAGGACGTGCTCAACATCG AGCGGCTGTTGGACTACGGCGACAAGATCCTCAAGATGTACAACTGCGGC CGCGTGGATGGCATGATCAAGCGCGACGGCGTGCTTCTCATCTGCACGGG CCACCTCTACATGATCGACGACTACCGCGTCGTGGAGGGCGTCATTGAGG AGATCCCCGCCGCCGAGCGCGCGAAGGCATCTGGCGCAGAGGTGGCAGGC GTCTGCGGCCACGGCGAGGAGAAGGGTGACTGCTCGGACATCAACGGCCA CCACAGCCGCAAGTGGGCCTTCGTTGACATCCGCGACCTCTTCAAGCGCC GCTACCTGCTGCGAGCAGTGGCGATCGAGCTCTTCTCCAATGACGGCCGC AACTTCCTCTTCGTCTTCGACGTGAAGGAGGTGGACACTGTGTTCCGCCT CGTCTCCCTGAAGATCCCCAGGGTGACCGCACGGTCGCTGGAGGAGATCT CTGGCAACCACATCGGTCGCCTCCTGATGGGCACCGACGACGGGGCAGCG ACGCCCCGCCTGGGCGTGGTGACGAAGCTCTTCCGCCGCGACATCACGCA CAAGTGGACACAGGGGCAGATCAGCAACTTCCAGTACCTCATGCACCTCA ACACGCTGGCAGGCCGCTCCTACAACGACCTCACGCAGTACCCGGTCTTC CCCTGGGTGCTGTGCGACTACACCAGCGCCGAGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80956:11..796-

>mRNA_M-pyrifera_M_contig80956.18932.1 ID=mRNA_M-pyrifera_M_contig80956.18932.1|Name=mRNA_M-pyrifera_M_contig80956.18932.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig80956:11..796- (Macrocystis pyrifera P11B4 male)
GACTCGAGCGACGAAGAGGAGGAGTTCAGCGTAGAGGAGGAAGAGCAGCT
CCACTCCTCTGCCGACGAGGAGGTCTACCACGAGGACGTGCTCAACATCG
AGCGGCTGTTGGACTACGGCGACAAGATCCTCAAGATGTACAACTGCGGC
CGCGTGGATGGCATGATCAAGCGCGACGGCGTGCTTCTCATCTGCACGGG
CCACCTCTACATGATCGACGACTACCGCGTCGTGGAGGGCGTCATTGAGG
AGATCCCCGCCGCCGAGCGCGCGAAGGCATCTGGCGCAGAGGTGGCAGGC
GTCTGCGGCCACGGCGAGGAGAAGGGTGACTGCTCGGACATCAACGGCCA
CCACAGCCGCAAGTGGGCCTTCGTTGACATCCGCGACCTCTTCAAGCGCC
GCTACCTGCTGCGAGCAGTGGCGATCGAGCTCTTCTCCAATGACGGCCGC
AACTTCCTCTTCGTCTTCGACGTGAAGGAGGTGGACACTGTGTTCCGCCT
CGTCTCCCTGAAGATCCCCAGGGTGACCGCACGGTCGCTGGAGGAGATCT
CTGGCAACCACATCGGTCGCCTCCTGATGGGCACCGACGACGGGGCAGCG
ACGCCCCGCCTGGGCGTGGTGACGAAGCTCTTCCGCCGCGACATCACGCA
CAAGTGGACACAGGGGCAGATCAGCAACTTCCAGTACCTCATGCACCTCA
ACACGCTGGCAGGCCGCTCCTACAACGACCTCACGCAGTACCCGGTCTTC
CCCTGGGTGCTGTGCGACTACACCAGCGCCGAGCTGGACTCGAGCGACGA
AGAGGAGGAGTTCAGCGTAGAGGAGGAAGAGCAGCTCCACTCCTCTGCCG
ACGAGGAGGTCTACCACGAGGACGTGCTCAACATCGAGCGGCTGTTGGAC
TACGGCGACAAGATCCTCAAGATGTACAACTGCGGCCGCGTGGATGGCAT
GATCAAGCGCGACGGCGTGCTTCTCATCTGCACGGGCCACCTCTACATGA
TCGACGACTACCGCGTCGTGGAGGGCGTCATTGAGGAGATCCCCGCCGCC
GAGCGCGCGAAGGCATCTGGCGCAGAGGTGGCAGGCGTCTGCGGCCACGG
CGAGGAGAAGGGTGACTGCTCGGACATCAACGGCCACCACAGCCGCAAGT
GGGCCTTCGTTGACATCCGCGACCTCTTCAAGCGCCGCTACCTGCTGCGA
GCAGTGGCGATCGAGCTCTTCTCCAATGACGGCCGCAACTTCCTCTTCGT
CTTCGACGTGAAGGAGGTGGACACTGTGTTCCGCCTCGTCTCCCTGAAGA
TCCCCAGGGTGACCGCACGGTCGCTGGAGGAGATCTCTGGCAACCACATC
GGTCGCCTCCTGATGGGCACCGACGACGGGGCAGCGACGCCCCGCCTGGG
CGTGGTGACGAAGCTCTTCCGCCGCGACATCACGCACAAGTGGACACAGG
GGCAGATCAGCAACTTCCAGTACCTCATGCACCTCAACACGCTGGCAGGC
CGCTCCTACAACGACCTCACGCAGTACCCGGTCTTCCCCTGGGTGCTGTG
CGACTACACCAGCGCCGAGCTG
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