prot_M-pyrifera_M_contig80800.18907.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80800.18907.1
Unique Nameprot_M-pyrifera_M_contig80800.18907.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A517RI04_9PLAN (Site-specific tyrosine recombinase XerC n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RI04_9PLAN)

HSP 1 Score: 201 bits (511), Expect = 4.660e-61
Identity = 104/219 (47.49%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMARR-PERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            QTW +IER+I+  G++E + ++LW  L+L  +QI +LLK V++ A+ PF+YPMF F AY G RRSE++RS + D DF+   I IRE+KR +    T R +PL   L+RV+  WF  HPGGP+T    LK+AR   +RTE   + P+ A HHFK TL +S+W V+RG+H LRHSF SN A  G + +  I EW+GH+TE M+  Y+HLFP   +  + +L
Sbjct:   59 QTWEEIERQIQ-NGVSELEHEDLWECLYLSMEQIEKLLKDVERLASFPFVYPMFCFAAYTGARRSEMIRSQVRDIDFENKVITIREKKRVRGKLSTRR-IPLSQPLERVLRLWFKNHPGGPHTFCHHLKVARSITKRTEPIALTPDEAAHHFKHTLSESEWKVVRGWHCLRHSFISNCASKG-IDQRMIDEWVGHTTEAMRRRYRHLFPSSQKDAMQML 274          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A517VFD8_9PLAN (Site-specific tyrosine recombinase XerC n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VFD8_9PLAN)

HSP 1 Score: 202 bits (514), Expect = 8.210e-60
Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 0
Query:    5 QIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAA-PLKMARRPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            +I+R+I R GLTE+Q K LW SLFL +++I ++L  ++      FIYPMFVF A+ G RRSE+LRS IEDFDFDT  + IRE+K+ K+   TFR V + P L  +M  WF+ HPGG +TI   P +++   +  E   M  + A +HFK TL    W+ IRGFHV RHSF SNLA +G V +  I EWMGH TEEM+  Y+HLFPQ  ++ I ++
Sbjct:  201 EIDRKISRNGLTEEQVKRLWESLFLKKEEICKILDGIRSLNTFSFIYPMFVFVAHTGARRSEILRSRIEDFDFDTKIVKIREKKKVKNRNITFRHVDMTPLLYDIMKCWFENHPGGQFTICDDPEEISAGLDEDELG-MSKHKAQYHFKETLARIDWSKIRGFHVFRHSFASNLASAG-VDQRVIDEWMGHQTEEMRRRYRHLFPQQRRSAIELV 413          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A847GTE6_9BACT (Site-specific integrase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GTE6_9BACT)

HSP 1 Score: 199 bits (506), Expect = 3.240e-59
Identity = 107/216 (49.54%), Postives = 136/216 (62.96%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMAR-RPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQI 215
            QTW +IER+I RGGLTE ++ ELW  LFL   +I ELL +VK++   PF+YPMFVF A+ G RRSE++RS+I+DFDF+   +LIRE+KR +    T R VPL P L   M  WF  HPGG +T     ++ R R  R     +  + AH HFKRTL  SKW  +RG+HV RHSF SN A  G + +  I  W+GH TEEM   Y+HL P   Q  I
Sbjct:  142 QTWEEIERKIARGGLTETEQTELWDCLFLTLPEIEELLGFVKQSGRWPFVYPMFVFAAHTGARRSEMVRSEIDDFDFEGGTVLIREKKRVRGKLSTRR-VPLSPLLVETMRHWFANHPGGRHTFCLDCRLPRGRKTREIGTPITRDEAHDHFKRTLAGSKWDKLRGWHVFRHSFCSNCAAKG-IDQRIINAWVGHQTEEMVRRYRHLIPNQQQEAI 355          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A5B9W9U0_9BACT (Tyrosine recombinase n=1 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9W9U0_9BACT)

HSP 1 Score: 199 bits (506), Expect = 1.110e-58
Identity = 104/216 (48.15%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMAR-RPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQI 215
            QT  +IE +++RGGL + +K+ELW SLFL   +++E L YV++ A H +IYPMF F A+ G RRSE+LRS I DFDF    +LIRE+KR K  ++T R VPL   L +VM  WFD HPGG Y+I  PLK+ + R  R ++  +  + ++HHF  T+  SKW VI G+H  RHSF SN A  G V +  I  W+GH TEEM   Y HL P   +T +
Sbjct:  195 QTRAEIEEQLKRGGLKDDEKRELWNSLFLTLPEVAEFLGYVQETARHDWIYPMFCFAAHTGARRSEILRSRIADFDFQAKSVLIREKKRVKG-RRTTRRVPLSAFLAKVMREWFDAHPGGVYSICQPLKIFKSRKSRADYVPVTVDESNHHFNATIAGSKWEVIPGWHCFRHSFASNCAARG-VDQRLINAWLGHQTEEMARRYAHLIPNVAKTAL 408          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: UPI00024724ED (tyrosine-type recombinase/integrase n=1 Tax=Singulisphaera acidiphila TaxID=466153 RepID=UPI00024724ED)

HSP 1 Score: 192 bits (489), Expect = 1.150e-58
Identity = 99/217 (45.62%), Postives = 134/217 (61.75%), Query Frame = 0
Query:    2 TWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMARRPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            +W QIER I RGGLTE + KELW  L+LD D++ E L++V++     ++YPM    AY G RRSE+ RS I D+ FD   + IR++KR K    T+R VP+H KL  V  AWF +HPGG +             R + +++  + A +H  + +K SKW V+RGFHVLRHSF SNLA + K  R  I  WMGHST+ ++  YQHL P+D Q  I +L
Sbjct:    2 SWPQIEREIARGGLTEAETKELWDCLWLDRDEVREFLEHVRQAGGPTYLYPMVCMAAYTGARRSELCRSRISDWRFDDKTVKIRQKKRDKKKMFTYRDVPIHSKLAEVATAWFADHPGGQFAFC----------RADREEVSWDTATYHLNQAIKGSKWEVVRGFHVLRHSFASNLAAANKDQRK-IDRWMGHSTD-IRWRYQHLRPEDQQEDIGIL 206          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A7C4UW41_9BACT (Site-specific integrase n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UW41_9BACT)

HSP 1 Score: 193 bits (490), Expect = 3.180e-56
Identity = 104/219 (47.49%), Postives = 139/219 (63.47%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMARRPERTEFDQMGPNVAHHHFKRTLKDSKWA-VIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            QT  +IER+I RGGL+ +Q   LW  L+L   ++  +L +VKK AA PF+YPMF FTAY G RRSE+LRS IEDFDFD   + IRE+K+ K+ + TFR VP+   L  +M AWF +HPGG  TI          ER   + + P +AH  F+  +K S W   +RG+HV RHSF SN A  G + +  I +WMGH+TEEM+  YQHLFP D    ++++
Sbjct:  212 QTRDEIERQITRGGLSPEQIAVLWECLYLRVQEVEAILSHVKK-AAQPFLYPMFCFTAYTGARRSEILRSQIEDFDFDRRMVTIREKKKSKEKKLTFRQVPISNVLAAIMKAWFAKHPGGNLTIC---------ERAS-ESVSPQMAHFWFQEAIKGSGWENKMRGWHVFRHSFASNCASKG-IDQRMIDKWMGHTTEEMRKRYQHLFPDDQHKALALV 418          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: UPI0013ED4C0B (site-specific integrase n=1 Tax=Paludisphaera soli TaxID=2712865 RepID=UPI0013ED4C0B)

HSP 1 Score: 192 bits (487), Expect = 7.890e-56
Identity = 103/209 (49.28%), Postives = 134/209 (64.11%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMAR-RPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFP 208
            QT  +IER+I RG L  + + +LWA L+L   ++ E+L++V+  A H FIYPMFVF A+ G RRSE+LRS I DFDF+    +IRE+KR K  + T R VPL P+L  VM  WF  HPGG YTI+        R  R E   +  + ++HHF R L +S+W+VIRG+HV RHSF SN A  G V +  I  WMGH TEEM+  Y+HL P
Sbjct:  195 QTRAEIERQIERGRLAPRDQDDLWACLYLTLPEVEEVLEHVRSTARHAFIYPMFVFAAHTGARRSEILRSRIADFDFEAGTAVIREKKRVKG-RWTTRRVPLSPRLAGVMRDWFAAHPGGAYTISREAGSGHGREGRPEGGTLTRDESNHHFHRALAESRWSVIRGWHVFRHSFASNCAARG-VDQRLIDAWMGHQTEEMRRRYRHLSP 401          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A847H1W9_9BACT (Site-specific integrase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847H1W9_9BACT)

HSP 1 Score: 192 bits (488), Expect = 8.160e-56
Identity = 104/219 (47.49%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMAR-RPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            QTW +IER+I RGGLT+ +  +LW  LFL   +I ELL++V+ +A  PFIYPM +F A+ G RRSE++RS+I+D DFD   +LIRE+KR +    T R VPL P L +V+  W   HPGG +T A   ++ R R  R+   Q+  + AH HFKRTL  S+W  IRG+H+ RHSF SN A  G + +  I  W+GH TEEM   Y+HL P   Q  I ++
Sbjct:  197 QTWQEIERKISRGGLTKAEVADLWDCLFLTLPEIEELLEFVRAHAKQPFIYPMVMFAAHTGARRSEMVRSEIDDIDFDGATVLIREKKRIRGKLSTRR-VPLSPFLVQVLRDWLKIHPGGRHTFALGAEVPRSRKTRSIGTQLTRDEAHDHFKRTLLGSRWERIRGWHIFRHSFCSNCAAKG-IDQRIINAWVGHQTEEMVRRYRHLIPNQQQEAIRLV 413          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A2G2KQR5_9BACT (Recombinase XerD n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2KQR5_9BACT)

HSP 1 Score: 191 bits (485), Expect = 1.490e-55
Identity = 102/219 (46.58%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    1 QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMAR-RPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            QTW +IER+++  G++ +++  LW  L+L   QI E L   K+ AA PFI+PM  F AY G RRSE++RS I D DF++  I IRE+KR +    T R VPL   L RV+  WF  HPGGP+T    +K+ R + +RTE   +  + A HHFK+T+ +SKW VIRG+H LRHSF SN A  G + +  I EW+GH+TE M+  Y+HLFP   Q  + +L
Sbjct:  196 QTWEEIERQVQ-NGISGEEQANLWNCLYLSMPQIEEFLADAKQTAAFPFIHPMVCFAAYTGARRSEIMRSHIGDIDFESKNITIREKKRIRGKLSTRR-VPLSAPLARVLRQWFKIHPGGPHTFCQSMKIERPKTKRTEPTPITRDEAAHHFKKTMSNSKWEVIRGWHCLRHSFISNCACKG-IDQRMIDEWVGHTTESMRRRYRHLFPSSQQEAMELL 411          
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Match: A0A518GYS4_9BACT (Site-specific tyrosine recombinase XerC n=1 Tax=Tautonia plasticadhaerens TaxID=2527974 RepID=A0A518GYS4_9BACT)

HSP 1 Score: 191 bits (484), Expect = 2.260e-55
Identity = 100/217 (46.08%), Postives = 134/217 (61.75%), Query Frame = 0
Query:    2 TWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFIYPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFVPLHPKLKRVMDAWFDEHPGGPYTIAAPLKMARRPERTEFDQMGPNVAHHHFKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMKTLYQHLFPQDGQTQISVL 218
            T  QIER+++RGGLTE++++E W  L+L  ++I E+L  V+ NA  PFIYPMF F A  G RR E+LRS I+DFDF+   + I+  K R+  Q   R V +HP+L+ VM  WF  HPGG +T+           + +   +  + A+HHF + LK SKW VI+GFHV RHSF S LA  G V +  I +++GH TEEMK  YQHL P  G   I  L
Sbjct:  208 TSEQIERKLKRGGLTEQERREQWDCLYLTGEEIEEVLDLVQANATAPFIYPMFAFVALTGARRGELLRSQIDDFDFEAGSVTIQGTKGRQRTQIVAREVDIHPRLRDVMTGWFAHHPGGQHTLC----------KADGSPLTVHEANHHFDQPLKGSKWQVIKGFHVFRHSFASILASRG-VDQRYIDKYLGHQTEEMKKRYQHLHPGKGGKPIDAL 413          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80800.18907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517RI04_9PLAN4.660e-6147.49Site-specific tyrosine recombinase XerC n=2 Tax=Gi... [more]
A0A517VFD8_9PLAN8.210e-6049.30Site-specific tyrosine recombinase XerC n=1 Tax=Gi... [more]
A0A847GTE6_9BACT3.240e-5949.54Site-specific integrase n=1 Tax=Candidatus Anammox... [more]
A0A5B9W9U0_9BACT1.110e-5848.15Tyrosine recombinase n=1 Tax=Aquisphaera giovannon... [more]
UPI00024724ED1.150e-5845.62tyrosine-type recombinase/integrase n=1 Tax=Singul... [more]
A0A7C4UW41_9BACT3.180e-5647.49Site-specific integrase n=1 Tax=Gemmataceae bacter... [more]
UPI0013ED4C0B7.890e-5649.28site-specific integrase n=1 Tax=Paludisphaera soli... [more]
A0A847H1W9_9BACT8.160e-5647.49Site-specific integrase n=1 Tax=Candidatus Anammox... [more]
A0A2G2KQR5_9BACT1.490e-5546.58Recombinase XerD n=1 Tax=Blastopirellula sp. TaxID... [more]
A0A518GYS4_9BACT2.260e-5546.08Site-specific tyrosine recombinase XerC n=1 Tax=Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 25..219
e-value: 1.2E-26
score: 95.4
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 28..207
e-value: 7.9E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR30349:SF64TYROSINE RECOMBINASE XERDcoord: 17..215
NoneNo IPR availablePANTHERPTHR30349PHAGE INTEGRASE-RELATEDcoord: 17..215
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 28..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80800contigM-pyrifera_M_contig80800:44..703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80800.18907.1mRNA_M-pyrifera_M_contig80800.18907.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80800 44..703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80800.18907.1 ID=prot_M-pyrifera_M_contig80800.18907.1|Name=mRNA_M-pyrifera_M_contig80800.18907.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
QTWTQIERRIRRGGLTEKQKKELWASLFLDEDQISELLKYVKKNAAHPFI
YPMFVFTAYAGTRRSEVLRSDIEDFDFDTNQILIRERKRRKDMQQTFRFV
PLHPKLKRVMDAWFDEHPGGPYTIAAPLKMARRPERTEFDQMGPNVAHHH
FKRTLKDSKWAVIRGFHVLRHSFGSNLARSGKVSRDTIGEWMGHSTEEMK
TLYQHLFPQDGQTQISVLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz