mRNA_M-pyrifera_M_contig8064.18876.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A6H5KW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW77_9PHAE) HSP 1 Score: 256 bits (653), Expect = 5.740e-70 Identity = 199/333 (59.76%), Postives = 231/333 (69.37%), Query Frame = 1 Query: 1 GQGMCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEVTEMTAPQQKPKRERKDGKKRQRASSAT-----AGSPRDSGEGAGTSFTIPKRKKEQKRAKAQGPPRGGASAQEGLESHKSPRVKMEGKEGKPTRDAAXXXXXXXXXXXSTRIANAPKQPRVLPRMGLGLADAAAAAEILAMRGQDVCGSRHA-RIPSKSMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKALGLKKLLHQRVQYDEASANPTSAFSPKKLLKHRLLAAHANQQQASSAPAPAP 981 GQGMCS +GF GLKA+AAN HEDVCAVCKEEG+LLCCDFCP+T+HLTCLDPPML+LP ++VQWACPACSA VEV EM+APQ KPKRERKDG+KRQR S+AT + SPR +G AG SFTIPK KK K+ + L SPR+ XXXX R+ AP++ + PR+GLGL + +R D+ GSR+ + P+K+MMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KALGLKKLLHQRVQ+DEA++NP AFSPKKLLKHRLLAA SS PAP+P Sbjct: 123 GQGMCSAIGFSGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPPDDVQWACPACSANVEVAEMSAPQLKPKRERKDGRKRQRTSNATVAVAESSSPR-AGADAGGSFTIPKLKKPGKKRNKXXXXXXXXXGEAKL----SPRIVKXXXXXXXXXXXXXXXXSSANSANRNRMMKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KALGLKKLLHQRVQHDEANSNP--AFSPKKLLKHRLLAAQQATITTSSDPAPSP 441
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: D7FS64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS64_ECTSI) HSP 1 Score: 246 bits (627), Expect = 8.190e-67 Identity = 187/316 (59.18%), Postives = 220/316 (69.62%), Query Frame = 1 Query: 1 GQGMCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEVTEMTAPQQKPKRERKDGKKRQRASSAT---AGSPRDSGEGAGTSFTIPKRKKEQKRAKAQGPPRGGASAQEGLESHKSPRVKMEGKEGKPTRDAAXXXXXXXXXXXSTRIANAPKQPRVLPRMGLGLADAAAAAEILAMRGQDVCGSRHA-RIPSKSMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKALGLKKLLHQRVQYDEASANPTSAFSPKKLLKHRLLAA 936 GQGMCS +GFPGLKA+AAN HEDVCAVCKEEG+LLCCDFC +T+HLTCLDPPML+LPS++VQWACPACSA +EV EM+APQ KPKRERKDG+KRQR S+A + SPR +G AG +FTIPK KK K+ + L SPR+ XX R+ AP++ + PR+GLGL + +R D+ GSR+ + P+K+MMSLAVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXX KALGLKKLLHQRVQ+DEA++NP AFSPKKLLKHRLLAA Sbjct: 123 GQGMCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCTSTYHLTCLDPPMLSLPSDDVQWACPACSASIEVAEMSAPQLKPKRERKDGRKRQRTSTAAVAGSSSPR-AGADAGGNFTIPKLKKPGKKRNXXXXXXXXXXGEAKL----SPRIVKXXXXXXXXXXXXXXLASSANSANRNRMVKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KALGLKKLLHQRVQHDEANSNP--AFSPKKLLKHRLLAA 423
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A1W4VIZ2_DROFC (chromodomain-helicase-DNA-binding protein 3 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VIZ2_DROFC) HSP 1 Score: 72.4 bits (176), Expect = 1.520e-9 Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 31 PGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPAC 207 P KA + S E+ C VCK+ G+LLCCD CP +HLTCLDPP+ ++P + W CP C Sbjct: 14 PQNKAKKSKLSDEEFCRVCKDGGDLLCCDSCPLVYHLTCLDPPLKSIPKGD--WTCPRC 70
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A0R3VSS9_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3VSS9_TAEAS) HSP 1 Score: 72.4 bits (176), Expect = 2.030e-9 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 61 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 225 SH+D C +C++ G +LCCD CPA HLTCL PP+ A+P N W CP C + EV Sbjct: 470 SHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A0R3X3Z5_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X3Z5_HYDTA) HSP 1 Score: 72.4 bits (176), Expect = 2.040e-9 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 61 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVE 222 SH+D C +C++ G +LCCD CPA HLTCL PP+ A+P N W CP C A+ E Sbjct: 469 SHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCEAEQE 520
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: UPI001885BB48 (autoimmune regulator n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885BB48) HSP 1 Score: 69.3 bits (168), Expect = 4.370e-9 Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 37 LKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACS 210 + A N ++D CAVCK+ G L+CCD CP HLTCLDPP+ ++PS + W C CS Sbjct: 158 IAASGQNHHNDDDCAVCKDGGELICCDGCPRAFHLTCLDPPLASVPSGS--WCCKDCS 213
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: W6UFA6_ECHGR (Nucleosome-remodeling factor subunit BPTF n=1 Tax=Echinococcus granulosus TaxID=6210 RepID=W6UFA6_ECHGR) HSP 1 Score: 71.2 bits (173), Expect = 4.480e-9 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 61 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 225 +H+D C +C++ G +LCCD CPA HLTCL PP+ A+P N W CP C + EV Sbjct: 470 AHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A068YJE0_ECHMU (Fetal alzheimer antigen falz n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068YJE0_ECHMU) HSP 1 Score: 71.2 bits (173), Expect = 4.630e-9 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 61 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 225 +H+D C +C++ G +LCCD CPA HLTCL PP+ A+P N W CP C + EV Sbjct: 470 AHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A811KH98_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KH98_9BILA) HSP 1 Score: 70.9 bits (172), Expect = 5.680e-9 Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 13 CSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSA 213 C G P K I + + C CKE G++LCCD CP+++H+ C+DPP+ LP WACP C+A Sbjct: 273 CETEGVP-KKEIEEKKGNMEYCRACKEGGSILCCDSCPSSYHVYCIDPPLEELPPSEEHWACPRCTA 338
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A7M7MCI1_VARDE (Uncharacterized protein n=9 Tax=Varroa TaxID=62624 RepID=A0A7M7MCI1_VARDE) HSP 1 Score: 70.9 bits (172), Expect = 5.890e-9 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 64 HEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPAC 207 H+D C VC + G+LLCC+ CPA +HLTCLDPP+ +PSE+ W CP C Sbjct: 333 HDDHCRVCHKLGDLLCCEQCPAVYHLTCLDPPLETVPSED--WVCPVC 378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8064.18876.1 >prot_M-pyrifera_M_contig8064.18876.1 ID=prot_M-pyrifera_M_contig8064.18876.1|Name=mRNA_M-pyrifera_M_contig8064.18876.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=579bp MCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPback to top mRNA from alignment at M-pyrifera_M_contig8064:10331..12336- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8064.18876.1 ID=mRNA_M-pyrifera_M_contig8064.18876.1|Name=mRNA_M-pyrifera_M_contig8064.18876.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2006bp|location=Sequence derived from alignment at M-pyrifera_M_contig8064:10331..12336- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8064:10331..12336- >mRNA_M-pyrifera_M_contig8064.18876.1 ID=mRNA_M-pyrifera_M_contig8064.18876.1|Name=mRNA_M-pyrifera_M_contig8064.18876.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3474bp|location=Sequence derived from alignment at M-pyrifera_M_contig8064:10331..12336- (Macrocystis pyrifera P11B4 male)back to top |