prot_M-pyrifera_M_contig8058.18869.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8058.18869.1
Unique Nameprot_M-pyrifera_M_contig8058.18869.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
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BLAST of mRNA_M-pyrifera_M_contig8058.18869.1 vs. uniprot
Match: A0A6H5JBB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.080e-29
Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 0 
Query:    1 WTFVAAVYDQKSGNATLFVDGIAVTSQTSIPQGGMAPRTGNTDGTTPPPEDKSAGNLGTSLRVGAGYSATGAADGSTGFIGVIDEAFVYGTALTVDELDYLYRAAQ 106
            WTFVAAVY+Q+ GNATL+VDG+A T+QTS+P+GG+  R  + D T       +     T+ R+GAG +A  A DGSTG IG++DE FVYGTAL+VDELDYLYRAAQ
Sbjct:  110 WTFVAAVYNQEVGNATLYVDGVAATAQTSVPEGGVFSRKQSGDNTNV--TAAAVAPFSTAFRIGAGPTAVAAGDGSTGLIGLVDEVFVYGTALSVDELDYLYRAAQ 213
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BLAST of mRNA_M-pyrifera_M_contig8058.18869.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 4.650e-28
Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 0 
Query:    1 WTFVAAVYDQKSGNATLFVDGIAVTSQTSIPQGGMAPRTGNTDGTTPPPEDKSAGNLGTSLRVGAGYSATGAADGSTGFIGVIDEAFVYGTALTVDELDYLYRAAQ 106
            W FVAAVY+Q++GNATL+VDG+A  +QTS+P+GG+  R  + D T       +     T+LR+GAG  A  A DGSTG IG +DE FVYGTAL+VDELDYLYRAAQ
Sbjct:  207 WAFVAAVYNQEAGNATLYVDGVAAMAQTSVPEGGVFSRKQSGDNTNV--TAAAVTPFSTALRIGAGPRAVAAGDGSTGLIGFVDEVFVYGTALSVDELDYLYRAAQ 310
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8058.18869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBB5_9PHAE2.080e-2959.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLK0_ECTSI4.650e-2858.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 1..107
e-value: 4.2E-15
score: 58.1
IPR001759Pentraxin-relatedPROSITEPS51828PTX_2coord: 1..108
score: 9.512
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8058contigM-pyrifera_M_contig8058:11005..11331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8058.18869.1mRNA_M-pyrifera_M_contig8058.18869.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8058 11005..11331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8058.18869.1 ID=prot_M-pyrifera_M_contig8058.18869.1|Name=mRNA_M-pyrifera_M_contig8058.18869.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
WTFVAAVYDQKSGNATLFVDGIAVTSQTSIPQGGMAPRTGNTDGTTPPPE
DKSAGNLGTSLRVGAGYSATGAADGSTGFIGVIDEAFVYGTALTVDELDY
LYRAAQVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001759Pentraxin-related
IPR013320ConA-like_dom_sf